Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2267

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,369,740	+				-1.3
2,369,740	+				-0.6
2,369,740	+				-0.2
2,369,740	+				-0.2
2,369,814	-				+1.7
2,369,860	+				-2.2
2,369,860	+				+0.4
2,369,861	-				-0.4
2,369,869	+				-0.4
2,369,869	+				+0.0
2,369,869	+				-1.4
2,369,870	-				+0.6
2,369,870	-				+0.6
2,369,919	-				-2.2
2,369,936	+				+0.1
2,369,937	-				-0.8
2,370,144	+		Ga0059261_2266	0.31	-1.3
2,370,144	+		Ga0059261_2266	0.31	-2.2
2,370,144	+				+0.1
2,370,145	-		Ga0059261_2266	0.31	+0.2
2,370,330	+		Ga0059261_2266	0.59	-2.0
2,370,330	+		Ga0059261_2266	0.59	+0.5
2,370,330	+		Ga0059261_2266	0.59	-0.6
2,370,330	+		Ga0059261_2266	0.59	-0.0
2,370,330	+		Ga0059261_2266	0.59	-1.1
2,370,330	+		Ga0059261_2266	0.59	-0.7
2,370,331	-		Ga0059261_2266	0.59	-1.2
2,370,331	-		Ga0059261_2266	0.59	-0.9
2,370,331	-		Ga0059261_2266	0.59	+0.7
2,370,331	-		Ga0059261_2266	0.59	-0.0
2,370,549	+				-0.0
2,370,549	+				+0.9
2,370,549	+				-0.6
2,370,549	+				-0.3
2,370,549	+				-2.1
2,370,549	+				-1.5
2,370,549	+				+0.3
2,370,550	-				-0.4
2,370,550	-				-1.0
2,370,550	-				-0.9
2,370,550	-				-0.1
2,370,550	-				-0.4
2,370,551	+				+0.0
2,370,552	-				-0.3
2,370,552	-				-0.0
2,370,622	+				+0.3
2,370,622	+				-0.7
2,370,622	+				-0.9
2,370,623	-				-1.0
2,370,623	-				-3.0
2,370,736	+		Ga0059261_2267	0.12	-3.9
2,370,737	-		Ga0059261_2267	0.12	-1.4
2,370,865	+		Ga0059261_2267	0.27	-2.7
2,370,865	+		Ga0059261_2267	0.27	-1.4
2,370,865	+		Ga0059261_2267	0.27	-2.0
2,370,865	+		Ga0059261_2267	0.27	-1.3
2,370,865	+		Ga0059261_2267	0.27	-1.9
2,370,865	+		Ga0059261_2267	0.27	-0.3
2,370,865	+		Ga0059261_2267	0.27	-2.1
2,370,865	+		Ga0059261_2267	0.27	-1.6
2,370,866	-		Ga0059261_2267	0.27	-0.5
2,370,866	-		Ga0059261_2267	0.27	-0.1
2,370,866	-		Ga0059261_2267	0.27	-2.9
2,370,866	-		Ga0059261_2267	0.27	-2.0
2,370,973	+		Ga0059261_2267	0.39	-0.7
2,370,973	+		Ga0059261_2267	0.39	-0.7
2,370,974	-		Ga0059261_2267	0.39	-1.4
2,370,974	-		Ga0059261_2267	0.39	-0.4
2,370,974	-		Ga0059261_2267	0.39	-0.7
2,370,974	-		Ga0059261_2267	0.39	-0.9
2,370,976	+		Ga0059261_2267	0.39	-0.8
2,370,976	+		Ga0059261_2267	0.39	-2.0
2,370,976	+		Ga0059261_2267	0.39	-2.6
2,370,976	+		Ga0059261_2267	0.39	-1.4
2,370,976	+		Ga0059261_2267	0.39	-2.2
2,370,976	+		Ga0059261_2267	0.39	-1.5
2,370,976	+		Ga0059261_2267	0.39	-0.5
2,370,977	-		Ga0059261_2267	0.39	-1.4
2,370,977	-		Ga0059261_2267	0.39	-1.2
2,370,977	-		Ga0059261_2267	0.39	-1.6
2,370,977	-		Ga0059261_2267	0.39	-0.6
2,370,977	-		Ga0059261_2267	0.39	-2.0
2,371,015	+		Ga0059261_2267	0.44	-0.2
2,371,027	-		Ga0059261_2267	0.45	-1.6
2,371,168	+		Ga0059261_2267	0.61	-1.2
2,371,168	+		Ga0059261_2267	0.61	-0.1
2,371,168	+		Ga0059261_2267	0.61	-2.0
2,371,168	+		Ga0059261_2267	0.61	+0.1
2,371,168	+		Ga0059261_2267	0.61	-0.4
2,371,168	+		Ga0059261_2267	0.61	-0.9
2,371,168	+		Ga0059261_2267	0.61	-1.1
2,371,168	+		Ga0059261_2267	0.61	-1.1
