Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1087
Experiment: MoYLS4 with Ceftazidime 0.6 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Ceftazidime 0.6 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,325,112 | + | DvMF_1086 | 0.46 | -0.3 | |
1,325,236 | + | DvMF_1086 | 0.64 | +2.1 | |
1,325,294 | + | DvMF_1086 | 0.72 | -0.3 | |
1,325,442 | + | +0.2 | |||
1,325,640 | + | +0.7 | |||
1,325,712 | + | -0.4 | |||
1,325,915 | - | -0.9 | |||
1,326,056 | + | DvMF_1087 | 0.27 | -1.0 | |
1,326,110 | - | DvMF_1087 | 0.35 | -0.4 | |
1,326,259 | - | DvMF_1087 | 0.59 | -1.4 | |
1,326,264 | + | DvMF_1087 | 0.60 | -0.8 | |
1,326,340 | + | DvMF_1087 | 0.72 | -0.7 | |
1,326,422 | - | DvMF_1087 | 0.86 | -0.5 | |
1,326,464 | - | -0.0 | |||
1,326,603 | + | +0.6 | |||
1,326,618 | + | -0.7 | |||
1,326,624 | + | -0.6 | |||
1,326,917 | - | -0.6 | |||
1,326,971 | + | DvMF_1088 | 0.11 | -0.6 | |
1,327,096 | + | DvMF_1088 | 0.16 | -1.5 | |
1,327,096 | + | DvMF_1088 | 0.16 | -0.2 | |
1,327,096 | + | DvMF_1088 | 0.16 | -0.5 | |
1,327,096 | + | DvMF_1088 | 0.16 | -0.5 | |
1,327,098 | - | DvMF_1088 | 0.16 | -0.7 | |
1,327,104 | - | DvMF_1088 | 0.16 | -0.5 | |
1,327,104 | - | DvMF_1088 | 0.16 | -0.1 | |
1,327,104 | - | DvMF_1088 | 0.16 | -0.1 | |
1,327,104 | - | DvMF_1088 | 0.16 | -0.5 | |
1,327,104 | - | DvMF_1088 | 0.16 | -1.6 | |
1,327,137 | + | DvMF_1088 | 0.18 | -0.3 |
Or see this region's nucleotide sequence