Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3209

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
3,343,255	+		Ga0059261_3207	0.86	-0.4
3,343,255	+		Ga0059261_3207	0.86	-0.6
3,343,255	+		Ga0059261_3207	0.86	-0.2
3,343,256	-		Ga0059261_3207	0.86	+0.7
3,343,256	-		Ga0059261_3207	0.86	+3.0
3,343,256	-		Ga0059261_3207	0.86	+0.2
3,343,257	+		Ga0059261_3207	0.86	+1.7
3,343,257	+		Ga0059261_3207	0.86	+0.3
3,343,390	+				+0.1
3,343,390	+				-0.3
3,343,391	-				+0.3
3,343,402	+				-0.0
3,343,402	+				+0.0
3,343,402	+				-0.0
3,343,403	-				-0.9
3,343,403	-				-0.6
3,343,434	+				-0.6
3,343,434	+				-0.6
3,343,434	+				-0.2
3,343,435	-				-1.0
3,343,435	-				-0.4
3,343,472	+				-1.7
3,343,507	-		Ga0059261_3208	0.15	-0.6
3,343,622	-		Ga0059261_3208	0.44	-0.8
3,343,809	+				-0.8
3,343,809	+				-1.0
3,343,809	+				-2.2
3,343,809	+				-2.4
3,343,810	-				-0.5
3,343,810	-				-0.5
3,344,008	+		Ga0059261_3209	0.16	-0.7
3,344,008	+		Ga0059261_3209	0.16	-0.3
3,344,009	-				+0.4
3,344,009	-		Ga0059261_3209	0.16	-1.5
3,344,011	-		Ga0059261_3209	0.17	-1.0
3,344,011	-		Ga0059261_3209	0.17	-0.7
3,344,011	-		Ga0059261_3209	0.17	-0.2
3,344,011	-		Ga0059261_3209	0.17	-0.5
3,344,027	+		Ga0059261_3209	0.19	-0.1
3,344,027	+		Ga0059261_3209	0.19	-0.6
3,344,027	+		Ga0059261_3209	0.19	-0.3
3,344,027	+		Ga0059261_3209	0.19	-0.0
3,344,027	+				+0.4
3,344,028	-		Ga0059261_3209	0.19	-0.0
3,344,028	-		Ga0059261_3209	0.19	-0.2
3,344,028	-		Ga0059261_3209	0.19	-0.7
3,344,028	-		Ga0059261_3209	0.19	+0.7
3,344,028	-		Ga0059261_3209	0.19	-0.5
3,344,081	+		Ga0059261_3209	0.27	-0.6
3,344,081	+		Ga0059261_3209	0.27	-0.6
3,344,081	+		Ga0059261_3209	0.27	-1.1
3,344,082	-		Ga0059261_3209	0.27	-0.6
3,344,082	-		Ga0059261_3209	0.27	-1.7
3,344,082	-		Ga0059261_3209	0.27	-0.3
3,344,082	-		Ga0059261_3209	0.27	-1.3
3,344,082	-		Ga0059261_3209	0.27	-1.0
3,344,082	-		Ga0059261_3209	0.27	+0.1
3,344,166	+		Ga0059261_3209	0.39	-0.1
3,344,167	-		Ga0059261_3209	0.39	-0.8
3,344,179	+		Ga0059261_3209	0.41	-1.1
3,344,179	+		Ga0059261_3209	0.41	-1.3
3,344,179	+		Ga0059261_3209	0.41	-0.0
3,344,179	+		Ga0059261_3209	0.41	-0.7
3,344,179	+		Ga0059261_3209	0.41	+2.0
3,344,179	+		Ga0059261_3209	0.41	-0.3
3,344,179	+		Ga0059261_3209	0.41	-1.6
3,344,179	+		Ga0059261_3209	0.41	-1.3
3,344,179	+		Ga0059261_3209	0.41	-0.0
3,344,179	+		Ga0059261_3209	0.41	-0.4
