Experiment: MoYLS4 with Ceftazidime 0.6 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2195 and DvMF_2196 are separated by 184 nucleotides DvMF_2196 and DvMF_2197 are separated by 453 nucleotides
DvMF_2195: DvMF_2195 - hypothetical protein (RefSeq), at 2,741,701 to 2,742,951
_2195
DvMF_2196: DvMF_2196 - FAD linked oxidase domain protein (RefSeq), at 2,743,136 to 2,745,964
_2196
DvMF_2197: DvMF_2197 - protein of unknown function DUF805 (RefSeq), at 2,746,418 to 2,747,458
_2197
Position (kb)
2743
2744
2745
2746 Strain fitness (log2 ratio)
-1
0
1 at 2742.397 kb on + strand, within DvMF_2195 at 2742.769 kb on + strand, within DvMF_2195 at 2742.769 kb on - strand, within DvMF_2195 at 2742.815 kb on + strand, within DvMF_2195 at 2742.823 kb on - strand, within DvMF_2195 at 2742.975 kb on + strand at 2743.030 kb on - strand at 2743.308 kb on - strand at 2743.687 kb on - strand, within DvMF_2196 at 2743.728 kb on - strand, within DvMF_2196 at 2743.901 kb on - strand, within DvMF_2196 at 2744.006 kb on - strand, within DvMF_2196 at 2744.185 kb on + strand, within DvMF_2196 at 2744.551 kb on + strand, within DvMF_2196 at 2744.694 kb on + strand, within DvMF_2196 at 2744.921 kb on - strand, within DvMF_2196 at 2745.039 kb on - strand, within DvMF_2196 at 2745.042 kb on - strand, within DvMF_2196 at 2745.431 kb on + strand, within DvMF_2196 at 2745.431 kb on + strand, within DvMF_2196 at 2745.439 kb on - strand, within DvMF_2196 at 2745.439 kb on - strand, within DvMF_2196 at 2745.478 kb on + strand, within DvMF_2196 at 2745.486 kb on - strand, within DvMF_2196 at 2745.571 kb on - strand, within DvMF_2196 at 2746.105 kb on + strand at 2746.110 kb on + strand at 2746.113 kb on - strand at 2746.118 kb on - strand at 2746.271 kb on - strand at 2746.416 kb on + strand at 2746.434 kb on + strand at 2746.519 kb on + strand at 2746.885 kb on + strand, within DvMF_2197
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Ceftazidime 0.6 mg/ml remove 2,742,397 + DvMF_2195 0.56 -0.3 2,742,769 + DvMF_2195 0.85 -1.1 2,742,769 - DvMF_2195 0.85 -0.4 2,742,815 + DvMF_2195 0.89 -1.0 2,742,823 - DvMF_2195 0.90 -1.4 2,742,975 + -0.6 2,743,030 - -0.2 2,743,308 - -1.6 2,743,687 - DvMF_2196 0.19 +0.4 2,743,728 - DvMF_2196 0.21 +0.8 2,743,901 - DvMF_2196 0.27 -0.5 2,744,006 - DvMF_2196 0.31 -0.2 2,744,185 + DvMF_2196 0.37 -0.9 2,744,551 + DvMF_2196 0.50 +0.4 2,744,694 + DvMF_2196 0.55 -0.5 2,744,921 - DvMF_2196 0.63 -0.8 2,745,039 - DvMF_2196 0.67 -0.5 2,745,042 - DvMF_2196 0.67 +0.1 2,745,431 + DvMF_2196 0.81 -0.3 2,745,431 + DvMF_2196 0.81 -0.8 2,745,439 - DvMF_2196 0.81 -1.5 2,745,439 - DvMF_2196 0.81 -0.4 2,745,478 + DvMF_2196 0.83 -0.2 2,745,486 - DvMF_2196 0.83 -0.2 2,745,571 - DvMF_2196 0.86 -0.4 2,746,105 + -0.9 2,746,110 + -0.3 2,746,113 - -0.5 2,746,118 - -0.3 2,746,271 - -0.4 2,746,416 + -0.2 2,746,434 + +0.2 2,746,519 + -0.5 2,746,885 + DvMF_2197 0.45 -0.7
Or see this region's nucleotide sequence