Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04540

Experiment: Rifampicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0016 mg/ml
1,023,477	+				+1.1
1,023,477	+				-0.8
1,023,477	+				-0.0
1,023,477	+				-1.0
1,023,478	-				-0.7
1,023,478	-				-0.5
1,023,478	-				-0.4
1,023,478	-				+0.3
1,023,478	-				+0.1
1,023,478	-				-0.9
1,023,478	-				-0.0
1,023,478	-				+0.4
1,023,478	-				-0.0
1,023,505	+				-0.2
1,023,540	+				+0.4
1,023,540	+				-1.7
1,023,540	+				+0.5
1,023,541	-				+0.6
1,023,541	-				-1.5
1,023,713	+				-1.4
1,023,713	+				-0.1
1,023,760	+				+0.6
1,023,760	+				+1.2
1,023,760	+				-0.7
1,023,760	+				-0.6
1,023,761	-				-1.0
1,023,841	-		AO356_04535	0.21	+0.3
1,024,016	+		AO356_04535	0.52	-0.9
1,024,017	-		AO356_04535	0.52	-1.2
1,024,025	+		AO356_04535	0.53	-0.8
1,024,025	+		AO356_04535	0.53	+1.0
1,024,025	+		AO356_04535	0.53	+0.0
1,024,025	+		AO356_04535	0.53	-0.5
1,024,026	-		AO356_04535	0.54	-3.0
1,024,026	-		AO356_04535	0.54	-0.1
1,024,026	-		AO356_04535	0.54	-0.3
1,024,121	+		AO356_04535	0.71	-1.4
1,024,121	+		AO356_04535	0.71	-0.4
1,024,121	+		AO356_04535	0.71	-0.0
1,024,121	+		AO356_04535	0.71	+0.5
1,024,122	-		AO356_04535	0.71	+0.4
1,024,122	-		AO356_04535	0.71	-0.1
1,024,283	+				-0.7
1,024,283	+				-0.2
1,024,283	+				-0.5
1,024,283	+				+0.9
1,024,283	+				+0.6
1,024,283	+				-0.7
1,024,284	-				-0.5
1,024,284	-				+0.6
1,024,284	-				+0.2
1,024,284	-				+0.0
1,024,284	-				-1.6
1,024,284	-				-1.1
1,024,284	-				-0.8
1,024,284	-				+0.2
1,024,284	-				-0.5
1,024,398	+		AO356_04540	0.22	+0.4
1,024,398	+		AO356_04540	0.22	-0.1
1,024,398	+		AO356_04540	0.22	-1.1
1,024,398	+		AO356_04540	0.22	-0.3
1,024,398	+		AO356_04540	0.22	-0.2
1,024,398	+		AO356_04540	0.22	+0.6
1,024,398	+		AO356_04540	0.22	-0.6
1,024,398	+		AO356_04540	0.22	-0.2
1,024,399	-		AO356_04540	0.22	-0.8
1,024,399	-		AO356_04540	0.22	-0.4
1,024,399	-		AO356_04540	0.22	+0.2
1,024,404	+		AO356_04540	0.23	-0.3
1,024,405	-		AO356_04540	0.23	+1.1
1,024,461	+		AO356_04540	0.35	+0.1
1,024,461	+		AO356_04540	0.35	-2.2
1,024,638	+		AO356_04540	0.72	-0.2
1,024,638	+		AO356_04540	0.72	+0.1
1,024,639	-		AO356_04540	0.72	-0.4
1,024,639	-		AO356_04540	0.72	-0.2
1,024,786	-				+0.2
1,024,829	+				+0.1
1,024,840	-				-0.3
1,024,902	+				+0.6
1,024,902	+				-0.7
1,024,903	-				-0.0
1,025,134	-		AO356_04545	0.22	+0.1
1,025,134	-		AO356_04545	0.22	-0.6
1,025,211	+		AO356_04545	0.29	+0.4
1,025,211	+		AO356_04545	0.29	-0.2
1,025,212	-		AO356_04545	0.29	-0.6
1,025,259	+		AO356_04545	0.33	+0.3
1,025,260	-		AO356_04545	0.34	+1.3
1,025,260	-		AO356_04545	0.34	+0.8
1,025,289	+		AO356_04545	0.36	-0.3
1,025,289	+		AO356_04545	0.36	-0.2
1,025,289	+		AO356_04545	0.36	-0.4
1,025,289	+		AO356_04545	0.36	+1.4
1,025,289	+		AO356_04545	0.36	+0.2
1,025,289	+		AO356_04545	0.36	+0.5
1,025,289	+		AO356_04545	0.36	+0.6
1,025,290	-		AO356_04545	0.36	-0.3
1,025,290	-		AO356_04545	0.36	-1.4
1,025,290	-		AO356_04545	0.36	-1.5
1,025,290	-		AO356_04545	0.36	-0.8
1,025,290	-		AO356_04545	0.36	-0.8
1,025,337	+		AO356_04545	0.41	+1.4
1,025,337	+		AO356_04545	0.41	-0.4
1,025,338	-		AO356_04545	0.41	+0.7
1,025,403	+		AO356_04545	0.47	-0.4
1,025,403	+		AO356_04545	0.47	-0.1
1,025,478	+		AO356_04545	0.54	+0.6
1,025,478	+		AO356_04545	0.54	+0.7
1,025,478	+		AO356_04545	0.54	-0.4
1,025,479	-		AO356_04545	0.54	+0.2
1,025,479	-		AO356_04545	0.54	-0.4
1,025,621	+		AO356_04545	0.67	+0.6
1,025,622	-		AO356_04545	0.67	+0.3
1,025,630	+		AO356_04545	0.68	-1.7
1,025,630	+		AO356_04545	0.68	-0.2
1,025,630	+		AO356_04545	0.68	-1.1
1,025,630	+		AO356_04545	0.68	-0.7
1,025,631	-		AO356_04545	0.68	-0.2
1,025,631	-		AO356_04545	0.68	-0.2
1,025,631	-		AO356_04545	0.68	-0.3
1,025,712	-		AO356_04545	0.76	-1.0
1,025,720	-		AO356_04545	0.76	+0.5
1,025,720	-		AO356_04545	0.76	-0.3
1,025,720	-		AO356_04545	0.76	-0.6