Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3095

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
3,231,815	+		Ga0059261_3093	0.85	+0.7
3,231,931	+				+0.6
3,231,932	-				-0.1
3,231,932	-				-0.2
3,231,986	+				-1.0
3,231,986	+				-0.3
3,231,986	+				-0.2
3,231,986	+				+0.2
3,231,986	+				-1.2
3,231,986	+				+0.4
3,231,987	-				-0.6
3,231,987	-				-2.4
3,231,987	-				+0.7
3,231,987	-				+0.2
3,232,080	-		Ga0059261_3094	0.22	-0.7
3,232,151	+		Ga0059261_3094	0.34	-0.6
3,232,151	+		Ga0059261_3094	0.34	+0.7
3,232,151	+		Ga0059261_3094	0.34	-0.6
3,232,151	+		Ga0059261_3094	0.34	-0.6
3,232,151	+		Ga0059261_3094	0.34	-1.0
3,232,151	+		Ga0059261_3094	0.34	+0.4
3,232,151	+		Ga0059261_3094	0.34	-0.7
3,232,151	+		Ga0059261_3094	0.34	+0.0
3,232,151	+		Ga0059261_3094	0.34	-0.3
3,232,151	+				+0.7
3,232,151	+		Ga0059261_3094	0.34	-1.6
3,232,151	+				-0.6
3,232,151	+		Ga0059261_3094	0.34	+0.0
3,232,152	-		Ga0059261_3094	0.34	-0.9
3,232,152	-		Ga0059261_3094	0.34	-0.7
3,232,152	-		Ga0059261_3094	0.34	-0.6
3,232,152	-		Ga0059261_3094	0.34	+0.4
3,232,152	-		Ga0059261_3094	0.34	+0.2
3,232,152	-		Ga0059261_3094	0.34	+0.3
3,232,152	-		Ga0059261_3094	0.34	+0.8
3,232,152	-		Ga0059261_3094	0.34	-1.4
3,232,370	+		Ga0059261_3094	0.69	+0.0
3,232,371	-		Ga0059261_3094	0.69	-0.2
3,232,371	-		Ga0059261_3094	0.69	-0.4
3,232,397	+		Ga0059261_3094	0.73	-0.2
3,232,580	-				-1.7
3,232,580	-				-0.1
3,232,580	-				-0.5
3,232,648	+				+0.7
3,232,649	-				+0.2
3,232,670	+				-0.7
3,232,670	+				+1.0
3,232,670	+				-0.1
3,232,670	+				-0.2
3,232,682	+				-1.0
3,232,682	+				-0.4
3,232,682	+				-0.0
3,232,682	+				-0.1
3,232,683	-				-0.7
3,232,683	-				-0.4
3,232,683	-				+0.2
3,232,683	-				+0.5
3,232,683	-				-1.0
3,232,711	+				-0.1
3,232,712	-				+2.0
3,232,712	-				+0.0
3,232,712	-				+0.5
3,232,725	-		Ga0059261_3095	0.14	-0.2
3,232,777	+		Ga0059261_3095	0.45	+0.5
3,232,777	+		Ga0059261_3095	0.45	-0.1
3,232,777	+		Ga0059261_3095	0.45	-0.7
3,232,777	+		Ga0059261_3095	0.45	-0.5
3,232,777	+		Ga0059261_3095	0.45	+0.3
3,232,778	-		Ga0059261_3095	0.46	-0.4
3,232,778	-		Ga0059261_3095	0.46	-0.1
3,232,778	-		Ga0059261_3095	0.46	+0.7
3,232,809	+		Ga0059261_3095	0.65	+0.1
3,232,838	+		Ga0059261_3095	0.82	+0.0
3,232,838	+		Ga0059261_3095	0.82	-0.6
3,232,838	+		Ga0059261_3095	0.82	-1.0
3,232,839	-				+1.0
3,232,839	-		Ga0059261_3095	0.83	-0.8
3,232,839	-		Ga0059261_3095	0.83	-0.4
3,232,839	-		Ga0059261_3095	0.83	-0.6
3,232,839	-		Ga0059261_3095	0.83	-0.9
3,232,989	+				-1.1
3,232,989	+				-1.0
3,232,990	-				-1.3
3,232,990	-				-2.0
3,233,148	+		Ga0059261_3096	0.22	-0.9
3,233,290	+		Ga0059261_3096	0.35	-0.8
3,233,290	+		Ga0059261_3096	0.35	-1.9
3,233,290	+		Ga0059261_3096	0.35	-0.7
3,233,290	+		Ga0059261_3096	0.35	+1.0
3,233,290	+		Ga0059261_3096	0.35	-0.9
3,233,291	-		Ga0059261_3096	0.35	-1.2
3,233,291	-		Ga0059261_3096	0.35	-1.0
3,233,291	-				-1.3
3,233,291	-		Ga0059261_3096	0.35	+0.0
3,233,291	-		Ga0059261_3096	0.35	-1.6
3,233,350	+		Ga0059261_3096	0.41	-1.8
3,233,350	+		Ga0059261_3096	0.41	-1.7
3,233,350	+		Ga0059261_3096	0.41	-0.3
3,233,351	-		Ga0059261_3096	0.41	-2.0
3,233,351	-		Ga0059261_3096	0.41	-0.9
3,233,352	+		Ga0059261_3096	0.41	-1.8
3,233,352	+		Ga0059261_3096	0.41	-1.6
3,233,352	+		Ga0059261_3096	0.41	-1.8
3,233,352	+		Ga0059261_3096	0.41	-1.5
3,233,352	+		Ga0059261_3096	0.41	-1.2
3,233,352	+		Ga0059261_3096	0.41	+0.0
3,233,352	+		Ga0059261_3096	0.41	-0.4
3,233,353	-		Ga0059261_3096	0.41	-2.1
3,233,353	-		Ga0059261_3096	0.41	-1.1
3,233,353	-		Ga0059261_3096	0.41	-0.5
3,233,353	-		Ga0059261_3096	0.41	-1.3
3,233,353	-		Ga0059261_3096	0.41	-1.3
3,233,353	-		Ga0059261_3096	0.41	-1.4
3,233,419	-		Ga0059261_3096	0.48	-0.9
3,233,533	-		Ga0059261_3096	0.59	-2.0
3,233,576	-		Ga0059261_3096	0.63	+0.0
3,233,727	+		Ga0059261_3096	0.77	-1.4
3,233,727	+		Ga0059261_3096	0.77	-1.0
3,233,727	+		Ga0059261_3096	0.77	-0.7
3,233,727	+		Ga0059261_3096	0.77	-1.1
3,233,727	+		Ga0059261_3096	0.77	-0.6
3,233,728	-		Ga0059261_3096	0.78	-0.6