Experiment: KB with Flavone 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4129 and Psyr_4130 are separated by 111 nucleotides Psyr_4130 and Psyr_4131 are separated by 904 nucleotides
Psyr_4129: Psyr_4129 - Protein of unknown function DUF34, at 4,918,306 to 4,919,064
_4129
Psyr_4130: Psyr_4130 - Peptidase S1, chymotrypsin:PDZ/DHR/GLGF, at 4,919,176 to 4,920,336
_4130
Psyr_4131: Psyr_4131 - Transposase, IS111A/IS1328/IS1533:Transposase IS116/IS110/IS902, at 4,921,241 to 4,922,170
_4131
Position (kb) 4919
4920
4921 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4918.230 kb on + strand at 4918.230 kb on + strand at 4918.231 kb on - strand at 4918.231 kb on - strand at 4918.231 kb on - strand at 4918.279 kb on + strand at 4918.279 kb on + strand at 4918.280 kb on - strand at 4918.280 kb on - strand at 4918.285 kb on + strand at 4918.285 kb on + strand at 4918.285 kb on + strand at 4918.286 kb on - strand at 4918.335 kb on + strand at 4918.335 kb on + strand at 4918.335 kb on + strand at 4918.335 kb on + strand at 4918.335 kb on + strand at 4918.335 kb on + strand at 4918.336 kb on - strand at 4918.336 kb on - strand at 4918.336 kb on - strand at 4918.336 kb on - strand at 4918.365 kb on - strand at 4918.365 kb on - strand at 4918.365 kb on - strand at 4918.446 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.517 kb on + strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.518 kb on - strand, within Psyr_4129 at 4918.772 kb on + strand, within Psyr_4129 at 4918.772 kb on + strand, within Psyr_4129 at 4918.773 kb on - strand, within Psyr_4129 at 4918.828 kb on - strand, within Psyr_4129 at 4918.862 kb on + strand, within Psyr_4129 at 4918.994 kb on + strand at 4918.994 kb on + strand at 4918.994 kb on + strand at 4919.022 kb on - strand at 4919.064 kb on + strand at 4919.065 kb on - strand at 4919.075 kb on + strand at 4919.075 kb on + strand at 4919.075 kb on + strand at 4919.075 kb on + strand at 4919.075 kb on + strand at 4919.075 kb on + strand at 4919.076 kb on - strand at 4919.076 kb on - strand at 4919.076 kb on - strand at 4919.079 kb on + strand at 4919.079 kb on + strand at 4919.079 kb on + strand at 4919.079 kb on + strand at 4919.079 kb on + strand at 4919.079 kb on + strand at 4919.079 kb on + strand at 4919.080 kb on - strand at 4919.080 kb on - strand at 4919.101 kb on + strand at 4919.101 kb on + strand at 4919.102 kb on - strand at 4919.102 kb on - strand at 4919.102 kb on - strand at 4919.107 kb on + strand at 4919.107 kb on + strand at 4919.107 kb on + strand at 4919.107 kb on + strand at 4919.107 kb on + strand at 4919.107 kb on + strand at 4919.107 kb on + strand at 4919.107 kb on + strand at 4919.107 kb on + strand at 4919.108 kb on - strand at 4919.108 kb on - strand at 4919.108 