2,371,169	-		Ga0059261_2267	0.61	-2.3
2,371,169	-		Ga0059261_2267	0.61	-0.7
2,371,169	-		Ga0059261_2267	0.61	-0.6
2,371,169	-		Ga0059261_2267	0.61	-1.4
2,371,169	-		Ga0059261_2267	0.61	-1.0
2,371,169	-		Ga0059261_2267	0.61	-0.0
2,371,169	-		Ga0059261_2267	0.61	-2.2
2,371,169	-		Ga0059261_2267	0.61	-0.8
2,371,169	-		Ga0059261_2267	0.61	-1.6
2,371,201	+		Ga0059261_2267	0.65	-1.0
2,371,201	+		Ga0059261_2267	0.65	-1.4
2,371,201	+		Ga0059261_2267	0.65	-1.6
2,371,202	-		Ga0059261_2267	0.65	-0.9
2,371,202	-		Ga0059261_2267	0.65	-1.4
2,371,202	-		Ga0059261_2267	0.65	-1.5
2,371,346	-		Ga0059261_2267	0.82	-1.2
2,371,346	-		Ga0059261_2267	0.82	-3.0
2,371,481	-				+0.4
2,371,708	+		Ga0059261_2268	0.26	+2.7
2,371,708	+		Ga0059261_2268	0.26	+1.1
2,371,708	+		Ga0059261_2268	0.26	+1.1
2,371,708	+				-1.7
2,371,709	-		Ga0059261_2268	0.26	+0.2
2,371,777	+		Ga0059261_2268	0.36	-0.1
2,371,777	+		Ga0059261_2268	0.36	-0.3
2,371,777	+		Ga0059261_2268	0.36	-0.3
2,371,778	-		Ga0059261_2268	0.37	-0.3
2,371,778	-		Ga0059261_2268	0.37	+0.2
2,371,778	-		Ga0059261_2268	0.37	+0.1
2,371,855	+		Ga0059261_2268	0.49	-0.1
2,371,855	+		Ga0059261_2268	0.49	+0.9
2,371,856	-		Ga0059261_2268	0.49	+0.4
2,372,100	-		Ga0059261_2268	0.87	+0.6
2,372,100	-		Ga0059261_2268	0.87	+0.3
2,372,100	-				-0.4
2,372,104	+		Ga0059261_2268	0.88	+0.7
2,372,104	+		Ga0059261_2268	0.88	+0.1
2,372,104	+		Ga0059261_2268	0.88	-0.2
2,372,104	+		Ga0059261_2268	0.88	-0.4
2,372,104	+		Ga0059261_2268	0.88	-0.4
2,372,104	+		Ga0059261_2268	0.88	+0.7
2,372,104	+		Ga0059261_2268	0.88	-0.0
2,372,104	+		Ga0059261_2268	0.88	-0.9
2,372,104	+		Ga0059261_2268	0.88	+0.3
2,372,104	+		Ga0059261_2268	0.88	+0.8
2,372,105	-		Ga0059261_2268	0.88	-1.8
2,372,105	-		Ga0059261_2268	0.88	-0.9
2,372,105	-		Ga0059261_2268	0.88	-0.9
2,372,105	-		Ga0059261_2268	0.88	-0.2
2,372,105	-		Ga0059261_2268	0.88	+0.4
2,372,105	-		Ga0059261_2268	0.88	-0.1
2,372,105	-		Ga0059261_2268	0.88	-1.2
2,372,105	-		Ga0059261_2268	0.88	-0.1
2,372,105	-		Ga0059261_2268	0.88	+0.6
2,372,105	-		Ga0059261_2268	0.88	+0.3
2,372,105	-		Ga0059261_2268	0.88	+1.4
2,372,236	+				+0.1
2,372,236	+				+0.1
2,372,237	-				+1.0
2,372,237	-				+0.4
2,372,249	+				-0.4
2,372,249	+				+0.1
2,372,249	+				-0.4
2,372,250	-				+0.2
2,372,250	-				-0.4
2,372,250	-				-0.5
2,372,250	-				+0.8
2,372,250	-				+0.5
2,372,419	+		Ga0059261_2269	0.13	-0.7
2,372,419	+		Ga0059261_2269	0.13	-0.1
2,372,419	+		Ga0059261_2269	0.13	-0.1
2,372,419	+		Ga0059261_2269	0.13	-0.1
2,372,419	+		Ga0059261_2269	0.13	+0.1
2,372,419	+		Ga0059261_2269	0.13	+1.8
2,372,419	+		Ga0059261_2269	0.13	+0.8
2,372,420	-		Ga0059261_2269	0.13	+0.9
2,372,420	-		Ga0059261_2269	0.13	+0.2
2,372,427	+		Ga0059261_2269	0.14	+0.4
2,372,427	+		Ga0059261_2269	0.14	+1.2
2,372,427	+		Ga0059261_2269	0.14	-0.3
2,372,428	-		Ga0059261_2269	0.14	+0.1
2,372,428	-		Ga0059261_2269	0.14	+0.0
2,372,428	-		Ga0059261_2269	0.14	-0.1
2,372,428	-		Ga0059261_2269	0.14	+1.6
2,372,428	-		Ga0059261_2269	0.14	-0.3