Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1014

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
1,050,606	+				+1.0
1,050,607	-				+0.4
1,050,607	-				+0.2
1,050,607	-				+0.0
1,050,607	-				+0.4
1,050,624	+				+0.6
1,050,681	+		Ga0059261_1013	0.10	-0.0
1,050,681	+		Ga0059261_1013	0.10	-1.4
1,050,681	+		Ga0059261_1013	0.10	+0.2
1,050,681	+		Ga0059261_1013	0.10	-1.4
1,050,681	+		Ga0059261_1013	0.10	-0.2
1,050,682	-		Ga0059261_1013	0.10	-1.1
1,050,682	-		Ga0059261_1013	0.10	-0.2
1,050,682	-		Ga0059261_1013	0.10	-0.3
1,050,682	-		Ga0059261_1013	0.10	-0.2
1,050,682	-		Ga0059261_1013	0.10	+0.4
1,050,682	-		Ga0059261_1013	0.10	-0.4
1,050,682	-		Ga0059261_1013	0.10	-1.4
1,050,682	-		Ga0059261_1013	0.10	+0.2
1,050,682	-		Ga0059261_1013	0.10	-0.5
1,050,682	-		Ga0059261_1013	0.10	-0.2
1,050,711	+		Ga0059261_1013	0.14	+0.7
1,050,711	+				+1.0
1,050,712	-		Ga0059261_1013	0.14	-0.2
1,050,712	-		Ga0059261_1013	0.14	+0.3
1,050,712	-		Ga0059261_1013	0.14	-1.9
1,050,712	-		Ga0059261_1013	0.14	-0.7
1,050,712	-		Ga0059261_1013	0.14	+1.2
1,050,757	+		Ga0059261_1013	0.20	-0.2
1,050,757	+		Ga0059261_1013	0.20	-0.5
1,050,757	+		Ga0059261_1013	0.20	+0.6
1,050,758	-		Ga0059261_1013	0.20	+0.1
1,050,758	-		Ga0059261_1013	0.20	+0.5
1,050,774	+		Ga0059261_1013	0.22	+0.3
1,050,774	+		Ga0059261_1013	0.22	-0.5
1,050,775	-		Ga0059261_1013	0.23	+0.1
1,050,775	-		Ga0059261_1013	0.23	-0.0
1,050,775	-		Ga0059261_1013	0.23	-0.4
1,050,775	-		Ga0059261_1013	0.23	+0.1
1,050,775	-		Ga0059261_1013	0.23	+0.7
1,050,775	-		Ga0059261_1013	0.23	+0.7
1,050,775	-		Ga0059261_1013	0.23	+0.7
1,051,003	-		Ga0059261_1013	0.53	-0.1
1,051,003	-		Ga0059261_1013	0.53	-0.1
1,051,003	-		Ga0059261_1013	0.53	+0.6
1,051,006	-		Ga0059261_1013	0.53	+1.6
1,051,006	-		Ga0059261_1013	0.53	+0.7
1,051,006	-		Ga0059261_1013	0.53	+0.1
1,051,006	-		Ga0059261_1013	0.53	+1.4
1,051,006	-		Ga0059261_1013	0.53	+0.7
1,051,080	+		Ga0059261_1013	0.63	+1.0
1,051,080	+				-1.0
1,051,081	-		Ga0059261_1013	0.63	-0.8
1,051,081	-		Ga0059261_1013	0.63	+1.1
1,051,197	+		Ga0059261_1013	0.79	-0.9
1,051,198	-		Ga0059261_1013	0.79	-0.0
1,051,240	-		Ga0059261_1013	0.84	+0.1
1,051,240	-		Ga0059261_1013	0.84	-0.1
1,051,242	+		Ga0059261_1013	0.85	-0.4
1,051,242	+		Ga0059261_1013	0.85	+0.6
1,051,243	-		Ga0059261_1013	0.85	-0.4
1,051,243	-		Ga0059261_1013	0.85	-0.6
1,051,249	-		Ga0059261_1013	0.86	+0.5
1,051,296	+				+0.3
1,051,296	+				+0.6
1,051,296	+				+0.2
1,051,296	+				-0.8
1,051,296	+				+0.2
1,051,296	+				-0.0
1,051,296	+				-0.2
1,051,297	-				-0.1
1,051,297	-				+0.2
1,051,297	-				-0.3
1,051,297	-				+0.5
1,051,297	-				+0.2
1,051,297	-				+1.6
1,051,297	-				-0.9
1,051,321	+				+1.0
1,051,321	+				-0.2
1,051,322	-				+0.0
1,051,346	+				+0.3
1,051,502	+				-0.3
1,051,502	+				-0.1
1,051,502	+				+0.6
1,051,502	+				-0.0
1,051,502	+				-0.9
1,051,503	-				+0.6
1,051,503	-				+0.7
1,051,503	-				+2.8
1,051,526	+				+0.7
1,051,527	-				+0.1
1,051,794	+		Ga0059261_1014	0.26	+0.4
1,051,794	+		Ga0059261_1014	0.26	-0.1
1,051,795	-		Ga0059261_1014	0.26	+0.6
1,052,000	+		Ga0059261_1014	0.47	-0.0
1,052,019	+		Ga0059261_1014	0.48	-0.0
1,052,019	+		Ga0059261_1014	0.48	+0.2
1,052,019	+		Ga0059261_1014	0.48	-1.0
1,052,020	-		Ga0059261_1014	0.49	+0.2
1,052,020	-		Ga0059261_1014	0.49	+0.1
1,052,048	-		Ga0059261_1014	0.51	+0.3
1,052,356	+		Ga0059261_1014	0.83	-0.2
1,052,356	+		Ga0059261_1014	0.83	+1.0
1,052,356	+		Ga0059261_1014	0.83	+0.4
1,052,356	+		Ga0059261_1014	0.83	+0.2
1,052,356	+		Ga0059261_1014	0.83	-0.4
1,052,357	-		Ga0059261_1014	0.83	+0.6
1,052,357	-		Ga0059261_1014	0.83	+0.6
1,052,630	-		Ga0059261_1015	0.17	+0.5
1,052,743	+		Ga0059261_1015	0.34	+0.2
1,052,743	+		Ga0059261_1015	0.34	+0.6
1,052,743	+		Ga0059261_1015	0.34	+1.2
1,052,743	+		Ga0059261_1015	0.34	-1.5
1,052,744	-		Ga0059261_1015	0.34	-0.1
1,052,744	-		Ga0059261_1015	0.34	-0.8
1,052,744	-		Ga0059261_1015	0.34	-0.2
1,053,027	+		Ga0059261_1015	0.77	+0.1
1,053,029	+		Ga0059261_1015	0.77	-0.1
1,053,072	-		Ga0059261_1015	0.83	-0.3
1,053,079	+		Ga0059261_1015	0.85	-0.1
1,053,079	+				+1.0
1,053,080	-		Ga0059261_1015	0.85	-0.4
1,053,421	+		Ga0059261_1016	0.81	+0.4
1,053,421	+		Ga0059261_1016	0.81	-0.5
1,053,422	-		Ga0059261_1016	0.81	+0.6
1,053,422	-		Ga0059261_1016	0.81	-0.0