Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3232

Experiment: KB with Flavone 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Flavone 0.25 mg/ml
3,870,600	-		Psyr_3231	0.37	-0.3
3,870,600	-		Psyr_3231	0.37	+1.4
3,870,655	-		Psyr_3231	0.41	-0.9
3,870,713	+		Psyr_3231	0.45	+0.4
3,870,713	+		Psyr_3231	0.45	+0.2
3,870,713	+		Psyr_3231	0.45	-0.8
3,870,713	+		Psyr_3231	0.45	+1.5
3,870,713	+		Psyr_3231	0.45	-0.4
3,870,713	+		Psyr_3231	0.45	-0.5
3,870,713	+		Psyr_3231	0.45	+0.2
3,870,713	+		Psyr_3231	0.45	+0.1
3,870,713	+		Psyr_3231	0.45	-0.2
3,870,713	+		Psyr_3231	0.45	+0.4
3,870,713	+		Psyr_3231	0.45	-0.2
3,870,713	+		Psyr_3231	0.45	+1.3
3,870,713	+		Psyr_3231	0.45	+1.0
3,870,713	+		Psyr_3231	0.45	-1.3
3,870,713	+		Psyr_3231	0.45	-0.5
3,870,713	+		Psyr_3231	0.45	+0.5
3,870,713	+		Psyr_3231	0.45	+0.5
3,870,713	+		Psyr_3231	0.45	-1.5
3,870,713	+		Psyr_3231	0.45	-1.1
3,870,714	-		Psyr_3231	0.45	+1.6
3,870,714	-		Psyr_3231	0.45	-0.2
3,870,714	-		Psyr_3231	0.45	-1.5
3,870,714	-		Psyr_3231	0.45	+1.0
3,870,714	-		Psyr_3231	0.45	-0.1
3,870,714	-		Psyr_3231	0.45	+1.1
3,870,714	-		Psyr_3231	0.45	+2.3
3,870,714	-		Psyr_3231	0.45	+0.2
3,870,714	-		Psyr_3231	0.45	-0.1
3,870,714	-		Psyr_3231	0.45	+0.5
3,870,714	-		Psyr_3231	0.45	-1.0
3,870,714	-		Psyr_3231	0.45	-0.1
3,870,714	-		Psyr_3231	0.45	-1.2
3,870,714	-		Psyr_3231	0.45	-0.4
3,870,714	-		Psyr_3231	0.45	+1.0
3,870,714	-		Psyr_3231	0.45	+2.1
3,870,714	-		Psyr_3231	0.45	+1.1
3,870,714	-		Psyr_3231	0.45	+1.5
3,870,714	-		Psyr_3231	0.45	-0.9
3,870,714	-		Psyr_3231	0.45	+1.8
3,870,714	-		Psyr_3231	0.45	+0.4
3,870,714	-		Psyr_3231	0.45	+2.5
3,870,714	-		Psyr_3231	0.45	+0.7
3,870,714	-		Psyr_3231	0.45	-0.4
3,870,714	-		Psyr_3231	0.45	-1.2
3,870,714	-		Psyr_3231	0.45	-0.9
3,870,715	+		Psyr_3231	0.45	-0.2
3,870,716	-		Psyr_3231	0.46	+1.4
3,871,397	+				+1.5
3,871,397	+				-1.2
3,871,398	-				+0.1
3,871,398	-				+0.9
3,871,398	-				-0.3
3,871,586	+				+0.2
3,871,638	+				+0.1
3,871,638	+				-0.7
3,871,638	+				-0.6
3,871,638	+				-0.4
3,871,639	-				+0.3
3,871,639	-				-0.7
3,871,639	-				-0.2
3,871,639	-				+1.4
3,871,639	-				-0.4
3,871,639	-				+0.7
3,871,639	-				-1.1
3,871,639	-				+0.4
3,871,639	-				-0.1
3,871,639	-				+0.5
