Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2185

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,295,074	-		Ga0059261_2183	0.27	-0.6
2,295,074	-		Ga0059261_2183	0.27	+0.5
2,295,074	-		Ga0059261_2183	0.27	-1.4
2,295,074	-		Ga0059261_2183	0.27	-0.2
2,295,115	+		Ga0059261_2183	0.37	-0.2
2,295,187	+		Ga0059261_2183	0.53	-0.7
2,295,187	+		Ga0059261_2183	0.53	-0.3
2,295,187	+		Ga0059261_2183	0.53	-1.0
2,295,188	-		Ga0059261_2183	0.53	+1.1
2,295,188	-		Ga0059261_2183	0.53	-1.1
2,295,188	-		Ga0059261_2183	0.53	+1.1
2,295,188	-				-0.9
2,295,188	-		Ga0059261_2183	0.53	-0.8
2,295,188	-		Ga0059261_2183	0.53	-0.5
2,295,206	-		Ga0059261_2183	0.57	-0.2
2,295,206	-		Ga0059261_2183	0.57	+1.0
2,295,262	+		Ga0059261_2183	0.70	+0.1
2,295,262	+		Ga0059261_2183	0.70	+0.4
2,295,262	+		Ga0059261_2183	0.70	-1.2
2,295,262	+		Ga0059261_2183	0.70	+0.0
2,295,263	-		Ga0059261_2183	0.70	-0.2
2,295,263	-		Ga0059261_2183	0.70	-1.2
2,295,263	-		Ga0059261_2183	0.70	-1.0
2,295,263	-		Ga0059261_2183	0.70	-0.3
2,295,263	-		Ga0059261_2183	0.70	+0.8
2,295,263	-		Ga0059261_2183	0.70	-0.6
2,295,263	-		Ga0059261_2183	0.70	-0.1
2,295,474	+		Ga0059261_2184	0.16	-2.7
2,295,474	+		Ga0059261_2184	0.16	-0.2
2,295,474	+		Ga0059261_2184	0.16	-0.6
2,295,474	+		Ga0059261_2184	0.16	-0.4
2,295,474	+				-0.2
2,295,475	-		Ga0059261_2184	0.16	+1.1
2,295,475	-		Ga0059261_2184	0.16	-0.9
2,295,475	-		Ga0059261_2184	0.16	-0.9
2,295,475	-		Ga0059261_2184	0.16	-0.8
2,295,475	-		Ga0059261_2184	0.16	-0.2
2,295,501	+		Ga0059261_2184	0.20	+0.5
2,295,501	+		Ga0059261_2184	0.20	+0.1
2,295,502	-		Ga0059261_2184	0.21	-0.9
2,295,528	+		Ga0059261_2184	0.25	-0.5
2,295,528	+		Ga0059261_2184	0.25	+0.6
2,295,528	+		Ga0059261_2184	0.25	-0.6
2,295,529	-		Ga0059261_2184	0.25	-0.5
2,295,529	-		Ga0059261_2184	0.25	+0.5
2,295,529	-		Ga0059261_2184	0.25	-1.2
2,295,529	-		Ga0059261_2184	0.25	-0.4
2,295,541	-		Ga0059261_2184	0.27	-0.2
2,295,637	+		Ga0059261_2184	0.43	+2.7
2,295,638	-		Ga0059261_2184	0.43	-0.6
2,295,638	-		Ga0059261_2184	0.43	+0.0
2,295,638	-		Ga0059261_2184	0.43	-0.3
2,295,663	+		Ga0059261_2184	0.48	-0.5
2,295,731	-		Ga0059261_2184	0.59	+0.3
2,295,731	-		Ga0059261_2184	0.59	-0.7
2,295,771	+		Ga0059261_2184	0.66	-0.6
2,295,771	+		Ga0059261_2184	0.66	-0.0
2,295,771	+		Ga0059261_2184	0.66	-0.7
2,295,771	+		Ga0059261_2184	0.66	+0.8
2,295,771	+		Ga0059261_2184	0.66	-1.5
2,295,772	-		Ga0059261_2184	0.66	-0.2
2,295,780	+		Ga0059261_2184	0.67	+0.2
2,295,780	+		Ga0059261_2184	0.67	-0.7
2,295,780	+		Ga0059261_2184	0.67	-0.6
2,295,780	+		Ga0059261_2184	0.67	-0.5
2,295,780	+		Ga0059261_2184	0.67	+0.0
2,295,780	+		Ga0059261_2184	0.67	+0.3
2,295,781	-		Ga0059261_2184	0.68	+0.6
2,295,781	-		Ga0059261_2184	0.68	+0.0
2,295,781	-		Ga0059261_2184	0.68	+0.0
2,295,781	-		Ga0059261_2184	0.68	+0.2
2,295,781	-		Ga0059261_2184	0.68	+0.4
