Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2466

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,548,793	+				-0.2
2,548,794	-				-0.3
2,548,794	-				-0.5
2,548,810	-				-0.3
2,548,810	-				+0.1
2,548,839	+				-0.2
2,548,840	-				-0.2
2,548,917	+		Ga0059261_2465	0.12	+0.7
2,548,917	+		Ga0059261_2465	0.12	+0.2
2,548,917	+		Ga0059261_2465	0.12	+1.1
2,548,918	-		Ga0059261_2465	0.12	-1.5
2,548,918	-		Ga0059261_2465	0.12	-0.3
2,548,918	-		Ga0059261_2465	0.12	-0.3
2,549,154	+		Ga0059261_2465	0.38	+0.1
2,549,154	+		Ga0059261_2465	0.38	-0.4
2,549,154	+		Ga0059261_2465	0.38	-0.3
2,549,154	+		Ga0059261_2465	0.38	-0.0
2,549,155	-		Ga0059261_2465	0.38	-0.5
2,549,155	-		Ga0059261_2465	0.38	-1.0
2,549,155	-		Ga0059261_2465	0.38	+0.3
2,549,155	-		Ga0059261_2465	0.38	+0.8
2,549,155	-		Ga0059261_2465	0.38	-0.0
2,549,155	-		Ga0059261_2465	0.38	+0.2
2,549,155	-		Ga0059261_2465	0.38	+0.5
2,549,155	-		Ga0059261_2465	0.38	-0.8
2,549,313	-		Ga0059261_2465	0.55	+0.1
2,549,412	+		Ga0059261_2465	0.66	-0.5
2,549,412	+		Ga0059261_2465	0.66	+0.1
2,549,412	+		Ga0059261_2465	0.66	-0.7
2,549,412	+		Ga0059261_2465	0.66	-0.1
2,549,412	+		Ga0059261_2465	0.66	+0.2
2,549,413	-				+1.1
2,549,413	-		Ga0059261_2465	0.66	-0.3
2,549,413	-		Ga0059261_2465	0.66	+1.3
2,549,413	-		Ga0059261_2465	0.66	+0.6
2,549,413	-		Ga0059261_2465	0.66	+0.5
2,549,413	-		Ga0059261_2465	0.66	+1.0
2,549,413	-		Ga0059261_2465	0.66	-0.2
2,549,425	-		Ga0059261_2465	0.67	-0.3
2,549,425	-		Ga0059261_2465	0.67	-0.2
2,549,425	-		Ga0059261_2465	0.67	+0.9
2,549,592	+		Ga0059261_2465	0.85	-0.5
2,549,592	+		Ga0059261_2465	0.85	-0.1
2,549,593	-		Ga0059261_2465	0.85	-0.5
2,549,593	-		Ga0059261_2465	0.85	+0.4
2,549,632	-		Ga0059261_2465	0.89	+0.6
2,549,632	-		Ga0059261_2465	0.89	+0.5
2,549,720	-				+0.7
2,549,775	+				+0.3
2,549,776	-				-0.5
2,549,829	+				+0.5
2,549,829	+				+1.7
2,549,830	-				+0.1
2,549,830	-				+0.4
2,549,916	+		Ga0059261_2466	0.16	+0.7
2,549,916	+		Ga0059261_2466	0.16	+0.5
2,549,916	+		Ga0059261_2466	0.16	+0.6
2,549,916	+		Ga0059261_2466	0.16	+0.8
2,549,916	+		Ga0059261_2466	0.16	+0.6
2,549,916	+		Ga0059261_2466	0.16	+1.0
2,549,917	-		Ga0059261_2466	0.16	+0.7
2,549,917	-		Ga0059261_2466	0.16	-1.1
2,549,917	-		Ga0059261_2466	0.16	+0.6
2,549,917	-		Ga0059261_2466	0.16	+0.4
2,549,917	-		Ga0059261_2466	0.16	+0.9