kb on - strand at 4919.108 kb on - strand at 4919.108 kb on - strand at 4919.108 kb on - strand at 4919.108 kb on - strand at 4919.108 kb on - strand at 4919.108 kb on - strand at 4919.108 kb on - strand at 4919.109 kb on + strand at 4919.109 kb on + strand at 4919.109 kb on + strand at 4919.110 kb on - strand at 4919.110 kb on - strand at 4919.173 kb on + strand at 4919.173 kb on + strand at 4919.173 kb on + strand at 4919.173 kb on + strand at 4919.242 kb on - strand at 4919.338 kb on + strand, within Psyr_4130 at 4919.338 kb on + strand, within Psyr_4130 at 4919.338 kb on + strand, within Psyr_4130 at 4919.338 kb on + strand, within Psyr_4130 at 4919.338 kb on + strand, within Psyr_4130 at 4919.339 kb on - strand, within Psyr_4130 at 4919.383 kb on + strand, within Psyr_4130 at 4919.383 kb on + strand, within Psyr_4130 at 4919.383 kb on + strand, within Psyr_4130 at 4919.383 kb on + strand, within Psyr_4130 at 4919.384 kb on - strand, within Psyr_4130 at 4919.384 kb on - strand, within Psyr_4130 at 4919.384 kb on - strand, within Psyr_4130 at 4919.386 kb on - strand, within Psyr_4130 at 4919.524 kb on + strand, within Psyr_4130 at 4919.524 kb on + strand, within Psyr_4130 at 4919.524 kb on + strand, within Psyr_4130 at 4919.524 kb on + strand, within Psyr_4130 at 4919.524 kb on + strand, within Psyr_4130 at 4919.525 kb on - strand, within Psyr_4130 at 4919.525 kb on - strand, within Psyr_4130 at 4919.525 kb on - strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.528 kb on + strand, within Psyr_4130 at 4919.529 kb on - strand, within Psyr_4130 at 4919.529 kb on - strand, within Psyr_4130 at 4919.529 kb on - strand, within Psyr_4130 at 4919.529 kb on - strand, within Psyr_4130 at 4919.529 kb on - strand, within Psyr_4130 at 4919.529 kb on - strand, within Psyr_4130 at 4919.529 kb on - strand, within Psyr_4130 at 4919.529 kb on - strand, within Psyr_4130 at 4919.529 kb on - strand, within Psyr_4130 at 4919.809 kb on + strand, within Psyr_4130 at 4919.809 kb on + strand, within Psyr_4130 at 4919.809 kb on + strand, within Psyr_4130 at 4919.809 kb on + strand, within Psyr_4130 at 4919.809 kb on + strand, within Psyr_4130 at 4919.809 kb on + strand, within Psyr_4130 at 4919.809 kb on + strand, within Psyr_4130 at 4919.809 kb on + strand, within Psyr_4130 at 4919.809 kb on + strand, within Psyr_4130 at 4919.810 kb on - strand, within Psyr_4130 at 4919.810 kb on - strand, within Psyr_4130 at 4919.810 kb on - strand, within Psyr_4130 at 4919.810 kb on - strand, within Psyr_4130 at 4919.810 kb on - strand, within Psyr_4130 at 4919.810 kb on - strand, within Psyr_4130 at 4919.901 kb on + strand, within Psyr_4130 at 4920.345 kb on + strand at 4920.345 kb on + strand at 4920.360 kb on + strand at 4920.360 kb on + strand