Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2083

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
2,180,884	+		Ga0059261_2082	0.54	+0.4
2,180,884	+		Ga0059261_2082	0.54	-0.4
2,180,884	+		Ga0059261_2082	0.54	+0.0
2,180,884	+		Ga0059261_2082	0.54	+0.7
2,180,884	+		Ga0059261_2082	0.54	+0.3
2,180,884	+		Ga0059261_2082	0.54	-0.5
2,180,885	-		Ga0059261_2082	0.54	-0.8
2,180,885	-		Ga0059261_2082	0.54	+0.2
2,180,885	-		Ga0059261_2082	0.54	-0.1
2,180,885	-		Ga0059261_2082	0.54	-0.3
2,181,145	+				+2.7
2,181,145	+		Ga0059261_2082	0.66	-0.1
2,181,145	+		Ga0059261_2082	0.66	+0.4
2,181,145	+		Ga0059261_2082	0.66	+0.6
2,181,145	+		Ga0059261_2082	0.66	+0.1
2,181,145	+		Ga0059261_2082	0.66	-0.4
2,181,145	+		Ga0059261_2082	0.66	+0.1
2,181,145	+		Ga0059261_2082	0.66	-0.5
2,181,145	+		Ga0059261_2082	0.66	+1.3
2,181,145	+		Ga0059261_2082	0.66	+0.7
2,181,145	+		Ga0059261_2082	0.66	+0.1
2,181,145	+		Ga0059261_2082	0.66	-0.5
2,181,146	-		Ga0059261_2082	0.66	+0.3
2,181,146	-		Ga0059261_2082	0.66	-0.1
2,181,146	-		Ga0059261_2082	0.66	+0.3
2,181,146	-		Ga0059261_2082	0.66	-0.1
2,181,146	-		Ga0059261_2082	0.66	+0.6
2,181,146	-		Ga0059261_2082	0.66	-0.1
2,181,146	-		Ga0059261_2082	0.66	+0.7
2,181,146	-		Ga0059261_2082	0.66	-0.5
2,181,146	-		Ga0059261_2082	0.66	-0.7
2,181,146	-		Ga0059261_2082	0.66	+0.2
2,181,286	+		Ga0059261_2082	0.73	+1.1
2,181,287	-				+1.7
2,181,287	-		Ga0059261_2082	0.73	+1.0
2,181,287	-		Ga0059261_2082	0.73	+0.8
2,181,287	-		Ga0059261_2082	0.73	+0.1
2,181,287	-		Ga0059261_2082	0.73	-0.1
2,181,502	+		Ga0059261_2082	0.83	-0.5
2,181,502	+		Ga0059261_2082	0.83	-0.2
2,181,502	+		Ga0059261_2082	0.83	+0.3
2,181,502	+		Ga0059261_2082	0.83	+0.5
2,181,502	+		Ga0059261_2082	0.83	-0.6
2,181,503	-		Ga0059261_2082	0.83	-0.2
2,181,503	-		Ga0059261_2082	0.83	-0.2
2,181,503	-		Ga0059261_2082	0.83	+0.5
2,181,503	-		Ga0059261_2082	0.83	-0.1
2,181,503	-		Ga0059261_2082	0.83	+0.1
2,181,861	+				-0.7
2,181,861	+				-0.2
2,181,862	-				+0.8
2,181,862	-				-0.0
2,181,862	-				-0.5
2,181,862	-				+0.5
2,181,862	-				+2.3
2,181,862	-				-0.4
2,181,886	+				-0.2
2,181,886	+				-0.8
2,181,886	+				+0.1
2,181,886	+				+0.3
2,181,886	+				-0.6
2,181,886	+				+0.8
2,181,886	+				+1.5
2,181,886	+				+0.5
2,181,886	+				+0.7
2,181,886	+				+0.2
2,181,886	+				+0.6
2,181,886	+				-0.2
2,181,886	+				-0.4
2,181,886	+				+0.2
2,181,886	+				-0.8
2,181,886	+				-0.3
