Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2363

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,462,872	+				+0.4
2,462,872	+				+0.4
2,462,873	-				+1.0
2,462,967	-				-0.9
2,462,967	-				-0.1
2,463,032	-		Ga0059261_2362	0.16	+0.5
2,463,109	+		Ga0059261_2362	0.24	-0.5
2,463,109	+		Ga0059261_2362	0.24	+1.1
2,463,109	+		Ga0059261_2362	0.24	+0.6
2,463,110	-		Ga0059261_2362	0.24	+0.2
2,463,110	-		Ga0059261_2362	0.24	-0.5
2,463,110	-		Ga0059261_2362	0.24	-0.5
2,463,110	-		Ga0059261_2362	0.24	+0.4
2,463,110	-		Ga0059261_2362	0.24	+0.2
2,463,184	+		Ga0059261_2362	0.31	+0.5
2,463,184	+		Ga0059261_2362	0.31	-0.2
2,463,184	+		Ga0059261_2362	0.31	+0.0
2,463,185	-		Ga0059261_2362	0.32	+0.7
2,463,185	-		Ga0059261_2362	0.32	-0.4
2,463,185	-		Ga0059261_2362	0.32	+0.6
2,463,185	-		Ga0059261_2362	0.32	+0.7
2,463,224	-		Ga0059261_2362	0.35	+1.5
2,463,355	+		Ga0059261_2362	0.49	-0.5
2,463,363	-		Ga0059261_2362	0.49	-0.1
2,463,685	+		Ga0059261_2362	0.82	+0.6
2,463,685	+		Ga0059261_2362	0.82	-0.9
2,463,685	+		Ga0059261_2362	0.82	+1.1
2,463,685	+		Ga0059261_2362	0.82	+1.3
2,463,685	+		Ga0059261_2362	0.82	-0.4
2,463,685	+		Ga0059261_2362	0.82	+0.5
2,463,685	+		Ga0059261_2362	0.82	+0.2
2,463,685	+		Ga0059261_2362	0.82	-0.8
2,463,685	+		Ga0059261_2362	0.82	+0.4
2,463,685	+		Ga0059261_2362	0.82	-0.8
2,463,686	-		Ga0059261_2362	0.82	+0.1
2,463,686	-		Ga0059261_2362	0.82	-0.0
2,463,686	-		Ga0059261_2362	0.82	+1.8
2,463,686	-		Ga0059261_2362	0.82	-0.1
2,463,686	-		Ga0059261_2362	0.82	+0.2
2,463,686	-		Ga0059261_2362	0.82	+0.2
2,463,686	-		Ga0059261_2362	0.82	+1.1
2,463,686	-		Ga0059261_2362	0.82	+0.3
2,463,686	-		Ga0059261_2362	0.82	+0.4
2,463,686	-		Ga0059261_2362	0.82	+0.4
2,463,686	-		Ga0059261_2362	0.82	+0.3
2,463,726	-		Ga0059261_2362	0.86	+0.3
2,463,741	+		Ga0059261_2362	0.87	+0.1
2,463,741	+				+1.5
2,463,741	+		Ga0059261_2362	0.87	+0.2
2,463,741	+		Ga0059261_2362	0.87	+0.8
2,463,741	+		Ga0059261_2362	0.87	+0.3
2,463,741	+		Ga0059261_2362	0.87	-0.1
2,463,742	-		Ga0059261_2362	0.87	+0.5
2,463,742	-		Ga0059261_2362	0.87	-0.5
2,463,963	+		Ga0059261_2363	0.30	+0.3
2,463,963	+		Ga0059261_2363	0.30	-0.2
2,463,963	+		Ga0059261_2363	0.30	+0.3
2,463,963	+		Ga0059261_2363	0.30	-0.7
2,463,963	+		Ga0059261_2363	0.30	+0.1
2,463,964	-		Ga0059261_2363	0.30	+0.7
2,463,964	-		Ga0059261_2363	0.30	+0.6
2,463,964	-		Ga0059261_2363	0.30	-0.0
2,463,964	-		Ga0059261_2363	0.30	+0.2
2,463,964	-		Ga0059261_2363	0.30	+0.0
2,464,002	+		Ga0059261_2363	0.42	-0.2
2,464,002	+		Ga0059261_2363	0.42	+0.4
2,464,003	-		Ga0059261_2363	0.42	+0.4
2,464,050	+		Ga0059261_2363	0.56	+0.2
2,464,050	+		Ga0059261_2363	0.56	-0.3
2,464,050	+		Ga0059261_2363	0.56	+1.5
2,464,051	-				+0.5
2,464,051	-		Ga0059261_2363	0.57	-0.2
2,464,051	-		Ga0059261_2363	0.57	+0.6
2,464,051	-		Ga0059261_2363	0.57	+0.2
2,464,051	-		Ga0059261_2363	0.57	+0.2
2,464,192	+				-0.6
2,464,192	+				+2.1
2,464,193	-				-1.3
2,464,193	-				-1.7
2,464,275	+				+0.5
2,464,275	+				-0.5
2,464,275	+				-1.2
2,464,275	+				-0.0
2,464,275	+				-0.2
2,464,275	+				+0.1
2,464,275	+				+0.8
2,464,276	-				-0.4
2,464,276	-				+0.5
2,464,276	-				-0.5
2,464,276	-				-0.2
2,464,276	-				-0.5
2,464,276	-				+0.3