at 4920.361 kb on - strand at 4920.388 kb on - strand at 4920.455 kb on - strand at 4920.457 kb on - strand at 4920.457 kb on - strand at 4920.457 kb on - strand at 4920.457 kb on - strand at 4920.457 kb on - strand at 4920.459 kb on - strand at 4920.459 kb on - strand at 4920.459 kb on - strand at 4921.117 kb on + strand at 4921.117 kb on + strand at 4921.117 kb on + strand at 4921.189 kb on + strand at 4921.190 kb on - strand at 4921.190 kb on - strand at 4921.190 kb on - strand at 4921.190 kb on - strand at 4921.190 kb on - strand at 4921.190 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Flavone 0.25 mg/ml remove 4,918,230 + +1.3 4,918,230 + +0.4 4,918,231 - +2.7 4,918,231 - -0.5 4,918,231 - -1.8 4,918,279 + +2.0 4,918,279 + +2.1 4,918,280 - -1.0 4,918,280 - +0.4 4,918,285 + -0.8 4,918,285 + -0.1 4,918,285 + -0.9 4,918,286 - -1.4 4,918,335 + -0.9 4,918,335 + +0.4 4,918,335 + +0.3 4,918,335 + +1.5 4,918,335 + -0.7 4,918,335 + +0.4 4,918,336 - -0.0 4,918,336 - -1.7 4,918,336 - -0.0 4,918,336 - +1.2 4,918,365 - +1.4 4,918,365 - -0.1 4,918,365 - +0.4 4,918,446 + Psyr_4129 0.18 +1.4 4,918,517 + Psyr_4129 0.28 -1.0 4,918,517 + Psyr_4129 0.28 +2.1 4,918,517 + Psyr_4129 0.28 -1.3 4,918,517 + Psyr_4129 0.28 -0.1 4,918,517 + Psyr_4129 0.28 +0.2 4,918,517 + Psyr_4129 0.28 +0.8 4,918,517 + Psyr_4129 0.28 -0.3 4,918,517 + Psyr_4129 0.28 -1.6 4,918,517 + Psyr_4129 0.28 -0.5 4,918,517 + Psyr_4129 0.28 +0.2 4,918,517 + Psyr_4129 0.28 +1.2 4,918,517 + Psyr_4129 0.28 +1.1 4,918,517 + Psyr_4129 0.28 +0.3 4,918,518 - Psyr_4129 0.28 +0.6 4,918,518 - Psyr_4129 0.28 +0.3 4,918,518 - Psyr_4129 0.28 +0.0 4,918,518 - Psyr_4129 0.28 +1.1 4,918,518 - Psyr_4129 0.28 +1.8 4,918,518 - Psyr_4129 0.28 +0.5 4,918,518 - Psyr_4129 0.28 +0.4 4,918,518 - Psyr_4129 0.28 +0.3 4,918,518 - Psyr_4129 0.28 -0.1 4,918,518 - Psyr_4129 0.28 -0.1 4,918,518 - Psyr_4129 0.28 +1.7 4,918,518 - Psyr_4129 0.28 +0.8 4,918,518 - Psyr_4129 0.28 +0.2 4,918,518 - Psyr_4129 0.28 +0.8 4,918,518 - Psyr_4129 0.28 +1.2 4,918,518 - Psyr_4129 0.28 -0.7 4,918,772 + Psyr_4129 0.61 +0.6 4,918,772 + Psyr_4129 0.61 +0.5 4,918,773 - Psyr_4129 0.62 +0.4 4,918,828 - Psyr_4129 0.69 +0.7 4,918,862 + Psyr_4129 0.73 +0.6 4,918,994 + +1.3 4,918,994 + +1.0 4,918,994 + -0.3 4,919,022 - -0.2 4,919,064 + +0.0 4,919,065 - -0.3 4,919,075 + -1.1 4,919,075 + -2.2 4,919,075 + +0.1 4,919,075 + -0.5 4,919,075 + +1.4 4,919,075 + +0.1 4,919,076 - -0.2 4,919,076 - +0.6 4,919,076 - -0.6 4,919,079 + -1.5 4,919,079 + +0.0 4,919,079 + +1.7 4,919,079 + +0.1 4,919,079 + -0.8 4,919,079 + +0.1 4,919,079 + -0.9 4,919,080 - +0.2 4,919,080 - +0.1 4,919,101 + -1.4 4,919,101 + +0.3 4,919,102 - +1.8 4,919,102 - +1.4 4,919,102 - +0.1 4,919,107 + +0.1 4,919,107 + -1.3 4,919,107 + -0.8 4,919,107 + +0.1 4,919,107 + -0.4 4,919,107 + +0.3 4,919,107 + +1.1 4,919,107 + +1.8 4,919,107 + -2.0 4,919,108 - -1.4 4,919,108 - +1.0 4,919,108 - -1.4 4,919,108 - +1.4 4,919,108 - -0.6 4,919,108 - +0.5 4,919,108 - +0.4 4,919,108 - -0.9 4,919,108 - -0.5 4,919,108 - -0.0 4,919,109 + +0.5 4,919,109 + -0.0 4,919,109 + +0.8 4,919,110 - +1.0 4,919,110 - +0.5 4,919,173 + +0.0 4,919,173 + -0.1 4,919,173 + +0.9 4,919,173 + -1.4 4,919,242 - -0.6 4,919,338 + Psyr_4130 0.14 -1.0 4,919,338 + Psyr_4130 0.14 -0.2 4,919,338 + Psyr_4130 0.14 +1.2 4,919,338 + Psyr_4130 0.14 +0.4 4,919,338 + Psyr_4130 0.14 +0.5 4,919,339 - Psyr_4130 0.14 -0.3 4,919,383 + Psyr_4130 0.18 -2.2 4,919,383 + Psyr_4130 0.18 -0.6 4,919,383 + Psyr_4130 0.18 +3.5 4,919,383 + Psyr_4130 0.18 +1.1 4,919,384 - Psyr_4130 0.18 +0.4 4,919,384 - Psyr_4130 0.18 -0.6 4,919,384 - Psyr_4130 0.18 +0.7 4,919,386 - Psyr_4130 0.18 +0.2 4,919,524 + Psyr_4130 0.30 +1.4 4,919,524 + Psyr_4130 0.30 -0.6 4,919,524 + Psyr_4130 0.30 +0.6 4,919,524 + Psyr_4130 0.30 +0.0 4,919,524 + Psyr_4130 0.30 -0.4 4,919,525 - Psyr_4130 0.30 +0.2 4,919,525 - Psyr_4130 0.30 +0.5 4,919,525 - Psyr_4130 0.30 +0.3 4,919,528 + Psyr_4130 0.30 +0.4 4,919,528 + Psyr_4130 0.30 -1.4 4,919,528 + Psyr_4130 0.30 -0.0 4,919,528 + Psyr_4130 0.30 +0.0 4,919,528 + Psyr_4130 0.30 +1.0 4,919,528 + Psyr_4130 0.30 -0.2 4,919,528 + Psyr_4130 0.30 +0.5 4,919,528 + Psyr_4130 0.30 +0.1 4,919,528 + Psyr_4130 0.30 +0.5 4,919,528 + Psyr_4130 0.30 +0.0 4,919,528 + Psyr_4130 0.30 +1.0 4,919,528 + Psyr_4130 0.30 +0.3 4,919,529 - Psyr_4130 0.30 +0.5 4,919,529 - Psyr_4130 0.30 +0.2 4,919,529 - Psyr_4130 0.30 -1.2 4,919,529 - Psyr_4130 0.30 -0.8 4,919,529 - Psyr_4130 0.30 -0.6 4,919,529 - Psyr_4130 0.30 +0.6 4,919,529 - Psyr_4130 0.30 -0.4 4,919,529 - Psyr_4130 0.30 -0.0 4,919,529 - Psyr_4130 0.30 +0.5 4,919,809 + Psyr_4130 0.55 +0.9 4,919,809 + Psyr_4130 0.55 +0.3 4,919,809 + Psyr_4130 0.55 +2.4 4,919,809 + Psyr_4130 0.55 +0.4 4,919,809 + Psyr_4130 0.55 +1.4 4,919,809 + Psyr_4130 0.55 -0.9 4,919,809 + Psyr_4130 0.55 -0.2 4,919,809 + Psyr_4130 0.55 +1.9 4,919,809 + Psyr_4130 0.55 +0.0 4,919,810 - Psyr_4130 0.55 +0.8 4,919,810 - Psyr_4130 0.55 -0.6 4,919,810 - Psyr_4130 0.55 -1.2 4,919,810 - Psyr_4130 0.55 -0.6 4,919,810 - Psyr_4130 0.55 +1.2 4,919,810 - Psyr_4130 0.55 -0.9 4,919,901 + Psyr_4130 0.62 -0.2 4,920,345 + -0.4 4,920,345 + +0.7 4,920,360 + -0.3 4,920,360 + +1.1 4,920,361 - -1.5 4,920,388 - -0.2 4,920,455 - +0.7 4,920,457 - -0.0 4,920,457 - -1.4 4,920,457 - +0.4 4,920,457 - +0.7 4,920,457 - +0.1 4,920,459 - -0.2 4,920,459 - -0.8 4,920,459 - -0.2 4,921,117 + -1.6 4,921,117 + +0.3 4,921,117 + +1.3 4,921,189 + -0.0 4,921,190 - +0.3 4,921,190 - +0.7 4,921,190 - +3.3 4,921,190 - +1.3 4,921,190 - +3.0 4,921,190 - +0.7
Or see this region's nucleotide sequence