2,549,917	-		Ga0059261_2466	0.16	+1.1
2,549,917	-		Ga0059261_2466	0.16	-0.1
2,549,917	-		Ga0059261_2466	0.16	+0.2
2,549,917	-		Ga0059261_2466	0.16	+1.2
2,549,917	-		Ga0059261_2466	0.16	+1.1
2,550,101	+		Ga0059261_2466	0.36	+1.1
2,550,214	-		Ga0059261_2466	0.48	+0.2
2,550,214	-		Ga0059261_2466	0.48	+0.5
2,550,414	+		Ga0059261_2466	0.69	+0.7
2,550,414	+		Ga0059261_2466	0.69	+0.8
2,550,414	+		Ga0059261_2466	0.69	+1.4
2,550,415	-		Ga0059261_2466	0.69	+0.3
2,550,415	-		Ga0059261_2466	0.69	+0.4
2,550,415	-		Ga0059261_2466	0.69	+0.8
2,550,434	+		Ga0059261_2466	0.71	+2.3
2,550,434	+		Ga0059261_2466	0.71	+1.0
2,550,434	+		Ga0059261_2466	0.71	+0.3
2,550,434	+		Ga0059261_2466	0.71	+0.9
2,550,434	+		Ga0059261_2466	0.71	+0.7
2,550,434	+		Ga0059261_2466	0.71	+0.8
2,550,434	+		Ga0059261_2466	0.71	+0.9
2,550,435	-		Ga0059261_2466	0.71	+0.5
2,550,435	-		Ga0059261_2466	0.71	+0.0
2,550,435	-		Ga0059261_2466	0.71	+0.2
2,550,435	-		Ga0059261_2466	0.71	+0.3
2,550,435	-		Ga0059261_2466	0.71	+0.5
2,550,493	+		Ga0059261_2466	0.77	+0.6
2,550,661	+				+0.4
2,550,840	+		Ga0059261_2467	0.13	-0.9
2,550,840	+		Ga0059261_2467	0.13	-0.4
2,550,841	-		Ga0059261_2467	0.13	+0.6
2,550,841	-		Ga0059261_2467	0.13	-0.6
2,550,841	-		Ga0059261_2467	0.13	-0.3
2,550,842	+		Ga0059261_2467	0.13	+0.4
2,550,876	+		Ga0059261_2467	0.17	-0.2
2,550,876	+		Ga0059261_2467	0.17	+0.1
2,550,876	+		Ga0059261_2467	0.17	-0.0
2,550,876	+		Ga0059261_2467	0.17	+0.4
2,550,876	+		Ga0059261_2467	0.17	-0.6
2,550,876	+		Ga0059261_2467	0.17	+0.3
2,550,876	+		Ga0059261_2467	0.17	-0.3
2,550,876	+		Ga0059261_2467	0.17	-0.4
2,550,877	-		Ga0059261_2467	0.17	+0.6
2,550,877	-		Ga0059261_2467	0.17	+0.1
2,550,877	-		Ga0059261_2467	0.17	+0.6
2,550,877	-		Ga0059261_2467	0.17	-0.8
2,550,877	-		Ga0059261_2467	0.17	-0.2
2,550,877	-		Ga0059261_2467	0.17	-0.1
2,551,084	+		Ga0059261_2467	0.39	+0.5
2,551,084	+		Ga0059261_2467	0.39	-0.3
2,551,085	-		Ga0059261_2467	0.39	+0.2
2,551,085	-		Ga0059261_2467	0.39	+0.9
2,551,137	+		Ga0059261_2467	0.45	+0.8
2,551,137	+		Ga0059261_2467	0.45	-0.6
2,551,137	+		Ga0059261_2467	0.45	-1.2
2,551,137	+		Ga0059261_2467	0.45	+0.3
2,551,137	+		Ga0059261_2467	0.45	-0.1
2,551,137	+				+2.1
2,551,137	+		Ga0059261_2467	0.45	+0.6
2,551,137	+		Ga0059261_2467	0.45	+0.2
2,551,137	+		Ga0059261_2467	0.45	+0.1