2,181,886	+				+0.6
2,181,887	-				+1.1
2,181,887	-				+0.3
2,181,887	-				-1.1
2,181,887	-				-0.7
2,181,887	-				+1.2
2,181,887	-				+0.1
2,181,887	-				+0.4
2,181,887	-				-0.5
2,181,887	-				+0.3
2,181,887	-				-0.1
2,181,887	-				-1.2
2,181,887	-				-0.1
2,181,888	+				+0.3
2,181,888	+				+0.2
2,181,888	+				-0.4
2,181,888	+				+0.1
2,181,888	+				-0.3
2,181,888	+				+1.2
2,181,888	+				-0.3
2,181,888	+				-0.4
2,181,888	+				+0.8
2,181,888	+				+0.1
2,181,888	+				+0.5
2,181,888	+				+0.2
2,181,888	+				+0.4
2,181,888	+				+0.6
2,181,889	-				-0.5
2,181,889	-				+0.1
2,181,889	-				+0.1
2,181,889	-				+0.5
2,181,889	-				-1.3
2,181,889	-				+0.4
2,181,889	-				-0.1
2,182,007	-		Ga0059261_2083	0.16	+0.5
2,182,007	-		Ga0059261_2083	0.16	+0.2
2,182,149	+		Ga0059261_2083	0.31	+0.4
2,182,149	+		Ga0059261_2083	0.31	+0.4
2,182,149	+		Ga0059261_2083	0.31	+0.5
2,182,149	+		Ga0059261_2083	0.31	+0.1
2,182,149	+		Ga0059261_2083	0.31	+0.7
2,182,149	+		Ga0059261_2083	0.31	+0.2
2,182,149	+		Ga0059261_2083	0.31	+0.7
2,182,149	+		Ga0059261_2083	0.31	-0.2
2,182,149	+		Ga0059261_2083	0.31	-0.0
2,182,150	-		Ga0059261_2083	0.31	-0.0
2,182,150	-		Ga0059261_2083	0.31	-0.5
2,182,150	-		Ga0059261_2083	0.31	+0.1
2,182,150	-		Ga0059261_2083	0.31	+0.1
2,182,150	-		Ga0059261_2083	0.31	-0.4
2,182,150	-		Ga0059261_2083	0.31	+1.0
2,182,150	-				+1.5
2,182,150	-		Ga0059261_2083	0.31	-1.4
2,182,150	-		Ga0059261_2083	0.31	-0.5
2,182,150	-		Ga0059261_2083	0.31	+0.4
2,182,150	-		Ga0059261_2083	0.31	-0.1
2,182,150	-		Ga0059261_2083	0.31	+0.2
2,182,188	+		Ga0059261_2083	0.35	-1.9
2,182,188	+				+2.7
2,182,188	+		Ga0059261_2083	0.35	+0.5
2,182,189	-		Ga0059261_2083	0.36	+0.8
2,182,189	-		Ga0059261_2083	0.36	+1.1
2,182,189	-				+1.7
2,182,189	-		Ga0059261_2083	0.36	-0.2
2,182,189	-		Ga0059261_2083	0.36	+0.6
2,182,189	-		Ga0059261_2083	0.36	+0.6
2,182,189	-		Ga0059261_2083	0.36	+0.5
2,182,309	+		Ga0059261_2083	0.49	+0.5
2,182,309	+		Ga0059261_2083	0.49	+0.1
2,182,309	+		Ga0059261_2083	0.49	+0.3
2,182,309	+		Ga0059261_2083	0.49	+1.0
2,182,309	+		Ga0059261_2083	0.49	+1.2
2,182,310	-		Ga0059261_2083	0.49	+0.4
2,182,310	-		Ga0059261_2083	0.49	+0.3
2,182,311	+				+1.1
2,182,311	+		Ga0059261_2083	0.49	+0.6
2,182,311	+		Ga0059261_2083	0.49	+0.1
2,182,311	+		Ga0059261_2083	0.49	+0.2
2,182,311	+		Ga0059261_2083	0.49	-0.1
2,182,311	+		Ga0059261_2083	0.49	+0.4
2,182,311	+		Ga0059261_2083	0.49	+0.4
