Experiment: m.b. copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1733 and Dshi_1734 are separated by 251 nucleotides Dshi_1734 and Dshi_1735 are separated by 51 nucleotides Dshi_1735 and Dshi_1736 are separated by 3 nucleotides Dshi_1736 and Dshi_1737 are separated by 1 nucleotides
Dshi_1733: Dshi_1733 - peptide chain release factor 1 (RefSeq), at 1,799,734 to 1,800,789
_1733
Dshi_1734: Dshi_1734 - hypothetical protein (RefSeq), at 1,801,041 to 1,801,505
_1734
Dshi_1735: Dshi_1735 - putative agmatinase (RefSeq), at 1,801,557 to 1,802,531
_1735
Dshi_1736: Dshi_1736 - protein of unknown function DUF710 (RefSeq), at 1,802,535 to 1,802,939
_1736
Dshi_1737: Dshi_1737 - hypothetical protein (RefSeq), at 1,802,941 to 1,803,369
_1737
Position (kb)
1801
1802
1803 Strain fitness (log2 ratio)
-1
0
1 at 1800.821 kb on + strand at 1801.125 kb on + strand, within Dshi_1734 at 1801.240 kb on - strand, within Dshi_1734 at 1801.361 kb on - strand, within Dshi_1734 at 1801.474 kb on + strand at 1801.518 kb on + strand at 1801.521 kb on - strand at 1801.521 kb on - strand at 1801.568 kb on - strand at 1801.578 kb on - strand at 1801.585 kb on - strand at 1801.755 kb on - strand, within Dshi_1735 at 1801.784 kb on + strand, within Dshi_1735 at 1801.818 kb on + strand, within Dshi_1735 at 1801.837 kb on + strand, within Dshi_1735 at 1801.991 kb on + strand, within Dshi_1735 at 1802.532 kb on + strand at 1802.613 kb on - strand, within Dshi_1736 at 1802.912 kb on + strand at 1803.096 kb on + strand, within Dshi_1737 at 1803.201 kb on - strand, within Dshi_1737 at 1803.397 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM remove 1,800,821 + +0.6 1,801,125 + Dshi_1734 0.18 +0.9 1,801,240 - Dshi_1734 0.43 +0.7 1,801,361 - Dshi_1734 0.69 +1.5 1,801,474 + -0.3 1,801,518 + +0.9 1,801,521 - -0.3 1,801,521 - -1.1 1,801,568 - -0.3 1,801,578 - -0.1 1,801,585 - -0.1 1,801,755 - Dshi_1735 0.20 -0.3 1,801,784 + Dshi_1735 0.23 +1.0 1,801,818 + Dshi_1735 0.27 -0.6 1,801,837 + Dshi_1735 0.29 +0.9 1,801,991 + Dshi_1735 0.45 +1.2 1,802,532 + -1.7 1,802,613 - Dshi_1736 0.19 -1.7 1,802,912 + +0.3 1,803,096 + Dshi_1737 0.36 -0.1 1,803,201 - Dshi_1737 0.61 -1.4 1,803,397 - -1.1
Or see this region's nucleotide sequence