2,551,137	+		Ga0059261_2467	0.45	+1.1
2,551,138	-		Ga0059261_2467	0.45	-0.3
2,551,138	-		Ga0059261_2467	0.45	-0.4
2,551,138	-		Ga0059261_2467	0.45	-0.1
2,551,138	-		Ga0059261_2467	0.45	+0.3
2,551,138	-		Ga0059261_2467	0.45	+0.4
2,551,138	-		Ga0059261_2467	0.45	+1.1
2,551,138	-		Ga0059261_2467	0.45	-0.9
2,551,138	-		Ga0059261_2467	0.45	-0.6
2,551,138	-		Ga0059261_2467	0.45	-0.8
2,551,138	-		Ga0059261_2467	0.45	+0.2
2,551,138	-		Ga0059261_2467	0.45	-0.8
2,551,138	-		Ga0059261_2467	0.45	-0.3
2,551,138	-		Ga0059261_2467	0.45	-1.1
2,551,208	-		Ga0059261_2467	0.52	+0.1
2,551,344	+		Ga0059261_2467	0.67	+0.4
2,551,344	+		Ga0059261_2467	0.67	-0.2
2,551,344	+		Ga0059261_2467	0.67	-0.3
2,551,344	+		Ga0059261_2467	0.67	-0.5
2,551,344	+		Ga0059261_2467	0.67	+0.6
2,551,345	-		Ga0059261_2467	0.67	+0.5
2,551,356	+		Ga0059261_2467	0.68	+0.1
2,551,356	+		Ga0059261_2467	0.68	-1.7
2,551,356	+		Ga0059261_2467	0.68	-0.1
2,551,356	+		Ga0059261_2467	0.68	+0.2
2,551,357	-		Ga0059261_2467	0.68	-2.2
2,551,357	-		Ga0059261_2467	0.68	-1.1
2,551,357	-		Ga0059261_2467	0.68	+0.1
2,551,357	-		Ga0059261_2467	0.68	+0.4
2,551,357	-		Ga0059261_2467	0.68	-1.5
2,551,357	-		Ga0059261_2467	0.68	+0.1
2,551,357	-		Ga0059261_2467	0.68	-0.9
2,551,357	-		Ga0059261_2467	0.68	-0.5
2,551,357	-		Ga0059261_2467	0.68	+0.1
2,551,368	+		Ga0059261_2467	0.70	-0.4
2,551,368	+		Ga0059261_2467	0.70	+1.1
2,551,368	+		Ga0059261_2467	0.70	+0.5
2,551,368	+		Ga0059261_2467	0.70	-2.5
2,551,369	-		Ga0059261_2467	0.70	-1.8
2,551,369	-		Ga0059261_2467	0.70	+0.8
2,551,506	+		Ga0059261_2467	0.84	-1.4
2,551,506	+		Ga0059261_2467	0.84	+0.4
2,551,506	+		Ga0059261_2467	0.84	+0.5
2,551,506	+		Ga0059261_2467	0.84	-0.5
2,551,507	-		Ga0059261_2467	0.84	-0.4
2,551,507	-		Ga0059261_2467	0.84	+0.4
2,551,507	-		Ga0059261_2467	0.84	-0.7
2,551,507	-		Ga0059261_2467	0.84	+0.0
2,551,507	-				+0.1
2,551,507	-		Ga0059261_2467	0.84	+0.5
2,551,538	+		Ga0059261_2467	0.88	+0.9
2,551,538	+		Ga0059261_2467	0.88	+0.1
2,551,538	+		Ga0059261_2467	0.88	-0.2
2,551,538	+		Ga0059261_2467	0.88	+0.2
2,551,538	+		Ga0059261_2467	0.88	-0.8
2,551,538	+		Ga0059261_2467	0.88	+0.1
2,551,538	+		Ga0059261_2467	0.88	-0.3
2,551,538	+		Ga0059261_2467	0.88	-1.3
2,551,538	+		Ga0059261_2467	0.88	-0.6
2,551,538	+		Ga0059261_2467	0.88	-0.3
2,551,539	-		Ga0059261_2467	0.88	-0.5