2,182,311	+		Ga0059261_2083	0.49	+1.4
2,182,311	+		Ga0059261_2083	0.49	-0.9
2,182,311	+		Ga0059261_2083	0.49	+0.3
2,182,311	+		Ga0059261_2083	0.49	+0.1
2,182,311	+		Ga0059261_2083	0.49	-0.2
2,182,311	+		Ga0059261_2083	0.49	+0.9
2,182,311	+		Ga0059261_2083	0.49	+0.1
2,182,312	-		Ga0059261_2083	0.49	+0.1
2,182,312	-		Ga0059261_2083	0.49	-0.5
2,182,312	-		Ga0059261_2083	0.49	+0.4
2,182,312	-		Ga0059261_2083	0.49	+0.8
2,182,312	-		Ga0059261_2083	0.49	-1.0
2,182,312	-		Ga0059261_2083	0.49	-0.6
2,182,312	-		Ga0059261_2083	0.49	-0.5
2,182,312	-				+1.1
2,182,312	-		Ga0059261_2083	0.49	-0.2
2,182,529	+		Ga0059261_2083	0.72	-0.4
2,182,566	+		Ga0059261_2083	0.76	+1.0
2,182,567	-		Ga0059261_2083	0.77	+0.3
2,182,567	-		Ga0059261_2083	0.77	+1.0
2,182,644	+		Ga0059261_2083	0.85	-0.6
2,182,644	+		Ga0059261_2083	0.85	-0.9
2,182,644	+		Ga0059261_2083	0.85	+0.3
2,182,644	+		Ga0059261_2083	0.85	-0.2
2,182,644	+		Ga0059261_2083	0.85	+1.1
2,182,644	+		Ga0059261_2083	0.85	+0.4
2,182,644	+		Ga0059261_2083	0.85	+0.2
2,182,645	-		Ga0059261_2083	0.85	-0.1
2,182,645	-		Ga0059261_2083	0.85	+0.9
2,182,645	-		Ga0059261_2083	0.85	-1.1
2,182,645	-		Ga0059261_2083	0.85	-0.7
2,182,645	-		Ga0059261_2083	0.85	+0.1
2,182,838	+				+1.7
2,182,838	+				-0.1
2,182,838	+				+0.7
2,182,838	+				+1.0
2,182,838	+				+1.6
2,182,838	+				-0.3
2,182,838	+				-0.1
2,182,838	+				+1.4
2,182,838	+				-0.1
2,182,839	-				-0.1
2,182,843	+				+0.5
2,182,843	+				+0.1
2,182,844	-				-1.2
2,182,844	-				+0.1
2,182,933	+				-0.6
2,183,002	+		Ga0059261_2084	0.31	-0.3
2,183,002	+		Ga0059261_2084	0.31	-1.2
2,183,002	+		Ga0059261_2084	0.31	+1.1
2,183,002	+		Ga0059261_2084	0.31	-0.2
2,183,002	+		Ga0059261_2084	0.31	-0.8
2,183,002	+		Ga0059261_2084	0.31	+0.3
2,183,003	-		Ga0059261_2084	0.31	+1.0
2,183,003	-		Ga0059261_2084	0.31	+0.1
2,183,003	-		Ga0059261_2084	0.31	+0.3
2,183,003	-		Ga0059261_2084	0.31	-0.2
2,183,003	-		Ga0059261_2084	0.31	-0.7
2,183,510	+				+0.0
2,183,510	+				+1.1
2,183,510	+				+0.1
2,183,510	+				-0.0
2,183,523	+				+0.2
2,183,523	+				+0.5
2,183,523	+				-0.0
2,183,523	+				-1.3
2,183,523	+				+0.4
2,183,523	+				+0.1
2,183,524	-				-1.1
2,183,524	-				+1.1
2,183,524	-				-0.3
2,183,524	-				+0.0
2,183,524	-				-0.2
2,183,524	-				+0.5
2,183,524	-				+0.2
2,183,524	-				-0.2
2,183,524	-				+0.3
2,183,524	-				-0.1
2,183,554	+				+0.3
2,183,554	+				+1.2
2,183,732	+		Ga0059261_2086	0.32	+0.5