3,344,179	+		Ga0059261_3209	0.41	-0.7
3,344,179	+		Ga0059261_3209	0.41	-0.7
3,344,180	-		Ga0059261_3209	0.41	-1.7
3,344,180	-		Ga0059261_3209	0.41	-0.0
3,344,180	-		Ga0059261_3209	0.41	-0.0
3,344,180	-		Ga0059261_3209	0.41	+1.0
3,344,180	-		Ga0059261_3209	0.41	-0.7
3,344,180	-		Ga0059261_3209	0.41	-0.5
3,344,180	-		Ga0059261_3209	0.41	-2.8
3,344,180	-		Ga0059261_3209	0.41	-1.8
3,344,180	-		Ga0059261_3209	0.41	-0.7
3,344,254	+		Ga0059261_3209	0.52	+0.1
3,344,254	+		Ga0059261_3209	0.52	-0.8
3,344,254	+		Ga0059261_3209	0.52	-1.1
3,344,254	+		Ga0059261_3209	0.52	+1.4
3,344,254	+		Ga0059261_3209	0.52	-0.1
3,344,254	+		Ga0059261_3209	0.52	-1.3
3,344,255	-		Ga0059261_3209	0.52	-0.3
3,344,255	-		Ga0059261_3209	0.52	-0.9
3,344,255	-		Ga0059261_3209	0.52	-1.2
3,344,255	-		Ga0059261_3209	0.52	-0.5
3,344,255	-		Ga0059261_3209	0.52	-0.4
3,344,256	+		Ga0059261_3209	0.52	-0.6
3,344,256	+		Ga0059261_3209	0.52	-2.2
3,344,279	-		Ga0059261_3209	0.55	-2.5
3,344,279	-		Ga0059261_3209	0.55	+1.0
3,344,358	-		Ga0059261_3209	0.67	+0.1
3,344,467	+		Ga0059261_3209	0.83	-0.0
3,344,468	-		Ga0059261_3209	0.83	-0.6
3,344,468	-		Ga0059261_3209	0.83	-1.6
3,344,567	-				-0.6
3,344,567	-				-1.3
3,344,600	+				-1.1
3,344,600	+				-0.3
3,344,600	+				-0.9
3,344,601	-				-0.6
3,344,601	-				-0.8
3,344,643	+				-2.5
3,344,643	+				-0.0
3,344,644	-				-0.6
3,345,045	+		Ga0059261_3210	0.71	+0.9
3,345,045	+		Ga0059261_3210	0.71	-1.3
3,345,046	-		Ga0059261_3210	0.71	-0.9
3,345,262	+				-2.5
3,345,262	+				-1.3
3,345,263	-				-1.3
3,345,263	-				-1.2
3,345,263	-				+1.4
3,345,263	-				-1.4
3,345,263	-				-2.7
3,345,263	-				+2.0
3,345,331	+		Ga0059261_3211	0.15	-1.2
3,345,332	-		Ga0059261_3211	0.15	-2.7
3,345,332	-		Ga0059261_3211	0.15	-2.8
3,345,334	+		Ga0059261_3211	0.15	-2.0
3,345,335	-		Ga0059261_3211	0.15	-0.7
3,345,335	-		Ga0059261_3211	0.15	-2.2
3,345,335	-		Ga0059261_3211	0.15	-1.6
3,345,335	-		Ga0059261_3211	0.15	-2.0
3,345,335	-		Ga0059261_3211	0.15	-1.5
3,345,508	+		Ga0059261_3211	0.41	-1.8
3,345,508	+		Ga0059261_3211	0.41	-1.3
3,345,508	+		Ga0059261_3211	0.41	-1.7
3,345,509	-		Ga0059261_3211	0.41	-2.2
3,345,509	-		Ga0059261_3211	0.41	-3.2
3,345,523	+		Ga0059261_3211	0.43	-1.2
3,345,524	-		Ga0059261_3211	0.43	-1.1
3,345,577	+		Ga0059261_3211	0.51	-0.6
3,345,578	-		Ga0059261_3211	0.51	-1.6
3,345,578	-		Ga0059261_3211	0.51	-1.0
3,345,578	-		Ga0059261_3211	0.51	-1.0