Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1001

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
1,036,785	+		Ga0059261_0998	0.69	-0.4
1,036,785	+		Ga0059261_0998	0.69	+0.0
1,036,794	+		Ga0059261_0998	0.70	+0.3
1,037,074	+				+1.0
1,037,074	+				+0.7
1,037,074	+				+0.3
1,037,074	+				+0.4
1,037,074	+				-0.4
1,037,075	-				+0.5
1,037,075	-				-0.3
1,037,075	-				+0.6
1,037,159	-				-0.1
1,037,159	-				+0.2
1,037,163	+				-1.0
1,037,163	+				+0.5
1,037,163	+				-0.1
1,037,163	+				+1.6
1,037,164	-				+1.3
1,037,164	-				-0.4
1,037,164	-				-0.6
1,037,164	-				-0.2
1,037,174	+				-0.0
1,037,174	+				+2.0
1,037,174	+				+0.9
1,037,175	-				+0.4
1,037,175	-				-0.1
1,037,176	+				-0.8
1,037,409	+				-0.3
1,037,409	+				-0.3
1,037,409	+				-0.4
1,037,409	+				-0.1
1,037,426	+				-0.6
1,037,426	+				+0.0
1,037,427	-				-0.1
1,037,427	-				+0.7
1,037,427	-				+1.2
1,037,552	-				-0.6
1,037,563	+				-0.6
1,037,633	+				-2.3
1,037,745	-				-1.8
1,037,745	-				+1.0
1,037,915	+		Ga0059261_1001	0.15	-4.5
1,037,915	+		Ga0059261_1001	0.15	-4.1
1,037,916	-		Ga0059261_1001	0.15	-1.4
1,037,916	-		Ga0059261_1001	0.15	-2.5
1,037,916	-		Ga0059261_1001	0.15	-2.0
1,037,924	+		Ga0059261_1001	0.16	-3.0
1,037,925	-				-1.0
1,038,215	+		Ga0059261_1001	0.28	-0.6
1,038,215	+		Ga0059261_1001	0.28	-1.5
1,038,216	-		Ga0059261_1001	0.28	-2.6
1,038,216	-		Ga0059261_1001	0.28	-1.6
1,038,216	-		Ga0059261_1001	0.28	-0.9
1,038,216	-		Ga0059261_1001	0.28	-1.6
1,038,216	-		Ga0059261_1001	0.28	+0.4
1,038,216	-		Ga0059261_1001	0.28	-2.9
1,038,220	-		Ga0059261_1001	0.28	-1.4
1,038,220	-		Ga0059261_1001	0.28	-2.2
1,038,318	-				-0.0
1,038,446	-		Ga0059261_1001	0.38	-3.4
1,038,446	-		Ga0059261_1001	0.38	-3.1
1,038,446	-		Ga0059261_1001	0.38	-3.1
1,038,551	+		Ga0059261_1001	0.43	-1.4
1,038,551	+		Ga0059261_1001	0.43	-3.7
1,038,551	+		Ga0059261_1001	0.43	-2.7
1,038,551	+		Ga0059261_1001	0.43	-3.0
1,038,552	-		Ga0059261_1001	0.43	-0.0
1,038,698	+		Ga0059261_1001	0.49	-3.8
1,038,698	+		Ga0059261_1001	0.49	-2.0
1,038,743	+		Ga0059261_1001	0.51	-2.2
1,038,743	+		Ga0059261_1001	0.51	-2.4
1,038,744	-		Ga0059261_1001	0.51	-1.8
1,039,052	+		Ga0059261_1001	0.64	-0.6
1,039,053	-		Ga0059261_1001	0.64	-1.9
1,039,053	-		Ga0059261_1001	0.64	-0.7
1,039,053	-		Ga0059261_1001	0.64	-1.4
1,039,053	-		Ga0059261_1001	0.64	-1.0
1,039,053	-		Ga0059261_1001	0.64	-1.4
1,039,152	-		Ga0059261_1001	0.69	-3.6
1,039,152	-				-1.4
1,039,152	-		Ga0059261_1001	0.69	-3.6
1,039,152	-		Ga0059261_1001	0.69	-2.5
1,039,153	+		Ga0059261_1001	0.69	-3.4
1,039,153	+		Ga0059261_1001	0.69	-2.0
1,039,153	+		Ga0059261_1001	0.69	-3.5
1,039,154	-		Ga0059261_1001	0.69	-1.3
1,039,154	-		Ga0059261_1001	0.69	-2.4
1,039,155	-		Ga0059261_1001	0.69	-2.2
1,039,200	-		Ga0059261_1001	0.71	-1.4
