Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2946

Experiment: m.b. copper (II) chloride 0.64 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_2944 and Dshi_2945 overlap by 4 nucleotidesDshi_2945 and Dshi_2946 overlap by 4 nucleotidesDshi_2946 and Dshi_2947 are separated by 76 nucleotides Dshi_2944: Dshi_2944 - Extensin family protein (RefSeq), at 3,103,635 to 3,104,450 _2944 Dshi_2945: Dshi_2945 - Prephenate dehydrogenase (RefSeq), at 3,104,447 to 3,105,388 _2945 Dshi_2946: Dshi_2946 - histidinol-phosphate aminotransferase (RefSeq), at 3,105,385 to 3,106,470 _2946 Dshi_2947: Dshi_2947 - Homospermidine synthase (RefSeq), at 3,106,547 to 3,107,965 _2947 Position (kb) 3105 3106 3107Strain fitness (log2 ratio) -1 0 1at 3104.507 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM
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3,104,507 + +0.6

Or see this region's nucleotide sequence