Experiment: m.b. copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1729 and Dshi_1730 are separated by 43 nucleotides Dshi_1730 and Dshi_1731 are separated by 62 nucleotides Dshi_1731 and Dshi_1732 are separated by 254 nucleotides
Dshi_1729: Dshi_1729 - putative deoxyguanosinetriphosphate triphosphohydrolase (RefSeq), at 1,796,409 to 1,797,608
_1729
Dshi_1730: Dshi_1730 - iron-sulfur cluster assembly accessory protein (RefSeq), at 1,797,652 to 1,797,984
_1730
Dshi_1731: Dshi_1731 - hypothetical protein (RefSeq), at 1,798,047 to 1,798,658
_1731
Dshi_1732: Dshi_1732 - modification methylase, HemK family (RefSeq), at 1,798,913 to 1,799,737
_1732
Position (kb)
1798
1799 Strain fitness (log2 ratio)
-1
0
1 at 1797.077 kb on - strand, within Dshi_1729 at 1797.130 kb on - strand, within Dshi_1729 at 1797.151 kb on - strand, within Dshi_1729 at 1797.260 kb on - strand, within Dshi_1729 at 1797.307 kb on + strand, within Dshi_1729 at 1797.317 kb on + strand, within Dshi_1729 at 1797.358 kb on + strand, within Dshi_1729 at 1797.358 kb on + strand, within Dshi_1729 at 1797.368 kb on + strand, within Dshi_1729 at 1797.437 kb on - strand, within Dshi_1729 at 1798.281 kb on - strand, within Dshi_1731
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM remove 1,797,077 - Dshi_1729 0.56 -0.6 1,797,130 - Dshi_1729 0.60 -0.3 1,797,151 - Dshi_1729 0.62 +0.4 1,797,260 - Dshi_1729 0.71 -0.1 1,797,307 + Dshi_1729 0.75 +0.9 1,797,317 + Dshi_1729 0.76 -0.3 1,797,358 + Dshi_1729 0.79 +0.5 1,797,358 + Dshi_1729 0.79 +0.0 1,797,368 + Dshi_1729 0.80 +1.6 1,797,437 - Dshi_1729 0.86 +0.3 1,798,281 - Dshi_1731 0.38 -1.4
Or see this region's nucleotide sequence