Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2829

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,938,519	+		Ga0059261_2828	0.25	+0.3
2,938,520	-		Ga0059261_2828	0.25	+0.2
2,938,520	-		Ga0059261_2828	0.25	+0.2
2,938,700	+		Ga0059261_2828	0.40	+0.4
2,938,700	+		Ga0059261_2828	0.40	+0.0
2,938,700	+		Ga0059261_2828	0.40	+0.2
2,938,700	+		Ga0059261_2828	0.40	-0.3
2,938,701	-		Ga0059261_2828	0.40	+0.2
2,938,719	+		Ga0059261_2828	0.41	-0.0
2,938,719	+		Ga0059261_2828	0.41	+0.2
2,938,719	+		Ga0059261_2828	0.41	+1.4
2,938,719	+		Ga0059261_2828	0.41	+0.1
2,938,720	-		Ga0059261_2828	0.41	+1.3
2,938,877	+		Ga0059261_2828	0.54	-1.1
2,938,877	+		Ga0059261_2828	0.54	+0.8
2,938,878	-		Ga0059261_2828	0.55	-0.1
2,938,878	-		Ga0059261_2828	0.55	-0.1
2,938,890	+		Ga0059261_2828	0.56	+1.0
2,938,891	-		Ga0059261_2828	0.56	+0.7
2,938,934	+		Ga0059261_2828	0.59	+0.3
2,938,935	-		Ga0059261_2828	0.59	+0.3
2,938,943	+		Ga0059261_2828	0.60	+0.6
2,938,944	-		Ga0059261_2828	0.60	-1.3
2,938,944	-		Ga0059261_2828	0.60	+0.5
2,939,126	+		Ga0059261_2828	0.75	+0.5
2,939,126	+		Ga0059261_2828	0.75	+1.3
2,939,126	+		Ga0059261_2828	0.75	+0.3
2,939,127	-		Ga0059261_2828	0.75	+0.2
2,939,127	-		Ga0059261_2828	0.75	-0.4
2,939,127	-		Ga0059261_2828	0.75	+1.0
2,939,127	-		Ga0059261_2828	0.75	-0.7
2,939,127	-				+2.0
2,939,127	-		Ga0059261_2828	0.75	-0.2
2,939,127	-		Ga0059261_2828	0.75	-2.1
2,939,171	+		Ga0059261_2828	0.79	-0.2
2,939,171	+		Ga0059261_2828	0.79	+0.0
2,939,171	+		Ga0059261_2828	0.79	-0.8
2,939,172	-		Ga0059261_2828	0.79	-0.4
2,939,172	-		Ga0059261_2828	0.79	+0.2
2,939,172	-		Ga0059261_2828	0.79	-0.7
2,939,172	-		Ga0059261_2828	0.79	+0.6
2,939,249	+		Ga0059261_2828	0.85	+0.1
2,939,250	-		Ga0059261_2828	0.85	-0.7
2,939,250	-		Ga0059261_2828	0.85	+1.3
2,939,250	-		Ga0059261_2828	0.85	+1.0
2,939,276	+		Ga0059261_2828	0.87	+0.1
2,939,276	+		Ga0059261_2828	0.87	-0.1
2,939,276	+		Ga0059261_2828	0.87	-0.4
2,939,277	-		Ga0059261_2828	0.88	+0.7
2,939,277	-		Ga0059261_2828	0.88	-0.2
2,939,277	-		Ga0059261_2828	0.88	+0.7
2,939,288	+		Ga0059261_2828	0.88	-2.1
2,939,289	-		Ga0059261_2828	0.89	+1.0
2,939,289	-		Ga0059261_2828	0.89	-0.9
2,939,289	-		Ga0059261_2828	0.89	-0.7
2,939,289	-		Ga0059261_2828	0.89	+0.9
2,939,289	-		Ga0059261_2828	0.89	-0.3
2,939,289	-		Ga0059261_2828	0.89	-0.2
2,939,428	+				+0.1
2,939,428	+				-0.7
2,939,428	+				+0.2
2,939,428	+				+0.3
2,939,429	-				-0.2
2,939,429	-				+0.2
2,939,429	-				+1.1
2,939,429	-				+0.2
2,939,429	-				-0.1
2,939,443	+				+0.6
2,939,443	+				+0.2
2,939,444	-				+0.3
2,939,467	+				-0.9
2,939,467	+				+1.3
2,939,467	+				-0.4
2,939,467	+				+0.3
2,939,467	+				+0.3
2,939,468	-				+1.0
2,939,472	+				+0.6
2,939,473	-				-0.3
2,939,473	-				-0.8
2,939,473	-				+1.0
2,939,584	+		Ga0059261_2829	0.14	+0.4
2,939,584	+		Ga0059261_2829	0.14	-0.1
2,939,584	+		Ga0059261_2829	0.14	+0.8
2,939,584	+		Ga0059261_2829	0.14	-0.6
2,939,585	-		Ga0059261_2829	0.14	-0.6
