Experiment: m.b. copper (II) chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1209 and Dshi_1210 are separated by 208 nucleotides Dshi_1210 and Dshi_1211 are separated by 12 nucleotides Dshi_1211 and Dshi_1212 overlap by 4 nucleotides
Dshi_1209: Dshi_1209 - putative integral membrane sensor protein (RefSeq), at 1,247,697 to 1,248,803
_1209
Dshi_1210: Dshi_1210 - molybdopterin dehydrogenase FAD-binding (RefSeq), at 1,249,012 to 1,249,866
_1210
Dshi_1211: Dshi_1211 - (2Fe-2S)-binding domain protein (RefSeq), at 1,249,879 to 1,250,370
_1211
Dshi_1212: Dshi_1212 - carbon-monoxide dehydrogenase, large subunit (RefSeq), at 1,250,367 to 1,252,787
_1212
Position (kb)
1249
1250 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1248.042 kb on - strand, within Dshi_1209 at 1248.147 kb on - strand, within Dshi_1209 at 1248.276 kb on + strand, within Dshi_1209 at 1248.382 kb on + strand, within Dshi_1209 at 1248.495 kb on - strand, within Dshi_1209 at 1248.541 kb on - strand, within Dshi_1209 at 1248.716 kb on + strand at 1248.788 kb on + strand at 1249.019 kb on - strand at 1249.433 kb on - strand, within Dshi_1210 at 1249.543 kb on + strand, within Dshi_1210 at 1249.660 kb on - strand, within Dshi_1210 at 1249.660 kb on - strand, within Dshi_1210 at 1249.707 kb on - strand, within Dshi_1210 at 1249.833 kb on - strand at 1249.866 kb on + strand at 1249.893 kb on + strand at 1249.963 kb on - strand, within Dshi_1211 at 1250.001 kb on - strand, within Dshi_1211 at 1250.066 kb on - strand, within Dshi_1211 at 1250.082 kb on + strand, within Dshi_1211 at 1250.090 kb on - strand, within Dshi_1211 at 1250.280 kb on + strand, within Dshi_1211 at 1250.418 kb on + strand at 1250.418 kb on + strand at 1250.426 kb on - strand at 1250.532 kb on + strand at 1250.536 kb on + strand at 1250.626 kb on - strand, within Dshi_1212 at 1250.712 kb on - strand, within Dshi_1212 at 1250.755 kb on + strand, within Dshi_1212 at 1250.773 kb on - strand, within Dshi_1212
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.64 mM remove 1,248,042 - Dshi_1209 0.31 -0.5 1,248,147 - Dshi_1209 0.41 -0.2 1,248,276 + Dshi_1209 0.52 +0.3 1,248,382 + Dshi_1209 0.62 -0.3 1,248,495 - Dshi_1209 0.72 -0.9 1,248,541 - Dshi_1209 0.76 -0.3 1,248,716 + +0.3 1,248,788 + +0.5 1,249,019 - -2.1 1,249,433 - Dshi_1210 0.49 +2.4 1,249,543 + Dshi_1210 0.62 -1.1 1,249,660 - Dshi_1210 0.76 -0.1 1,249,660 - Dshi_1210 0.76 -0.5 1,249,707 - Dshi_1210 0.81 -0.2 1,249,833 - -0.2 1,249,866 + -0.6 1,249,893 + -0.6 1,249,963 - Dshi_1211 0.17 -1.1 1,250,001 - Dshi_1211 0.25 -0.1 1,250,066 - Dshi_1211 0.38 -0.0 1,250,082 + Dshi_1211 0.41 -0.2 1,250,090 - Dshi_1211 0.43 -0.3 1,250,280 + Dshi_1211 0.82 -0.5 1,250,418 + +0.0 1,250,418 + -0.5 1,250,426 - +0.2 1,250,532 + +0.1 1,250,536 + +1.8 1,250,626 - Dshi_1212 0.11 +0.7 1,250,712 - Dshi_1212 0.14 +1.0 1,250,755 + Dshi_1212 0.16 +0.6 1,250,773 - Dshi_1212 0.17 +0.3
Or see this region's nucleotide sequence