Experiment: KB with Flavone 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1296 and Psyr_1297 are separated by 142 nucleotides Psyr_1297 and Psyr_1298 are separated by 61 nucleotides Psyr_1298 and Psyr_1299 are separated by 112 nucleotides
Psyr_1296: Psyr_1296 - conserved hypothetical protein, at 1,464,224 to 1,465,102
_1296
Psyr_1297: Psyr_1297 - YaeQ, at 1,465,245 to 1,465,931
_1297
Psyr_1298: Psyr_1298 - exonuclease RecJ, at 1,465,993 to 1,467,708
_1298
Psyr_1299: Psyr_1299 - NADH:flavin oxidoreductase/NADH oxidase, at 1,467,821 to 1,468,927
_1299
Position (kb) 1465
1466
1467
1468 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1465.235 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.244 kb on + strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.245 kb on - strand at 1465.248 kb on + strand at 1465.248 kb on + strand at 1465.248 kb on + strand at 1465.248 kb on + strand at 1465.249 kb on - strand at 1465.249 kb on - strand at 1465.376 kb on + strand, within Psyr_1297 at 1465.376 kb on + strand, within Psyr_1297 at 1465.376 kb on + strand, within Psyr_1297 at 1465.377 kb on - strand, within Psyr_1297 at 1465.377 kb on - strand, within Psyr_1297 at 1465.411 kb on - strand, within Psyr_1297 at 1465.411 kb on - strand, within Psyr_1297 at 1465.527 kb on + strand, within Psyr_1297 at 1465.527 kb on + strand, within Psyr_1297 at 1465.528 kb on - strand, within Psyr_1297 at 1465.528 kb on - strand, within Psyr_1297 at 1465.539 kb on + strand, within Psyr_1297 at 1465.539 kb on + strand, within Psyr_1297 at 1465.539 kb on + strand, within Psyr_1297 at 1465.540 kb on - strand, within Psyr_1297 at 1465.540 kb on - strand, within Psyr_1297 at 1465.540 kb on - strand, within Psyr_1297 at 1465.540 kb on - strand, within Psyr_1297 at 1466.069 kb on - strand at 1466.162 kb on + strand at 1466.293 kb on + strand, within Psyr_1298 at 1466.293 kb on + strand, within Psyr_1298 at 1466.294 kb on - strand, within Psyr_1298 at 1466.332 kb on - strand, within Psyr_1298 at 1466.417 kb on + strand, within Psyr_1298 at 1466.527 kb on - strand, within Psyr_1298 at 1466.527 kb on - strand, within Psyr_1298 at 1466.569 kb on + strand, within Psyr_1298 at 1466.569 kb on + strand, within Psyr_1298 at 1466.570 kb on - strand, within Psyr_1298 at 1466.573 kb on + strand, within Psyr_1298 at 1466.573 kb on + strand, within Psyr_1298 at 1466.573 kb on + strand, within Psyr_1298 at 1466.574 kb on - strand, within Psyr_1298 at 1466.574 kb on - strand, within Psyr_1298 at 1467.635 kb on - strand at 1467.748 kb on + strand at 1467.749 kb on - strand at 1467.842 kb on + strand at 1467.842 kb on + strand at 1467.842 kb on + strand at 1467.842 kb on + strand at 1467.842 kb on + strand at 1467.842 kb on + strand at 1467.843 kb on - strand at 1467.843 kb on - strand at 1467.843 kb on - strand at 1467.900 kb on - strand at 1468.072 kb on + strand, within Psyr_1299 at 1468.073 kb on - strand, within Psyr_1299 at 1468.073 kb on - strand, within Psyr_1299 at 1468.177 kb on + strand, within Psyr_1299 at 1468.178 kb on - strand, within Psyr_1299 at 1468.364 kb on + strand, within Psyr_1299 at 1468.364 kb on + strand, within Psyr_1299 at 1468.364 kb on + strand, within Psyr_1299 at 1468.415 kb on + strand, within Psyr_1299 at 1468.416 kb on - strand, within Psyr_1299 at 1468.416 kb on - strand, within Psyr_1299 at 1468.447 kb on + strand, within Psyr_1299 at 1468.608 kb on + strand, within Psyr_1299 at 1468.608 kb on + strand, within Psyr_1299 at 1468.609 kb on - strand, within Psyr_1299 at 1468.609 kb on - strand, within Psyr_1299 at 1468.609 kb on - strand, within Psyr_1299 at 1468.609 kb on - strand, within Psyr_1299 at 1468.609 kb on - strand, within Psyr_1299 at 1468.609 kb on - strand, within Psyr_1299 at 1468.609 kb on - strand, within Psyr_1299 at 1468.609 kb on - strand, within Psyr_1299 at 1468.621 kb on + strand, within Psyr_1299