2,295,781	-		Ga0059261_2184	0.68	-0.3
2,295,792	+		Ga0059261_2184	0.69	-0.2
2,295,793	-		Ga0059261_2184	0.70	-0.6
2,295,958	+				-0.0
2,295,958	+				+0.8
2,295,958	+				-0.0
2,295,958	+				+0.3
2,295,958	+				+1.0
2,295,959	-				+0.4
2,295,959	-				-0.7
2,295,959	-				-0.8
2,295,959	-				-0.5
2,295,959	-				+0.0
2,295,996	+				+1.3
2,295,996	+				-0.1
2,296,132	+		Ga0059261_2185	0.14	-2.2
2,296,132	+		Ga0059261_2185	0.14	-1.9
2,296,132	+				+1.1
2,296,132	+		Ga0059261_2185	0.14	-0.3
2,296,133	-		Ga0059261_2185	0.15	-0.6
2,296,133	-		Ga0059261_2185	0.15	-1.5
2,296,186	-		Ga0059261_2185	0.23	-1.5
2,296,248	+		Ga0059261_2185	0.34	-0.4
2,296,248	+		Ga0059261_2185	0.34	+0.0
2,296,248	+		Ga0059261_2185	0.34	-0.7
2,296,249	-		Ga0059261_2185	0.34	-0.2
2,296,249	-		Ga0059261_2185	0.34	-2.3
2,296,249	-		Ga0059261_2185	0.34	-1.3
2,296,270	+		Ga0059261_2185	0.38	-0.7
2,296,270	+		Ga0059261_2185	0.38	-1.2
2,296,271	-		Ga0059261_2185	0.38	-0.3
2,296,271	-		Ga0059261_2185	0.38	-2.3
2,296,271	-		Ga0059261_2185	0.38	-0.7
2,296,271	-		Ga0059261_2185	0.38	-0.5
2,296,271	-		Ga0059261_2185	0.38	-0.9
2,296,271	-		Ga0059261_2185	0.38	-1.6
2,296,271	-		Ga0059261_2185	0.38	-2.5
2,296,272	+		Ga0059261_2185	0.38	-0.5
2,296,272	+		Ga0059261_2185	0.38	-1.5
2,296,272	+		Ga0059261_2185	0.38	-0.5
2,296,272	+		Ga0059261_2185	0.38	-1.6
2,296,272	+		Ga0059261_2185	0.38	-0.9
2,296,272	+		Ga0059261_2185	0.38	-0.6
2,296,272	+		Ga0059261_2185	0.38	+0.2
2,296,272	+		Ga0059261_2185	0.38	+0.0
2,296,272	+		Ga0059261_2185	0.38	-1.2
2,296,272	+		Ga0059261_2185	0.38	-1.1
2,296,272	+		Ga0059261_2185	0.38	-1.2
2,296,272	+		Ga0059261_2185	0.38	+0.1
2,296,272	+		Ga0059261_2185	0.38	-0.2
2,296,272	+		Ga0059261_2185	0.38	-1.2
2,296,272	+		Ga0059261_2185	0.38	-0.7
2,296,272	+		Ga0059261_2185	0.38	-1.1
2,296,272	+		Ga0059261_2185	0.38	-1.0
2,296,272	+		Ga0059261_2185	0.38	+0.3
2,296,272	+		Ga0059261_2185	0.38	-1.5
2,296,273	-		Ga0059261_2185	0.38	-0.7
2,296,273	-				-1.2
2,296,273	-		Ga0059261_2185	0.38	-2.1
2,296,273	-		Ga0059261_2185	0.38	-0.3
2,296,273	-		Ga0059261_2185	0.38	+0.1
2,296,273	-		Ga0059261_2185	0.38	-1.0
2,296,273	-		Ga0059261_2185	0.38	-1.1
2,296,273	-		Ga0059261_2185	0.38	-0.7
2,296,273	-		Ga0059261_2185	0.38	-0.5
2,296,273	-		Ga0059261_2185	0.38	+0.1
2,296,273	-		Ga0059261_2185	0.38	-0.3
2,296,273	-		Ga0059261_2185	0.38	-1.8
2,296,273	-		Ga0059261_2185	0.38	-1.3
2,296,273	-		Ga0059261_2185	0.38	-0.8
2,296,273	-				+0.7
2,296,273	-		Ga0059261_2185	0.38	-1.0
2,296,273	-		Ga0059261_2185	0.38	+0.5
2,296,273	-		Ga0059261_2185	0.38	-1.1
2,296,273	-		Ga0059261_2185	0.38	+0.4
2,296,276	+		Ga0059261_2185	0.39	-0.8
2,296,276	+		Ga0059261_2185	0.39	-0.8
2,296,276	+		Ga0059261_2185	0.39	-0.4
2,296,276	+		Ga0059261_2185	0.39	-0.1
2,296,277	-		Ga0059261_2185	0.39	-0.9