2,939,585	-		Ga0059261_2829	0.14	-1.2
2,939,585	-		Ga0059261_2829	0.14	+0.3
2,939,590	+		Ga0059261_2829	0.15	-0.1
2,939,590	+		Ga0059261_2829	0.15	-0.5
2,939,590	+		Ga0059261_2829	0.15	+0.1
2,939,590	+		Ga0059261_2829	0.15	-0.2
2,939,590	+		Ga0059261_2829	0.15	+0.7
2,939,590	+		Ga0059261_2829	0.15	+0.1
2,939,591	-		Ga0059261_2829	0.15	+0.4
2,939,591	-		Ga0059261_2829	0.15	-0.6
2,939,591	-		Ga0059261_2829	0.15	-0.1
2,939,591	-		Ga0059261_2829	0.15	-1.6
2,939,591	-		Ga0059261_2829	0.15	+0.6
2,939,591	-		Ga0059261_2829	0.15	+0.2
2,939,626	+		Ga0059261_2829	0.18	+1.2
2,939,626	+		Ga0059261_2829	0.18	-0.1
2,939,626	+		Ga0059261_2829	0.18	-0.6
2,939,626	+		Ga0059261_2829	0.18	+0.6
2,939,626	+		Ga0059261_2829	0.18	-0.7
2,939,626	+				+2.0
2,939,627	-		Ga0059261_2829	0.18	-0.1
2,939,627	-		Ga0059261_2829	0.18	-0.7
2,939,627	-		Ga0059261_2829	0.18	+0.3
2,939,627	-		Ga0059261_2829	0.18	+0.3
2,939,707	+		Ga0059261_2829	0.26	-0.6
2,939,707	+		Ga0059261_2829	0.26	-0.6
2,939,707	+		Ga0059261_2829	0.26	+0.4
2,939,707	+		Ga0059261_2829	0.26	-0.6
2,939,708	-		Ga0059261_2829	0.26	-0.8
2,939,708	-		Ga0059261_2829	0.26	-0.7
2,939,782	+		Ga0059261_2829	0.33	-0.6
2,939,782	+		Ga0059261_2829	0.33	-0.4
2,939,782	+		Ga0059261_2829	0.33	-0.3
2,939,782	+		Ga0059261_2829	0.33	+0.2
2,939,783	-		Ga0059261_2829	0.33	+0.7
2,939,783	-		Ga0059261_2829	0.33	+0.0
2,939,783	-		Ga0059261_2829	0.33	+0.1
2,940,391	+		Ga0059261_2829	0.88	+0.1
2,940,391	+				-1.0
2,940,391	+		Ga0059261_2829	0.88	-0.3
2,940,392	-		Ga0059261_2829	0.88	-0.6
2,940,392	-		Ga0059261_2829	0.88	+0.2
2,940,403	+		Ga0059261_2829	0.89	-0.4
2,940,403	+		Ga0059261_2829	0.89	-0.6
2,940,403	+		Ga0059261_2829	0.89	+1.3
2,940,403	+		Ga0059261_2829	0.89	-0.8
2,940,403	+		Ga0059261_2829	0.89	-0.7
2,940,404	-		Ga0059261_2829	0.89	-0.3
2,940,404	-		Ga0059261_2829	0.89	+0.5
2,940,404	-		Ga0059261_2829	0.89	+0.3
2,940,404	-		Ga0059261_2829	0.89	-0.1
2,940,404	-		Ga0059261_2829	0.89	+0.4
2,940,404	-		Ga0059261_2829	0.89	-0.1
2,940,471	+				+0.2
2,940,472	-				-0.3
2,940,472	-				+0.1
2,940,505	+				-0.3
2,940,505	+				+0.6
2,940,506	-				-2.4
2,940,506	-				-1.3
2,940,506	-				+0.4
2,940,506	-				-1.0
2,940,511	+				+0.3
2,940,511	+				+1.8
2,940,511	+				+1.6
2,940,511	+				+0.3
2,940,512	-				-0.4
2,940,512	-				+0.3
2,940,600	+				-0.1
2,940,601	-				-1.6
2,940,601	-				+0.3
2,940,601	-				-0.5
2,940,607	+				-1.0
2,940,607	+				-0.1
2,940,608	-				+0.9
2,940,608	-				+0.9
2,940,608	-				-2.6
2,940,608	-				-0.1
2,940,608	-				+0.1
2,940,608	-				-0.2
2,940,783	+		Ga0059261_2830	0.13	+0.4
2,940,783	+		Ga0059261_2830	0.13	-0.6
2,940,784	-		Ga0059261_2830	0.13	+0.3
2,940,784	-		Ga0059261_2830	0.13	-0.4
2,940,784	-		Ga0059261_2830	0.13	+0.9
2,940,899	+		Ga0059261_2830	0.26	+0.8
2,940,899	+		Ga0059261_2830	0.26	-1.0
2,940,923	+		Ga0059261_2830	0.29	-0.2
2,941,345	+		Ga0059261_2830	0.79	+0.3
2,941,346	-		Ga0059261_2830	0.79	-1.0
2,941,346	-		Ga0059261_2830	0.79	+0.8