2,464,276	-				-0.5
2,464,276	-				+1.7
2,464,276	-				-0.8
2,464,365	+				+0.6
2,464,365	+				+0.1
2,464,366	-				+0.4
2,464,366	-				-0.7
2,464,366	-				-1.1
2,464,375	+				-0.1
2,464,375	+				+0.3
2,464,375	+				-1.9
2,464,375	+				+0.7
2,464,375	+				+0.0
2,464,376	-				+0.2
2,464,376	-				-2.0
2,464,389	-				+0.6
2,464,521	-		Ga0059261_2364	0.11	-0.3
2,464,834	+		Ga0059261_2364	0.25	+0.0
2,464,835	-		Ga0059261_2364	0.25	-0.2
2,464,835	-		Ga0059261_2364	0.25	-0.1
2,464,848	+		Ga0059261_2364	0.26	+0.3
2,464,848	+		Ga0059261_2364	0.26	-0.4
2,464,848	+		Ga0059261_2364	0.26	-0.2
2,464,848	+		Ga0059261_2364	0.26	-0.5
2,464,848	+		Ga0059261_2364	0.26	-1.3
2,464,848	+		Ga0059261_2364	0.26	+0.6
2,464,848	+		Ga0059261_2364	0.26	+0.1
2,464,848	+		Ga0059261_2364	0.26	-0.2
2,464,848	+		Ga0059261_2364	0.26	-0.2
2,464,848	+		Ga0059261_2364	0.26	-0.4
2,464,848	+		Ga0059261_2364	0.26	-0.1
2,464,848	+		Ga0059261_2364	0.26	+0.6
2,464,848	+		Ga0059261_2364	0.26	+0.6
2,464,848	+		Ga0059261_2364	0.26	+0.9
2,464,849	-		Ga0059261_2364	0.26	-0.7
2,464,849	-		Ga0059261_2364	0.26	+0.3
2,464,849	-		Ga0059261_2364	0.26	-0.3
2,464,849	-				-0.5
2,464,849	-		Ga0059261_2364	0.26	-2.7
2,464,849	-		Ga0059261_2364	0.26	+0.2
2,464,849	-		Ga0059261_2364	0.26	-0.1
2,464,849	-		Ga0059261_2364	0.26	-0.7
2,464,849	-		Ga0059261_2364	0.26	+0.4
2,464,849	-		Ga0059261_2364	0.26	+0.1
2,464,849	-		Ga0059261_2364	0.26	+0.3
2,464,849	-		Ga0059261_2364	0.26	-0.8
2,464,849	-		Ga0059261_2364	0.26	+0.8
2,464,849	-		Ga0059261_2364	0.26	-0.4
2,464,849	-		Ga0059261_2364	0.26	-0.6
2,464,857	+		Ga0059261_2364	0.26	-1.2
2,464,857	+		Ga0059261_2364	0.26	-0.1
2,464,857	+		Ga0059261_2364	0.26	-0.4
2,464,858	-		Ga0059261_2364	0.26	-0.8
2,464,858	-		Ga0059261_2364	0.26	-0.2
2,464,958	+		Ga0059261_2364	0.30	+2.0
2,464,958	+		Ga0059261_2364	0.30	+0.3
2,464,959	-		Ga0059261_2364	0.31	+1.3
2,464,959	-		Ga0059261_2364	0.31	-0.2
2,464,959	-		Ga0059261_2364	0.31	+0.1
2,464,959	-		Ga0059261_2364	0.31	+0.1
2,465,163	+		Ga0059261_2364	0.39	-0.5
2,465,163	+		Ga0059261_2364	0.39	+0.6
2,465,163	+		Ga0059261_2364	0.39	+0.9
2,465,163	+		Ga0059261_2364	0.39	+1.1
2,465,163	+		Ga0059261_2364	0.39	-0.1
2,465,163	+		Ga0059261_2364	0.39	-0.2
2,465,163	+		Ga0059261_2364	0.39	-0.3
2,465,163	+		Ga0059261_2364	0.39	+0.1
2,465,163	+		Ga0059261_2364	0.39	+0.9
2,465,163	+		Ga0059261_2364	0.39	-0.2
2,465,163	+		Ga0059261_2364	0.39	-0.3
2,465,163	+		Ga0059261_2364	0.39	+0.1
2,465,163	+		Ga0059261_2364	0.39	+0.6
2,465,164	-		Ga0059261_2364	0.39	+0.5
2,465,164	-		Ga0059261_2364	0.39	-0.8
2,465,164	-		Ga0059261_2364	0.39	+0.3
2,465,164	-		Ga0059261_2364	0.39	+2.3
2,465,164	-		Ga0059261_2364	0.39	-0.0
2,465,164	-		Ga0059261_2364	0.39	+0.1
2,465,164	-		Ga0059261_2364	0.39	-1.7
2,465,164	-		Ga0059261_2364	0.39	-0.4
2,465,164	-		Ga0059261_2364	0.39	+0.3
2,465,164	-		Ga0059261_2364	0.39	-0.9
2,465,164	-		Ga0059261_2364	0.39	+0.1
2,465,164	-		Ga0059261_2364	0.39	-0.5
2,465,164	-		Ga0059261_2364	0.39	+0.1
2,465,164	-		Ga0059261_2364	0.39	-0.9
2,465,164	-		Ga0059261_2364	0.39	-0.1
2,465,164	-		Ga0059261_2364	0.39	+1.4
2,465,164	-		Ga0059261_2364	0.39	+0.0
2,465,164	-		Ga0059261_2364	0.39	-0.2
2,465,164	-		Ga0059261_2364	0.39	+0.5