2,296,277	-		Ga0059261_2185	0.39	-2.3
2,296,277	-		Ga0059261_2185	0.39	-0.9
2,296,277	-		Ga0059261_2185	0.39	-0.5
2,296,277	-		Ga0059261_2185	0.39	-1.6
2,296,277	-		Ga0059261_2185	0.39	-0.3
2,296,277	-		Ga0059261_2185	0.39	-0.8
2,296,277	-		Ga0059261_2185	0.39	+0.1
2,296,277	-		Ga0059261_2185	0.39	-1.6
2,296,277	-		Ga0059261_2185	0.39	-1.1
2,296,407	+		Ga0059261_2185	0.60	-0.8
2,296,407	+		Ga0059261_2185	0.60	-1.2
2,296,407	+		Ga0059261_2185	0.60	+0.4
2,296,407	+		Ga0059261_2185	0.60	-0.3
2,296,407	+		Ga0059261_2185	0.60	-0.3
2,296,549	+		Ga0059261_2185	0.84	-0.9
2,296,550	-		Ga0059261_2185	0.84	+0.1
2,296,642	+				-0.1
2,296,642	+				-0.5
2,296,642	+				-0.5
2,296,643	-				-0.6
2,296,643	-				-3.0
2,296,643	-				-0.1
2,296,643	-				+0.4
2,296,660	+				-0.1
2,296,660	+				+0.3
2,296,661	-				-0.1
2,296,661	-				+1.1
2,296,791	+		Ga0059261_2186	0.28	+0.5
2,296,792	-		Ga0059261_2186	0.28	-0.0
2,296,792	-		Ga0059261_2186	0.28	+0.1
2,296,905	+		Ga0059261_2186	0.51	-0.5
2,296,905	+		Ga0059261_2186	0.51	+0.3
2,296,905	+		Ga0059261_2186	0.51	-0.1
2,296,905	+		Ga0059261_2186	0.51	-0.9
2,296,905	+		Ga0059261_2186	0.51	+0.2
2,296,906	-		Ga0059261_2186	0.51	-0.2
2,296,906	-		Ga0059261_2186	0.51	+0.4
2,296,906	-		Ga0059261_2186	0.51	+0.9
2,296,906	-		Ga0059261_2186	0.51	-0.3
2,296,906	-		Ga0059261_2186	0.51	-0.9
2,297,081	+		Ga0059261_2186	0.87	+0.3
2,297,081	+		Ga0059261_2186	0.87	+0.9
2,297,082	-				+0.1
2,297,157	+				-1.4
2,297,158	-				-1.1
2,297,213	+				+0.1
2,297,213	+				-0.5
2,297,213	+				-0.9
2,297,214	-				-0.7
2,297,214	-				+0.4
2,297,285	+		Ga0059261_2187	0.12	-0.2
2,297,285	+		Ga0059261_2187	0.12	-0.6
2,297,285	+		Ga0059261_2187	0.12	+0.4
2,297,335	-		Ga0059261_2187	0.20	+0.1
2,297,531	+		Ga0059261_2187	0.49	+0.6
2,297,531	+		Ga0059261_2187	0.49	-0.9
2,297,531	+		Ga0059261_2187	0.49	+0.7
2,297,532	-		Ga0059261_2187	0.50	-0.2
2,297,532	-		Ga0059261_2187	0.50	-0.5
2,297,532	-		Ga0059261_2187	0.50	-0.2
2,297,532	-		Ga0059261_2187	0.50	-0.5
2,297,534	+		Ga0059261_2187	0.50	+0.3
2,297,534	+		Ga0059261_2187	0.50	-0.0
2,297,534	+		Ga0059261_2187	0.50	-0.5
2,297,534	+		Ga0059261_2187	0.50	+0.4
2,297,534	+		Ga0059261_2187	0.50	+0.2
2,297,534	+		Ga0059261_2187	0.50	-0.8
2,297,534	+		Ga0059261_2187	0.50	+0.2
2,297,534	+		Ga0059261_2187	0.50	+0.6
2,297,534	+		Ga0059261_2187	0.50	+0.1
2,297,534	+		Ga0059261_2187	0.50	+0.3
2,297,534	+		Ga0059261_2187	0.50	-2.2
2,297,534	+		Ga0059261_2187	0.50	+0.2
2,297,535	-		Ga0059261_2187	0.50	-0.0
2,297,535	-		Ga0059261_2187	0.50	+0.7
2,297,535	-		Ga0059261_2187	0.50	-1.7
2,297,535	-		Ga0059261_2187	0.50	+0.6
2,297,535	-		Ga0059261_2187	0.50	+0.1
2,297,535	-		Ga0059261_2187	0.50	+0.2
2,297,535	-		Ga0059261_2187	0.50	+0.0
2,297,535	-		Ga0059261_2187	0.50	-0.5
2,297,535	-		Ga0059261_2187	0.50	-0.5
2,297,616	-		Ga0059261_2187	0.62	+0.9