Experiment: KB with Flavone 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4084 and Psyr_4085 are separated by 40 nucleotides Psyr_4085 and Psyr_4086 are separated by 174 nucleotides Psyr_4086 and Psyr_4087 are separated by 121 nucleotides Psyr_4087 and Psyr_4088 are separated by 169 nucleotides
Psyr_4084: Psyr_4084 - conserved hypothetical protein, at 4,869,754 to 4,871,292
_4084
Psyr_4085: Psyr_4085 - hypothetical protein, at 4,871,333 to 4,871,848
_4085
Psyr_4086: Psyr_4086 - MscS Mechanosensitive ion channel, at 4,872,023 to 4,872,853
_4086
Psyr_4087: Psyr_4087 - Protein of unknown function DUF520, at 4,872,975 to 4,873,454
_4087
Psyr_4088: Psyr_4088 - ketopantoate reductase, at 4,873,624 to 4,874,544
_4088
Position (kb) 4872
4873 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4871.068 kb on + strand, within Psyr_4084 at 4871.104 kb on - strand, within Psyr_4084 at 4871.204 kb on + strand at 4871.204 kb on + strand at 4871.301 kb on - strand at 4871.332 kb on + strand at 4871.332 kb on + strand at 4871.332 kb on + strand at 4871.332 kb on + strand at 4871.333 kb on - strand at 4871.333 kb on - strand at 4871.333 kb on - strand at 4871.333 kb on - strand at 4871.333 kb on - strand at 4871.333 kb on - strand at 4871.336 kb on + strand at 4871.336 kb on + strand at 4871.336 kb on + strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.337 kb on - strand at 4871.350 kb on + strand at 4871.361 kb on + strand at 4871.405 kb on - strand, within Psyr_4085 at 4871.405 kb on - strand, within Psyr_4085 at 4871.518 kb on + strand, within Psyr_4085 at 4871.574 kb on + strand, within Psyr_4085 at 4871.598 kb on + strand, within Psyr_4085 at 4871.598 kb on + strand, within Psyr_4085 at 4871.599 kb on - strand, within Psyr_4085 at 4871.632 kb on + strand, within Psyr_4085 at 4871.640 kb on + strand, within Psyr_4085 at 4871.641 kb on - strand, within Psyr_4085 at 4871.641 kb on - strand, within Psyr_4085 at 4871.736 kb on + strand, within Psyr_4085 at 4871.831 kb on + strand at 4871.831 kb on + strand at 4871.831 kb on + strand at 4871.838 kb on - strand at 4871.838 kb on - strand at 4871.842 kb on + strand at 4871.842 kb on + strand at 4871.843 kb on - strand at 4871.846 kb on + strand at 4871.846 kb on + strand at 4871.847 kb on - strand at 4871.847 kb on - strand at 4871.847 kb on - strand at 4871.847 kb on - strand at 4871.851 kb on + strand at 4871.851 kb on + strand at 4871.886 kb on - strand at 4871.898 kb on + strand at 4871.946 kb on + strand at 4871.947 kb on - strand at 4871.966 kb on - strand at 4871.966 kb on - strand at 4871.966 kb on - strand at 4871.966 kb on - strand at 4871.969 kb on + strand at 4871.969 kb on + strand at 4871.969 kb on + strand at 4872.009 kb on + strand at 4872.010 kb on - strand at 4872.024 kb on + strand at 4872.025 kb on - strand at 4872.166 kb on + strand, within Psyr_4086 at 4872.166 kb on + strand, within Psyr_4086 at 4872.166 kb on + strand, within Psyr_4086 at 4872.166 kb on + strand, within Psyr_4086 at 4872.166 kb on + strand, within Psyr_4086 at 4872.166 kb on + strand, within Psyr_4086 at 4872.167 kb on - strand, within Psyr_4086 at 4872.167 kb on - strand, within Psyr_4086 at 4872.167 kb on - strand, within Psyr_4086 at 4872.167 kb on - strand, within Psyr_4086 at 4872.167 kb on - strand, within Psyr_4086 at 4872.167 kb on - strand, within Psyr_4086 at 4872.743 kb on + strand, within Psyr_4086 at 4872.784 kb on - strand at 4872.858 kb on - strand at 4872.865 kb on + strand at 4872.865 kb on + strand at 4873.366 kb on + strand, within Psyr_4087 at 4873.389 kb on - strand, within Psyr_4087 at 4873.437 kb on + strand at 4873.437 kb on + strand at 4873.437 kb on + strand at 4873.437 kb on + strand at 4873.437 kb on + strand at 4873.437 kb on + strand at 4873.438 kb on - strand at 4873.438 kb on - strand at 4873.438 kb on - strand at 4873.438 kb on - strand at 4873.438 kb on - strand at 4873.438 kb on - strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.456 kb on + strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.457 kb on - strand at 4873.469 kb on + strand at 4873.527 kb on + strand at 4873.527 kb on + strand at 4873.530 kb on - strand at 4873.530 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Flavone 0.25 mg/ml remove 4,871,068 + Psyr_4084 0.85 -1.1 4,871,104 - Psyr_4084 0.88 +0.6 4,871,204 + -0.6 4,871,204 + -0.5 4,871,301 - +0.9 4,871,332 + -0.1 4,871,332 + +0.0 4,871,332 + +0.3 4,871,332 + +0.7 4,871,333 - +0.4 4,871,333 - -1.2 4,871,333 - -0.9 4,871,333 - -0.8 4,871,333 - +0.8 4,871,333 - -1.4 4,871,336 + +0.8 4,871,336 + +0.8 4,871,336 + +0.2 4,871,337 - +0.6 4,871,337 - +1.4 4,871,337 - +0.6 4,871,337 - +0.8 4,871,337 - +0.2 4,871,337 - +0.5 4,871,337 - +0.2 4,871,337 - -0.3 4,871,337 - +1.0 4,871,337 - -1.6 4,871,337 - -3.0 4,871,337 - -1.4 4,871,337 - -0.3 4,871,337 - +1.9 4,871,337 - +0.1 4,871,337 - +0.8 4,871,337 - +0.7 4,871,337 - +0.8 4,871,337 - +0.8 4,871,337 - -1.1 4,871,350 + -0.5 4,871,361 + +0.4 4,871,405 - Psyr_4085 0.14 -0.3 4,871,405 - Psyr_4085 0.14 +0.7 4,871,518 + Psyr_4085 0.36 +0.7 4,871,574 + Psyr_4085 0.47 +0.5 4,871,598 + Psyr_4085 0.51 +0.8 4,871,598 + Psyr_4085 0.51 -1.5 4,871,599 - Psyr_4085 0.52 +0.8 4,871,632 + Psyr_4085 0.58 -0.3 4,871,640 + Psyr_4085 0.59 +0.9 4,871,641 - Psyr_4085 0.60 +0.3 4,871,641 - Psyr_4085 0.60 +0.8 4,871,736 + Psyr_4085 0.78 +0.4 4,871,831 + -0.7 4,871,831 + -2.1 4,871,831 + -0.4 4,871,838 - -0.1 4,871,838 - -0.6 4,871,842 + +2.8 4,871,842 + +0.1 4,871,843 - +0.9 4,871,846 + +0.0 4,871,846 + +2.5 4,871,847 - +1.4 4,871,847 - +1.9 4,871,847 - +0.4 4,871,847 - -0.5 4,871,851 + -0.5 4,871,851 + -0.6 4,871,886 - +0.7 4,871,898 + -0.8 4,871,946 + -2.6 4,871,947 - +0.1 4,871,966 - -0.1 4,871,966 - +2.1 4,871,966 - -0.6 4,871,966 - -0.7 4,871,969 + -0.4 4,871,969 + +1.5 4,871,969 + +0.9 4,872,009 + +0.2 4,872,010 - +0.7 4,872,024 + -1.6 4,872,025 - +1.6 4,872,166 + Psyr_4086 0.17 +0.0 4,872,166 + Psyr_4086 0.17 -0.7 4,872,166 + Psyr_4086 0.17 -0.4 4,872,166 + Psyr_4086 0.17 +0.3 4,872,166 + Psyr_4086 0.17 -0.9 4,872,166 + Psyr_4086 0.17 -0.6 4,872,167 - Psyr_4086 0.17 +0.0 4,872,167 - Psyr_4086 0.17 -1.4 4,872,167 - Psyr_4086 0.17 -0.9 4,872,167 - Psyr_4086 0.17 -0.3 4,872,167 - Psyr_4086 0.17 -0.8 4,872,167 - Psyr_4086 0.17 +0.6 4,872,743 + Psyr_4086 0.87 -0.2 4,872,784 - +0.4 4,872,858 - +0.9 4,872,865 + +1.4 4,872,865 + +0.5 4,873,366 + Psyr_4087 0.81 -0.0 4,873,389 - Psyr_4087 0.86 -0.3 4,873,437 + -0.5 4,873,437 + -1.2 4,873,437 + -0.3 4,873,437 + +1.1 4,873,437 + +1.1 4,873,437 + -0.5 4,873,438 - +0.9 4,873,438 - -0.3 4,873,438 - +0.6 4,873,438 - +1.8 4,873,438 - +0.4 4,873,438 - -0.3 4,873,456 + +0.9 4,873,456 + +0.5 4,873,456 + +0.8 4,873,456 + -0.8 4,873,456 + -0.2 4,873,456 + -0.7 4,873,456 + +0.9 4,873,456 + +0.7 4,873,456 + +0.9 4,873,456 + +0.1 4,873,456 + -0.3 4,873,456 + +0.8 4,873,456 + +0.4 4,873,456 + +3.5 4,873,456 + +1.6 4,873,456 + +0.2 4,873,456 + +1.9 4,873,456 + +1.4 4,873,456 + -0.3 4,873,456 + -0.4 4,873,456 + +0.7 4,873,456 + +1.5 4,873,456 + +1.4 4,873,456 + -1.2 4,873,456 + -2.1 4,873,456 + +0.9 4,873,456 + +0.0 4,873,456 + -0.6 4,873,456 + +0.6 4,873,456 + -0.6 4,873,456 + +0.4 4,873,456 + +0.1 4,873,456 + +0.2 4,873,456 + -0.0 4,873,456 + -0.9 4,873,456 + -0.1 4,873,457 - +0.4 4,873,457 - +0.2 4,873,457 - -0.8 4,873,457 - -1.6 4,873,457 - -0.3 4,873,457 - -0.1 4,873,457 - -1.3 4,873,457 - +0.0 4,873,457 - +0.5 4,873,457 - +0.2 4,873,457 - +0.1 4,873,457 - -0.1 4,873,457 - -1.4 4,873,457 - +0.4 4,873,457 - +0.3 4,873,457 - +0.4 4,873,457 - +0.3 4,873,457 - -0.9 4,873,457 - -0.1 4,873,457 - +0.7 4,873,457 - +0.4 4,873,457 - +0.7 4,873,457 - -0.2 4,873,457 - +0.9 4,873,457 - +0.9 4,873,457 - -0.9 4,873,457 - +0.8 4,873,457 - -0.7 4,873,457 - -2.1 4,873,457 - +0.3 4,873,457 - +0.2 4,873,457 - -1.0 4,873,457 - -2.0 4,873,457 - +0.5 4,873,469 + +0.9 4,873,527 + +0.7 4,873,527 + +0.5 4,873,530 - +0.2 4,873,530 - -1.1
Or see this region's nucleotide sequence