Experiment: m.b. copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2631 and Dshi_2632 are separated by 166 nucleotides Dshi_2632 and Dshi_2633 are separated by 50 nucleotides Dshi_2633 and Dshi_2634 are separated by 99 nucleotides Dshi_2634 and Dshi_2635 are separated by 27 nucleotides
Dshi_2631: Dshi_2631 - response regulator receiver protein (RefSeq), at 2,787,540 to 2,788,244
_2631
Dshi_2632: Dshi_2632 - hypothetical protein (RefSeq), at 2,788,411 to 2,788,605
_2632
Dshi_2633: Dshi_2633 - aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) (from data) , at 2,788,656 to 2,790,428
_2633
Dshi_2634: Dshi_2634 - hypothetical protein (RefSeq), at 2,790,528 to 2,790,977
_2634
Dshi_2635: Dshi_2635 - pentapeptide repeat protein (RefSeq), at 2,791,005 to 2,791,742
_2635
Position (kb)
2788
2789
2790
2791 Strain fitness (log2 ratio)
-1
0
1
2 at 2787.765 kb on - strand, within Dshi_2631 at 2787.863 kb on + strand, within Dshi_2631 at 2787.920 kb on + strand, within Dshi_2631 at 2788.019 kb on - strand, within Dshi_2631 at 2788.036 kb on - strand, within Dshi_2631 at 2788.066 kb on + strand, within Dshi_2631 at 2788.093 kb on - strand, within Dshi_2631 at 2788.385 kb on + strand at 2788.553 kb on + strand, within Dshi_2632 at 2788.578 kb on + strand, within Dshi_2632 at 2790.507 kb on - strand at 2790.527 kb on - strand at 2790.528 kb on - strand at 2790.528 kb on - strand at 2790.782 kb on + strand, within Dshi_2634 at 2790.782 kb on + strand, within Dshi_2634 at 2790.790 kb on - strand, within Dshi_2634 at 2790.790 kb on - strand, within Dshi_2634 at 2790.796 kb on + strand, within Dshi_2634 at 2790.821 kb on + strand, within Dshi_2634 at 2790.834 kb on - strand, within Dshi_2634 at 2790.987 kb on - strand at 2791.002 kb on + strand at 2791.035 kb on - strand at 2791.055 kb on - strand at 2791.129 kb on - strand, within Dshi_2635 at 2791.256 kb on + strand, within Dshi_2635 at 2791.296 kb on + strand, within Dshi_2635 at 2791.296 kb on + strand, within Dshi_2635 at 2791.296 kb on + strand, within Dshi_2635 at 2791.311 kb on - strand, within Dshi_2635 at 2791.311 kb on - strand, within Dshi_2635 at 2791.362 kb on - strand, within Dshi_2635
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM remove 2,787,765 - Dshi_2631 0.32 +0.5 2,787,863 + Dshi_2631 0.46 +0.1 2,787,920 + Dshi_2631 0.54 +1.6 2,788,019 - Dshi_2631 0.68 +2.4 2,788,036 - Dshi_2631 0.70 -0.3 2,788,066 + Dshi_2631 0.75 -0.5 2,788,093 - Dshi_2631 0.78 +1.5 2,788,385 + -0.4 2,788,553 + Dshi_2632 0.73 -0.4 2,788,578 + Dshi_2632 0.86 -1.1 2,790,507 - +2.4 2,790,527 - -1.5 2,790,528 - +0.0 2,790,528 - +0.9 2,790,782 + Dshi_2634 0.56 -0.2 2,790,782 + Dshi_2634 0.56 -0.8 2,790,790 - Dshi_2634 0.58 +1.0 2,790,790 - Dshi_2634 0.58 -1.3 2,790,796 + Dshi_2634 0.60 -0.2 2,790,821 + Dshi_2634 0.65 +0.2 2,790,834 - Dshi_2634 0.68 -0.5 2,790,987 - -0.3 2,791,002 + -0.5 2,791,035 - -0.2 2,791,055 - +0.3 2,791,129 - Dshi_2635 0.17 +0.4 2,791,256 + Dshi_2635 0.34 -0.5 2,791,296 + Dshi_2635 0.39 +0.6 2,791,296 + Dshi_2635 0.39 +0.8 2,791,296 + Dshi_2635 0.39 +0.2 2,791,311 - Dshi_2635 0.41 -0.4 2,791,311 - Dshi_2635 0.41 +0.0 2,791,362 - Dshi_2635 0.48 -0.5
Or see this region's nucleotide sequence