3,871,777	+		Psyr_3232	0.20	-0.3
3,871,792	+		Psyr_3232	0.21	+4.1
3,871,813	-		Psyr_3232	0.23	+0.8
3,871,915	+		Psyr_3232	0.32	+0.9
3,871,915	+		Psyr_3232	0.32	-0.2
3,871,916	-		Psyr_3232	0.32	+1.1
3,871,916	-		Psyr_3232	0.32	+0.5
3,871,928	+		Psyr_3232	0.33	+0.3
3,871,928	+		Psyr_3232	0.33	+0.0
3,871,928	+		Psyr_3232	0.33	+0.8
3,871,928	+		Psyr_3232	0.33	+0.6
3,871,928	+		Psyr_3232	0.33	-0.9
3,871,929	-		Psyr_3232	0.34	-2.9
3,871,929	-		Psyr_3232	0.34	+1.1
3,871,929	-		Psyr_3232	0.34	-0.5
3,872,002	+		Psyr_3232	0.40	-0.3
3,872,002	+		Psyr_3232	0.40	+0.5
3,872,002	+		Psyr_3232	0.40	-0.1
3,872,003	-		Psyr_3232	0.40	+0.4
3,872,003	-		Psyr_3232	0.40	-0.2
3,872,038	+		Psyr_3232	0.44	+0.8
3,872,039	-		Psyr_3232	0.44	+1.8
3,872,273	-		Psyr_3232	0.65	+2.8
3,872,308	+		Psyr_3232	0.68	-0.8
3,872,308	+		Psyr_3232	0.68	-0.5
3,872,309	-		Psyr_3232	0.68	+0.1
3,872,309	-		Psyr_3232	0.68	+0.6
3,872,309	-		Psyr_3232	0.68	-0.2
3,872,309	-		Psyr_3232	0.68	+1.5
3,872,431	+		Psyr_3232	0.80	-0.6
3,872,432	-		Psyr_3232	0.80	+2.1
3,872,432	-		Psyr_3232	0.80	-2.3
3,872,432	-		Psyr_3232	0.80	-0.3
3,872,438	+		Psyr_3232	0.80	+0.6
3,872,438	+		Psyr_3232	0.80	+1.0
3,872,438	+		Psyr_3232	0.80	+1.4
3,872,438	+		Psyr_3232	0.80	+0.5
3,872,438	+		Psyr_3232	0.80	-0.2
3,872,438	+		Psyr_3232	0.80	-1.1
3,872,438	+		Psyr_3232	0.80	+1.0
3,872,438	+		Psyr_3232	0.80	-0.2
3,872,625	-				-0.9
3,872,860	+				+1.2
3,872,860	+				+0.5
3,872,860	+				-0.5
3,872,860	+				-0.1
3,872,860	+				+0.0
3,872,860	+				-0.1
3,872,861	-				+0.5
3,872,861	-				+1.2
3,872,861	-				+0.5
3,872,861	-				+0.1
3,872,861	-				-2.9
3,872,861	-				+2.4
3,872,878	+				-2.1
3,872,878	+				+0.3
3,872,878	+				+0.3
3,872,878	+				+0.5
3,872,879	-				+0.5
3,872,879	-				+0.2
3,872,879	-				+1.3
3,872,879	-				-0.1
3,872,879	-				-2.1
3,872,958	+				-0.5
3,872,959	-				+0.4
3,873,004	+		Psyr_3233	0.17	-0.1
3,873,131	+		Psyr_3233	0.39	-0.7
3,873,131	+		Psyr_3233	0.39	-0.8
3,873,131	+		Psyr_3233	0.39	-0.0
3,873,132	-		Psyr_3233	0.39	-0.7
3,873,132	-		Psyr_3233	0.39	+0.8
3,873,354	+		Psyr_3233	0.77	+0.8
3,873,483	-				-0.8
3,873,483	-				+1.6
3,873,570	-		Psyr_3234	0.11	+1.3
3,873,570	-		Psyr_3234	0.11	-0.8
3,873,573	+		Psyr_3234	0.11	+0.5