Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1026
Experiment: MoYLS4 with Ceftazidime 0.6 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Ceftazidime 0.6 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,244,304 | + | DvMF_1024 | 0.80 | -0.6 | |
1,244,309 | + | DvMF_1024 | 0.80 | -0.1 | |
1,244,382 | + | DvMF_1024 | 0.84 | +0.3 | |
1,244,418 | + | DvMF_1024 | 0.86 | +1.1 | |
1,244,467 | - | DvMF_1024 | 0.88 | +0.3 | |
1,244,488 | - | DvMF_1024 | 0.89 | +0.3 | |
1,244,488 | - | DvMF_1024 | 0.89 | +0.0 | |
1,244,677 | - | +1.2 | |||
1,244,780 | + | DvMF_1025 | 0.13 | -0.3 | |
1,244,947 | - | DvMF_1025 | 0.44 | +0.4 | |
1,245,165 | - | DvMF_1025 | 0.83 | +0.3 | |
1,245,500 | - | DvMF_1026 | 0.39 | +0.1 | |
1,245,677 | + | DvMF_1026 | 0.69 | +0.4 | |
1,245,695 | - | DvMF_1026 | 0.72 | +0.3 | |
1,245,721 | + | DvMF_1026 | 0.76 | +0.1 | |
1,245,738 | - | DvMF_1026 | 0.79 | -0.4 | |
1,245,802 | - | DvMF_1026 | 0.89 | +0.1 | |
1,245,917 | + | +0.2 | |||
1,245,925 | - | +1.4 | |||
1,245,975 | - | +0.4 | |||
1,246,133 | + | DvMF_1027 | 0.14 | +0.3 | |
1,246,165 | + | DvMF_1027 | 0.16 | +0.2 | |
1,246,301 | + | DvMF_1027 | 0.25 | +0.5 | |
1,246,448 | + | DvMF_1027 | 0.33 | +0.1 |
Or see this region's nucleotide sequence