Experiment: m.b. copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3097 and Dshi_3098 are separated by 35 nucleotides Dshi_3098 and Dshi_3099 overlap by 4 nucleotides Dshi_3099 and Dshi_3100 are separated by 16 nucleotides
Dshi_3097: Dshi_3097 - glutamate--cysteine ligase (RefSeq), at 3,264,516 to 3,265,886
_3097
Dshi_3098: Dshi_3098 - hypothetical protein (RefSeq), at 3,265,922 to 3,266,470
_3098
Dshi_3099: Dshi_3099 - protein of unknown function DUF558 (RefSeq), at 3,266,467 to 3,267,216
_3099
Dshi_3100: Dshi_3100 - 4-hydroxybenzoate polyprenyl transferase (RefSeq), at 3,267,233 to 3,268,201
_3100
Position (kb)
3266
3267
3268 Strain fitness (log2 ratio)
-1
0
1 at 3265.898 kb on - strand at 3266.332 kb on - strand, within Dshi_3098 at 3266.332 kb on - strand, within Dshi_3098 at 3266.401 kb on + strand, within Dshi_3098 at 3266.401 kb on + strand, within Dshi_3098 at 3266.401 kb on + strand, within Dshi_3098 at 3266.409 kb on - strand, within Dshi_3098 at 3266.506 kb on - strand at 3266.572 kb on - strand, within Dshi_3099 at 3266.711 kb on + strand, within Dshi_3099 at 3266.972 kb on - strand, within Dshi_3099 at 3266.998 kb on - strand, within Dshi_3099 at 3267.010 kb on - strand, within Dshi_3099 at 3267.070 kb on + strand, within Dshi_3099 at 3267.095 kb on + strand, within Dshi_3099 at 3267.185 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM remove 3,265,898 - +0.3 3,266,332 - Dshi_3098 0.75 +0.5 3,266,332 - Dshi_3098 0.75 -0.1 3,266,401 + Dshi_3098 0.87 -0.7 3,266,401 + Dshi_3098 0.87 -0.2 3,266,401 + Dshi_3098 0.87 +0.4 3,266,409 - Dshi_3098 0.89 -0.5 3,266,506 - -0.7 3,266,572 - Dshi_3099 0.14 +0.2 3,266,711 + Dshi_3099 0.33 -0.7 3,266,972 - Dshi_3099 0.67 +0.5 3,266,998 - Dshi_3099 0.71 +0.8 3,267,010 - Dshi_3099 0.72 +0.1 3,267,070 + Dshi_3099 0.80 +1.0 3,267,095 + Dshi_3099 0.84 -0.0 3,267,185 - -1.5
Or see this region's nucleotide sequence