Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3411

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
3,541,243	+		Ga0059261_3410	0.22	-1.0
3,541,280	+		Ga0059261_3410	0.25	+0.2
3,541,280	+		Ga0059261_3410	0.25	-0.7
3,541,281	-		Ga0059261_3410	0.25	+0.3
3,541,396	-		Ga0059261_3410	0.35	-0.1
3,541,396	-		Ga0059261_3410	0.35	-0.3
3,541,396	-		Ga0059261_3410	0.35	+0.0
3,541,411	+		Ga0059261_3410	0.36	+0.3
3,541,411	+		Ga0059261_3410	0.36	+0.3
3,541,412	-		Ga0059261_3410	0.36	+0.3
3,541,412	-		Ga0059261_3410	0.36	+0.6
3,541,412	-		Ga0059261_3410	0.36	-1.4
3,541,412	-		Ga0059261_3410	0.36	-0.5
3,541,420	+				+0.4
3,541,421	-		Ga0059261_3410	0.37	+1.0
3,541,421	-		Ga0059261_3410	0.37	-1.2
3,541,421	-		Ga0059261_3410	0.37	-0.2
3,541,421	-		Ga0059261_3410	0.37	+1.0
3,541,423	+		Ga0059261_3410	0.37	-0.1
3,541,424	-		Ga0059261_3410	0.37	-0.7
3,541,424	-		Ga0059261_3410	0.37	-1.4
3,541,459	+		Ga0059261_3410	0.40	-0.7
3,541,459	+		Ga0059261_3410	0.40	-1.3
3,541,459	+		Ga0059261_3410	0.40	+0.6
3,541,460	-		Ga0059261_3410	0.40	+0.1
3,541,460	-		Ga0059261_3410	0.40	+0.1
3,541,474	+		Ga0059261_3410	0.41	+0.3
3,541,474	+		Ga0059261_3410	0.41	+0.2
3,541,475	-		Ga0059261_3410	0.41	+0.1
3,541,475	-		Ga0059261_3410	0.41	+0.0
3,541,475	-		Ga0059261_3410	0.41	-0.0
3,541,633	+		Ga0059261_3410	0.53	-1.0
3,541,648	-		Ga0059261_3410	0.55	-1.1
3,541,708	-		Ga0059261_3410	0.59	-0.0
3,542,023	+		Ga0059261_3410	0.84	+0.5
3,542,023	+		Ga0059261_3410	0.84	-0.2
3,542,024	-		Ga0059261_3410	0.84	+0.3
3,542,477	+		Ga0059261_3411	0.51	+0.2
3,542,477	+		Ga0059261_3411	0.51	+0.1
3,542,477	+		Ga0059261_3411	0.51	+0.3
3,542,477	+		Ga0059261_3411	0.51	-0.1
3,542,477	+		Ga0059261_3411	0.51	+0.4
3,542,478	-		Ga0059261_3411	0.51	-1.5
3,542,478	-		Ga0059261_3411	0.51	-0.0
3,542,532	+		Ga0059261_3411	0.61	+0.4
3,542,532	+		Ga0059261_3411	0.61	-0.6
3,542,532	+		Ga0059261_3411	0.61	-0.4
3,542,533	-		Ga0059261_3411	0.62	+0.3
3,542,533	-		Ga0059261_3411	0.62	+0.4
3,542,533	-		Ga0059261_3411	0.62	+0.4
3,542,533	-		Ga0059261_3411	0.62	+0.3
3,542,595	+		Ga0059261_3411	0.74	+1.0
3,542,595	+		Ga0059261_3411	0.74	+2.3
3,542,595	+		Ga0059261_3411	0.74	-0.1
3,542,595	+		Ga0059261_3411	0.74	+0.8
3,542,605	+		Ga0059261_3411	0.76	+1.7
3,542,605	+		Ga0059261_3411	0.76	-0.2
3,542,605	+		Ga0059261_3411	0.76	+1.5
3,542,606	-		Ga0059261_3411	0.76	+0.3
3,542,758	+				+0.7
3,542,758	+				+0.5
3,542,758	+				+0.8
3,542,758	+				+0.4
3,542,758	+				+0.8
3,542,758	+				-0.4
3,542,758	+				+1.0
3,542,758	+				-0.2
3,542,758	+				-0.2
3,542,758	+				-0.1
3,542,758	+				-0.5
3,542,759	-				-2.4
3,542,759	-				+2.4
3,542,759	-				-0.2
3,542,759	-				-0.2
3,542,759	-				+0.4
3,542,759	-				+0.5
3,542,759	-				+0.5
3,542,759	-				+0.1
3,542,759	-				-0.1
3,542,759	-				+0.5
3,542,759	-				+0.3
3,542,759	-				-1.0
3,542,759	-				+0.1
3,542,759	-				-1.3
3,542,759	-				-0.2
3,542,759	-				+1.1
3,542,759	-				+0.1
3,542,862	+		Ga0059261_3412	0.19	-0.0
3,542,863	-		Ga0059261_3412	0.20	+0.2
3,542,863	-		Ga0059261_3412	0.20	+0.5
3,543,014	+		Ga0059261_3412	0.40	-0.5
3,543,014	+		Ga0059261_3412	0.40	+0.2
3,543,015	-		Ga0059261_3412	0.41	+0.1
3,543,043	+		Ga0059261_3412	0.44	+0.2
3,543,043	+		Ga0059261_3412	0.44	-0.0
3,543,043	+		Ga0059261_3412	0.44	-0.5
3,543,043	+		Ga0059261_3412	0.44	+0.5
3,543,044	-		Ga0059261_3412	0.45	+0.7
3,543,052	+		Ga0059261_3412	0.46	+0.4
3,543,052	+		Ga0059261_3412	0.46	-0.2
3,543,053	-		Ga0059261_3412	0.46	+0.6
3,543,053	-		Ga0059261_3412	0.46	-0.3
3,543,053	-		Ga0059261_3412	0.46	-1.3
3,543,346	+		Ga0059261_3412	0.86	+0.9
3,543,347	-		Ga0059261_3412	0.86	-0.1
3,543,347	-		Ga0059261_3412	0.86	+0.3
3,543,347	-		Ga0059261_3412	0.86	+0.6
3,543,370	+		Ga0059261_3412	0.90	+0.3
3,543,370	+		Ga0059261_3412	0.90	-0.6
3,543,370	+		Ga0059261_3412	0.90	-0.0
3,543,370	+		Ga0059261_3412	0.90	+0.0
3,543,371	-		Ga0059261_3412	0.90	+0.6
3,543,371	-		Ga0059261_3412	0.90	-1.2
3,543,371	-		Ga0059261_3412	0.90	-0.7
3,543,371	-		Ga0059261_3412	0.90	-0.8
3,543,691	+		Ga0059261_3413	0.23	+1.0
3,543,691	+		Ga0059261_3413	0.23	+0.1
3,543,692	-		Ga0059261_3413	0.23	-0.5
3,543,692	-		Ga0059261_3413	0.23	+1.0
3,543,710	+		Ga0059261_3413	0.25	+0.2