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Flavone 0.25 mg/ml remove 1,465,235 + +1.3 1,465,244 + +0.0 1,465,244 + +1.3 1,465,244 + +1.5 1,465,244 + +0.3 1,465,244 + +0.9 1,465,244 + +0.9 1,465,244 + -0.5 1,465,244 + +0.2 1,465,244 + -0.4 1,465,244 + +1.5 1,465,244 + +1.5 1,465,244 + -0.6 1,465,244 + -3.1 1,465,244 + +0.1 1,465,244 + -0.1 1,465,244 + +0.6 1,465,244 + +0.9 1,465,244 + +1.6 1,465,244 + -1.0 1,465,244 + +0.9 1,465,244 + -0.1 1,465,244 + -1.9 1,465,244 + -1.5 1,465,245 - +1.9 1,465,245 - -1.5 1,465,245 - +0.0 1,465,245 - +0.2 1,465,245 - +0.2 1,465,245 - +0.4 1,465,245 - +0.7 1,465,245 - -0.0 1,465,245 - -0.4 1,465,245 - +0.6 1,465,245 - +1.4 1,465,245 - +0.2 1,465,245 - +0.5 1,465,245 - -0.3 1,465,245 - +0.9 1,465,245 - +0.3 1,465,245 - +0.5 1,465,248 + +1.9 1,465,248 + +0.1 1,465,248 + +1.1 1,465,248 + +1.3 1,465,249 - -1.3 1,465,249 - -0.6 1,465,376 + Psyr_1297 0.19 -0.0 1,465,376 + Psyr_1297 0.19 -1.5 1,465,376 + Psyr_1297 0.19 -0.4 1,465,377 - Psyr_1297 0.19 -0.5 1,465,377 - Psyr_1297 0.19 -0.6 1,465,411 - Psyr_1297 0.24 +0.7 1,465,411 - Psyr_1297 0.24 -0.3 1,465,527 + Psyr_1297 0.41 -1.1 1,465,527 + Psyr_1297 0.41 -0.5 1,465,528 - Psyr_1297 0.41 -0.6 1,465,528 - Psyr_1297 0.41 +3.2 1,465,539 + Psyr_1297 0.43 +1.5 1,465,539 + Psyr_1297 0.43 -1.9 1,465,539 + Psyr_1297 0.43 -0.3 1,465,540 - Psyr_1297 0.43 +0.1 1,465,540 - Psyr_1297 0.43 +0.7 1,465,540 - Psyr_1297 0.43 -0.3 1,465,540 - Psyr_1297 0.43 +0.2 1,466,069 - -0.9 1,466,162 + +0.1 1,466,293 + Psyr_1298 0.17 +0.3 1,466,293 + Psyr_1298 0.17 +0.5 1,466,294 - Psyr_1298 0.18 -0.3 1,466,332 - Psyr_1298 0.20 -0.5 1,466,417 + Psyr_1298 0.25 -0.7 1,466,527 - Psyr_1298 0.31 +0.4 1,466,527 - Psyr_1298 0.31 +0.2 1,466,569 + Psyr_1298 0.34 +1.0 1,466,569 + Psyr_1298 0.34 +0.9 1,466,570 - Psyr_1298 0.34 +0.0 1,466,573 + Psyr_1298 0.34 -0.5 1,466,573 + Psyr_1298 0.34 -1.9 1,466,573 + Psyr_1298 0.34 +1.9 1,466,574 - Psyr_1298 0.34 -0.5 1,466,574 - Psyr_1298 0.34 -1.5 1,467,635 - -2.7 1,467,748 + -0.0 1,467,749 - +0.2 1,467,842 + +1.3 1,467,842 + -0.1 1,467,842 + +0.7 1,467,842 + +0.8 1,467,842 + -0.8 1,467,842 + +0.9 1,467,843 - +1.7 1,467,843 - -0.7 1,467,843 - -0.4 1,467,900 - -0.3 1,468,072 + Psyr_1299 0.23 -0.9 1,468,073 - Psyr_1299 0.23 +0.4 1,468,073 - Psyr_1299 0.23 +0.9 1,468,177 + Psyr_1299 0.32 +0.5 1,468,178 - Psyr_1299 0.32 +0.4 1,468,364 + Psyr_1299 0.49 +0.8 1,468,364 + Psyr_1299 0.49 -0.1 1,468,364 + Psyr_1299 0.49 -0.1 1,468,415 + Psyr_1299 0.54 +0.1 1,468,416 - Psyr_1299 0.54 +0.2 1,468,416 - Psyr_1299 0.54 +1.1 1,468,447 + Psyr_1299 0.57 +0.1 1,468,608 + Psyr_1299 0.71 -0.4 1,468,608 + Psyr_1299 0.71 -0.1 1,468,609 - Psyr_1299 0.71 +0.9 1,468,609 - Psyr_1299 0.71 -0.6 1,468,609 - Psyr_1299 0.71 +0.7 1,468,609 - Psyr_1299 0.71 +0.0 1,468,609 - Psyr_1299 0.71 -0.9 1,468,609 - Psyr_1299 0.71 +0.3 1,468,609 - Psyr_1299 0.71 +1.2 1,468,609 - Psyr_1299 0.71 -0.2 1,468,621 + Psyr_1299 0.72 -0.5
Or see this region's nucleotide sequence