Experiment: MoYLS4 with Ceftazidime 0.6 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0660 and DvMF_0661 are separated by 84 nucleotides DvMF_0661 and DvMF_0662 are separated by 86 nucleotides
DvMF_0660: DvMF_0660 - Patatin (RefSeq), at 795,804 to 796,769
_0660
DvMF_0661: DvMF_0661 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 796,854 to 798,914
_0661
DvMF_0662: DvMF_0662 - Coenzyme F390 synthetase-like protein (RefSeq), at 799,001 to 800,278
_0662
Position (kb) 796
797
798
799 Strain fitness (log2 ratio) -1
0
1
2 at 795.964 kb on - strand, within DvMF_0660 at 796.281 kb on - strand, within DvMF_0660 at 796.401 kb on - strand, within DvMF_0660 at 796.494 kb on - strand, within DvMF_0660 at 796.846 kb on + strand at 797.007 kb on - strand at 797.232 kb on + strand, within DvMF_0661 at 797.308 kb on + strand, within DvMF_0661 at 797.456 kb on - strand, within DvMF_0661 at 797.666 kb on + strand, within DvMF_0661 at 798.238 kb on + strand, within DvMF_0661 at 798.266 kb on + strand, within DvMF_0661 at 798.274 kb on - strand, within DvMF_0661 at 798.320 kb on - strand, within DvMF_0661 at 798.353 kb on + strand, within DvMF_0661 at 798.435 kb on - strand, within DvMF_0661 at 798.450 kb on - strand, within DvMF_0661 at 798.507 kb on + strand, within DvMF_0661 at 798.807 kb on - strand at 798.833 kb on - strand at 798.940 kb on - strand at 799.039 kb on - strand at 799.182 kb on - strand, within DvMF_0662 at 799.561 kb on - strand, within DvMF_0662 at 799.672 kb on + strand, within DvMF_0662 at 799.715 kb on - strand, within DvMF_0662 at 799.720 kb on + strand, within DvMF_0662 at 799.755 kb on + strand, within DvMF_0662
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Ceftazidime 0.6 mg/ml remove 795,964 - DvMF_0660 0.17 -0.5 796,281 - DvMF_0660 0.49 -0.0 796,401 - DvMF_0660 0.62 +0.2 796,494 - DvMF_0660 0.71 +0.7 796,846 + -0.1 797,007 - +0.1 797,232 + DvMF_0661 0.18 -0.3 797,308 + DvMF_0661 0.22 -0.6 797,456 - DvMF_0661 0.29 +2.0 797,666 + DvMF_0661 0.39 -0.5 798,238 + DvMF_0661 0.67 -0.7 798,266 + DvMF_0661 0.69 -0.6 798,274 - DvMF_0661 0.69 -0.1 798,320 - DvMF_0661 0.71 -0.5 798,353 + DvMF_0661 0.73 +2.1 798,435 - DvMF_0661 0.77 +0.5 798,450 - DvMF_0661 0.77 -0.5 798,507 + DvMF_0661 0.80 -0.5 798,807 - -0.4 798,833 - -0.1 798,940 - -0.6 799,039 - +0.2 799,182 - DvMF_0662 0.14 -1.7 799,561 - DvMF_0662 0.44 -0.2 799,672 + DvMF_0662 0.53 -0.3 799,715 - DvMF_0662 0.56 -0.1 799,720 + DvMF_0662 0.56 -0.1 799,755 + DvMF_0662 0.59 -0.5
Or see this region's nucleotide sequence