Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1300

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
1,366,236	+		Ga0059261_1299	0.41	+0.3
1,366,236	+		Ga0059261_1299	0.41	+0.5
1,366,319	+		Ga0059261_1299	0.47	-1.0
1,366,319	+				+1.0
1,366,320	-		Ga0059261_1299	0.47	+0.1
1,366,320	-		Ga0059261_1299	0.47	+0.1
1,366,322	+		Ga0059261_1299	0.47	+0.0
1,366,322	+		Ga0059261_1299	0.47	-0.7
1,366,322	+		Ga0059261_1299	0.47	+0.5
1,366,323	-		Ga0059261_1299	0.47	+0.3
1,366,323	-		Ga0059261_1299	0.47	-1.3
1,366,355	+		Ga0059261_1299	0.49	+0.6
1,366,356	-		Ga0059261_1299	0.49	-0.1
1,366,398	+		Ga0059261_1299	0.52	-0.1
1,366,398	+		Ga0059261_1299	0.52	-0.3
1,366,398	+		Ga0059261_1299	0.52	+0.2
1,366,399	-		Ga0059261_1299	0.52	+0.1
1,366,399	-		Ga0059261_1299	0.52	+0.5
1,366,470	+		Ga0059261_1299	0.57	-0.1
1,366,520	-		Ga0059261_1299	0.61	-0.0
1,366,520	-		Ga0059261_1299	0.61	+1.1
1,366,764	+		Ga0059261_1299	0.78	+0.7
1,366,765	-		Ga0059261_1299	0.78	+0.2
1,366,765	-		Ga0059261_1299	0.78	-0.0
1,366,765	-		Ga0059261_1299	0.78	-0.3
1,366,765	-		Ga0059261_1299	0.78	+0.1
1,366,765	-		Ga0059261_1299	0.78	-0.2
1,366,962	+				+0.1
1,366,963	-				-0.2
1,366,963	-				+1.4
1,367,004	+				-0.6
1,367,004	+				+0.2
1,367,005	-				+0.0
1,367,005	-				+0.5
1,367,062	+				+0.2
1,367,063	-				-0.2
1,367,142	-				+1.0
1,367,164	+				-1.2
1,367,164	+				-0.3
1,367,165	-				+0.2
1,367,187	+		Ga0059261_1300	0.12	-0.4
1,367,187	+		Ga0059261_1300	0.12	+0.6
1,367,187	+		Ga0059261_1300	0.12	+0.7
1,367,256	-		Ga0059261_1300	0.34	-0.8
1,367,288	+		Ga0059261_1300	0.44	+0.5
1,367,288	+		Ga0059261_1300	0.44	+0.8
1,367,289	-		Ga0059261_1300	0.44	+0.2
1,367,305	+		Ga0059261_1300	0.49	+0.1
1,367,466	-				+0.9
1,367,535	+				+0.6
1,367,585	+				+1.0
1,367,614	-				-0.5
1,367,614	-				-0.6
1,367,619	-				+1.0
1,367,620	+				+0.8
1,367,620	+				-0.4
1,367,620	+				+0.7
1,367,621	-				-0.3
1,367,623	+				-0.5
1,367,623	+				-0.6
1,367,947	+				-1.3
1,367,947	+		Ga0059261_1301	0.37	-0.0
1,367,947	+		Ga0059261_1301	0.37	-2.8
1,367,948	-		Ga0059261_1301	0.37	-1.0
1,368,080	+		Ga0059261_1301	0.55	-1.6
1,368,115	+				-0.0
1,368,115	+		Ga0059261_1301	0.60	-1.7
1,368,115	+				-1.3
1,368,115	+		Ga0059261_1301	0.60	-2.8
1,368,115	+		Ga0059261_1301	0.60	-2.0
1,368,116	-		Ga0059261_1301	0.60	-2.7
1,368,116	-		Ga0059261_1301	0.60	-3.2
1,368,355	+				-0.6
1,368,355	+				-1.6
1,368,356	-				-3.4
1,368,356	-				-2.5
1,368,356	-				-2.6
1,368,356	-				-1.0
1,368,356	-				-2.0
1,368,394	+				-1.6
1,368,410	+				-0.3
1,368,410	+				-2.5
1,368,410	+				-1.1
1,368,410	+				-1.0
1,368,411	-				-1.6
1,368,411	-				-0.8
1,368,418	+				-0.9
1,368,418	+				+1.0