1,039,536	-		Ga0059261_1001	0.85	-1.9
1,039,664	+				-2.6
1,039,664	+				-1.4
1,039,664	+				-2.4
1,039,676	+				-0.6
1,039,676	+				-3.3
1,039,677	-				-3.0
1,039,677	-				-1.2
1,039,881	-				+1.6
1,039,990	+				-0.0
1,039,990	+				+1.0
1,039,990	+				-0.1
1,039,990	+				-0.3
1,039,990	+				-0.6
1,040,041	+				-1.7
1,040,042	-				+0.6
1,040,054	+				-0.4
1,040,054	+				+0.4
1,040,054	+				+0.9
1,040,055	-				+0.2
1,040,055	-				-0.5
1,040,055	-				-0.8
1,040,055	-				+0.4
1,040,055	-				+0.8
1,040,065	+				-0.1
1,040,065	+				+1.4
1,040,065	+				+0.5
1,040,065	+				-1.4
1,040,065	+				+0.3
1,040,066	-				+0.3
1,040,066	-				-1.0
1,040,066	-				+0.8
1,040,072	-				-0.0
1,040,072	-				-0.0
1,040,095	+				-0.8
1,040,095	+				-0.1
1,040,095	+				+1.3
1,040,096	-				+0.3
1,040,336	-		Ga0059261_1002	0.14	+0.3
1,040,336	-		Ga0059261_1002	0.14	-0.5
1,040,336	-		Ga0059261_1002	0.14	+0.3
1,040,365	+		Ga0059261_1002	0.15	+0.9
1,040,365	+		Ga0059261_1002	0.15	-1.2
1,040,365	+		Ga0059261_1002	0.15	+0.3
1,040,365	+		Ga0059261_1002	0.15	+0.2
1,040,366	-		Ga0059261_1002	0.15	+0.4
1,040,522	-		Ga0059261_1002	0.24	+0.1
1,040,535	+		Ga0059261_1002	0.25	-0.5
1,040,536	-		Ga0059261_1002	0.25	+0.7
1,040,665	+		Ga0059261_1002	0.33	+0.2
1,040,665	+		Ga0059261_1002	0.33	+0.1
1,040,665	+		Ga0059261_1002	0.33	-0.0
1,040,665	+		Ga0059261_1002	0.33	+0.7
1,040,666	-		Ga0059261_1002	0.33	+1.7
1,040,666	-		Ga0059261_1002	0.33	+0.1
1,040,666	-		Ga0059261_1002	0.33	+1.0
1,040,666	-		Ga0059261_1002	0.33	-0.1
1,040,704	+		Ga0059261_1002	0.35	+0.3
1,040,707	-		Ga0059261_1002	0.35	-1.4
1,040,707	-		Ga0059261_1002	0.35	-1.0
1,040,707	-		Ga0059261_1002	0.35	-0.9
1,040,707	-		Ga0059261_1002	0.35	+0.2
1,040,752	+		Ga0059261_1002	0.38	-1.4
1,040,752	+		Ga0059261_1002	0.38	+0.5
1,040,752	+		Ga0059261_1002	0.38	-2.5
1,040,753	-		Ga0059261_1002	0.38	-1.0
1,040,753	-		Ga0059261_1002	0.38	-0.3
1,040,783	-		Ga0059261_1002	0.40	-1.4
1,040,783	-		Ga0059261_1002	0.40	+0.5
1,040,783	-		Ga0059261_1002	0.40	+0.1
1,040,783	-		Ga0059261_1002	0.40	-0.6
1,040,783	-		Ga0059261_1002	0.40	+0.4
1,040,835	+		Ga0059261_1002	0.43	+0.4
1,040,836	-		Ga0059261_1002	0.43	-0.2
1,040,857	+		Ga0059261_1002	0.44	-0.2
1,040,857	+		Ga0059261_1002	0.44	+0.4
1,040,857	+		Ga0059261_1002	0.44	-0.8
1,040,857	+		Ga0059261_1002	0.44	+1.2
1,040,857	+				+1.4
1,040,857	+		Ga0059261_1002	0.44	-0.8
1,040,857	+		Ga0059261_1002	0.44	+1.2
1,040,857	+		Ga0059261_1002	0.44	-2.0
1,040,857	+		Ga0059261_1002	0.44	+0.3
1,040,857	+		Ga0059261_1002	0.44	-0.0
1,040,857	+		Ga0059261_1002	0.44	-0.0
1,040,858	-		Ga0059261_1002	0.44	+0.0
1,040,858	-		Ga0059261_1002	0.44	-0.0
1,040,858	-		Ga0059261_1002	0.44	+0.0
1,040,858	-		Ga0059261_1002	0.44	+0.4
1,040,858	-		Ga0059261_1002	0.44	-0.3
1,040,858	-		Ga0059261_1002	0.44	-0.3