Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1196

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
1,239,149	-				+0.5
1,239,244	+		Ga0059261_1195	0.16	+0.2
1,239,310	+		Ga0059261_1195	0.26	-0.4
1,239,424	+		Ga0059261_1195	0.44	+0.4
1,239,466	+		Ga0059261_1195	0.50	+0.5
1,239,602	+		Ga0059261_1195	0.71	+1.0
1,239,602	+		Ga0059261_1195	0.71	-0.2
1,239,603	-				+0.4
1,239,603	-		Ga0059261_1195	0.71	+0.3
1,239,603	-		Ga0059261_1195	0.71	-0.7
1,239,603	-		Ga0059261_1195	0.71	-0.9
1,239,603	-		Ga0059261_1195	0.71	-0.5
1,239,603	-		Ga0059261_1195	0.71	+1.5
1,239,801	-				-1.0
1,239,828	+				+0.6
1,239,828	+				+1.0
1,239,828	+				+0.3
1,239,828	+				+1.0
1,239,828	+				-0.8
1,239,828	+				+0.6
1,239,828	+				+0.3
1,239,828	+				-0.7
1,239,828	+				+1.0
1,239,828	+				-1.0
1,239,828	+				+0.3
1,239,828	+				-0.0
1,239,828	+				-0.2
1,239,828	+				-1.0
1,239,828	+				-0.5
1,239,828	+				+0.2
1,239,828	+				+0.5
1,239,829	-				+0.5
1,239,829	-				+0.1
1,239,829	-				+0.5
1,239,829	-				-1.1
1,239,829	-				-0.4
1,239,829	-				-0.6
1,239,829	-				-1.4
1,239,831	-				-0.1
1,239,831	-				+0.7
1,239,841	+				-0.3
1,239,844	+				+0.0
1,239,923	+				-0.7
1,239,923	+				+0.1
1,239,923	+				-0.7
1,239,923	+				+0.6
1,239,924	-				-0.6
1,239,924	-				-0.3
1,239,924	-				-0.2
1,239,924	-				+0.2
1,239,924	-				-0.1
1,239,924	-				-0.2
1,239,924	-				-1.0
1,239,926	+				+0.3
1,239,926	+				+0.4
1,239,927	-				-0.9
1,239,927	-				+0.3
1,239,927	-				-0.7
1,239,927	-				-0.5
1,239,927	-				-0.1
1,239,927	-				+0.8
1,239,974	+				-0.1
1,239,974	+				-1.1
1,239,975	-				+0.5
1,239,983	+				+0.4
1,239,984	-				-0.9
1,240,213	+		Ga0059261_1196	0.71	+0.2
1,240,213	+		Ga0059261_1196	0.71	+0.6
1,240,214	-		Ga0059261_1196	0.71	+0.5
1,240,214	-				+1.5
1,240,214	-		Ga0059261_1196	0.71	-0.1
1,240,214	-		Ga0059261_1196	0.71	+0.0
1,240,262	+				-0.3
1,240,273	+				-1.5
1,240,273	+				+0.0
1,240,273	+				+0.3
1,240,273	+				-1.1
1,240,273	+				+0.4
1,240,273	+				-0.6
1,240,273	+				+0.3
1,240,274	-				-0.3
1,240,274	-				-0.2
1,240,274	-				+0.1
1,240,327	+				+0.2
1,240,327	+				+1.1
1,240,327	+				-0.4
1,240,327	+				-0.8
1,240,328	-				+0.4
1,240,328	-				-0.4
1,240,328	-				+1.7
1,240,328	-				+1.2
1,240,328	-				+0.5
1,240,328	-				+0.6
1,240,368	+		Ga0059261_1197	0.13	+0.2
1,240,368	+		Ga0059261_1197	0.13	-0.0
1,240,368	+		Ga0059261_1197	0.13	-0.5
1,240,368	+		Ga0059261_1197	0.13	-0.3
1,240,368	+		Ga0059261_1197	0.13	-2.4
1,240,368	+		Ga0059261_1197	0.13	+0.6
1,240,369	-		Ga0059261_1197	0.13	-0.4
1,240,401	+		Ga0059261_1197	0.23	-0.6
1,240,401	+		Ga0059261_1197	0.23	+0.6
1,240,402	-		Ga0059261_1197	0.23	+0.7
1,240,402	-		Ga0059261_1197	0.23	+0.0
1,240,695	-				-0.6
1,240,738	+				+1.5
1,240,739	-				-0.0
1,240,739	-				-0.1
1,240,739	-				-0.2
1,240,739	-				-0.1
1,240,739	-				-0.6
1,240,839	+				-0.3
1,240,839	+				+0.4
1,240,839	+				-0.5
1,240,839	+				+0.3
1,240,840	-				-1.4
1,240,907	+				+0.1
1,240,907	+				-0.2
1,240,907	+				-1.1
1,240,907	+				+0.2
1,240,908	-				+0.5
1,240,908	-				+0.8
1,240,908	-				+0.6
1,240,908	-				-0.0
1,240,908	-				-0.6
1,240,933	+				+0.2
1,240,933	+				-0.3
1,240,933	+				-0.2
1,240,933	+				-0.2
1,240,934	-				-0.2
1,241,029	+				+0.0
1,241,029	+				-0.0
1,241,030	-				+0.3
1,241,030	-				-0.4
1,241,030	-				+0.4
1,241,034	+				+0.8
1,241,034	+				-2.3
1,241,034	+				-0.0
1,241,034	+				+0.1
1,241,034	+				-0.4
1,241,035	-				+1.0
1,241,035	-				-0.6
1,241,035	-				-1.6
1,241,035	-				-1.4
1,241,071	+				-0.2
1,241,071	+				-0.3
1,241,071	+				+0.5
1,241,071	+				-0.9
1,241,071	+				+1.0
1,241,071	+				-0.2
1,241,072	-				-0.3
1,241,072	-				+0.4
1,241,203	+				+0.2
1,241,203	+				-0.0
1,241,203	+				+0.4
1,241,203	+				+0.1
1,241,203	+				+0.3
1,241,204	-				-0.1
1,241,204	-				+0.7
1,241,204	-				+0.1
1,241,204	-				-0.3
1,241,204	-				-1.2
1,241,227	-				+1.0
1,241,227	-				+0.8
1,241,228	+				+0.2
1,241,228	+				-0.0
1,241,228	+				+0.5
1,241,228	+				+0.5
1,241,228	+				-0.2
1,241,229	-				-0.3
1,241,229	-				+0.1
1,241,229	-				-0.3
1,241,229	-				-0.2
1,241,229	-				+0.2
1,241,229	-				+0.6
1,241,229	-				-0.2
1,241,229	-				-0.4
1,241,236	+				+0.4
1,241,236	+				-0.0
1,241,236	+				-1.0
1,241,236	+				-0.6
1,241,237	-				-2.0
1,241,237	-				+0.5
1,241,237	-				+0.4
1,241,237	-				+0.1
1,241,237	-				-0.1
1,241,237	-				-0.2
1,241,237	-				-1.4
1,241,265	+				-0.0
1,241,265	+				-0.0
1,241,265	+				+0.4
1,241,265	+				-0.2
1,241,265	+				-0.3
1,241,265	+				-0.3
1,241,265	+				-1.0
1,241,265	+				+0.2
1,241,266	-				-0.8
1,241,266	-				+0.4
1,241,266	-				+0.1
1,241,266	-				+0.8
1,241,266	-				+0.1
1,241,266	-				+0.1
1,241,266	-				-0.8
1,241,266	-				-0.4
1,241,266	-				-2.2
1,241,266	-				-0.0