Experiment: Rifampicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0719 and Ga0059261_0720 are separated by 58 nucleotides Ga0059261_0720 and Ga0059261_0721 are separated by 19 nucleotides Ga0059261_0721 and Ga0059261_0722 are separated by 99 nucleotides
Ga0059261_0719: Ga0059261_0719 - Uncharacterized protein conserved in bacteria, at 752,765 to 753,802
_0719
Ga0059261_0720: Ga0059261_0720 - Predicted small integral membrane protein, at 753,861 to 754,268
_0720
Ga0059261_0721: Ga0059261_0721 - thiamine-phosphate diphosphorylase, at 754,288 to 754,977
_0721
Ga0059261_0722: Ga0059261_0722 - L-aminopeptidase/D-esterase, at 755,077 to 756,216
_0722
Position (kb) 754
755 Strain fitness (log2 ratio) -2
-1
0
1 at 753.308 kb on - strand, within Ga0059261_0719 at 753.577 kb on + strand, within Ga0059261_0719 at 753.650 kb on - strand, within Ga0059261_0719 at 753.668 kb on - strand, within Ga0059261_0719 at 753.668 kb on - strand, within Ga0059261_0719 at 753.995 kb on + strand, within Ga0059261_0720 at 753.995 kb on + strand, within Ga0059261_0720 at 753.996 kb on - strand, within Ga0059261_0720 at 753.996 kb on - strand, within Ga0059261_0720 at 754.144 kb on + strand, within Ga0059261_0720 at 754.242 kb on + strand at 754.256 kb on + strand at 754.256 kb on + strand at 754.256 kb on + strand at 754.256 kb on + strand at 754.256 kb on + strand at 754.257 kb on - strand at 754.257 kb on - strand at 754.257 kb on - strand at 754.257 kb on - strand at 754.289 kb on + strand at 754.289 kb on + strand at 754.986 kb on + strand at 754.986 kb on + strand at 754.986 kb on + strand at 754.987 kb on - strand at 754.987 kb on - strand at 754.987 kb on - strand at 754.987 kb on - strand at 754.987 kb on - strand at 754.988 kb on + strand at 754.988 kb on + strand at 754.989 kb on - strand at 754.989 kb on - strand at 754.989 kb on - strand at 755.268 kb on + strand, within Ga0059261_0722 at 755.341 kb on + strand, within Ga0059261_0722 at 755.342 kb on - strand, within Ga0059261_0722 at 755.510 kb on + strand, within Ga0059261_0722 at 755.510 kb on + strand, within Ga0059261_0722 at 755.511 kb on - strand, within Ga0059261_0722 at 755.511 kb on - strand, within Ga0059261_0722 at 755.743 kb on + strand, within Ga0059261_0722 at 755.743 kb on + strand, within Ga0059261_0722 at 755.743 kb on + strand, within Ga0059261_0722 at 755.743 kb on + strand, within Ga0059261_0722 at 755.743 kb on + strand, within Ga0059261_0722 at 755.744 kb on - strand, within Ga0059261_0722 at 755.744 kb on - strand, within Ga0059261_0722 at 755.744 kb on - strand, within Ga0059261_0722 at 755.744 kb on - strand, within Ga0059261_0722 at 755.744 kb on - strand, within Ga0059261_0722 at 755.798 kb on - strand, within Ga0059261_0722 at 755.962 kb on + strand, within Ga0059261_0722 at 755.963 kb on - strand, within Ga0059261_0722
Per-strain Table
Position Strand Gene LocusTag Fraction Rifampicin 0.001 mg/ml remove 753,308 - Ga0059261_0719 0.52 -0.7 753,577 + Ga0059261_0719 0.78 -0.7 753,650 - Ga0059261_0719 0.85 -0.9 753,668 - Ga0059261_0719 0.87 -0.9 753,668 - Ga0059261_0719 0.87 -0.4 753,995 + Ga0059261_0720 0.33 +0.2 753,995 + Ga0059261_0720 0.33 +1.1 753,996 - Ga0059261_0720 0.33 -0.5 753,996 - Ga0059261_0720 0.33 +0.5 754,144 + Ga0059261_0720 0.69 +0.1 754,242 + +0.4 754,256 + -0.7 754,256 + +0.6 754,256 + +0.0 754,256 + -0.1 754,256 + -0.4 754,257 - -0.4 754,257 - -0.0 754,257 - -0.1 754,257 - -0.8 754,289 + +0.4 754,289 + +0.9 754,986 + +0.6 754,986 + -1.1 754,986 + -1.8 754,987 - -0.6 754,987 - +0.1 754,987 - +0.3 754,987 - -0.1 754,987 - -0.1 754,988 + -0.4 754,988 + -2.2 754,989 - -0.2 754,989 - -0.4 754,989 - +0.4 755,268 + Ga0059261_0722 0.17 -0.8 755,341 + Ga0059261_0722 0.23 +0.1 755,342 - Ga0059261_0722 0.23 +0.7 755,510 + Ga0059261_0722 0.38 +0.5 755,510 + Ga0059261_0722 0.38 -0.2 755,511 - Ga0059261_0722 0.38 -1.6 755,511 - Ga0059261_0722 0.38 +0.2 755,743 + Ga0059261_0722 0.58 -0.9 755,743 + Ga0059261_0722 0.58 -0.2 755,743 + Ga0059261_0722 0.58 -1.9 755,743 + Ga0059261_0722 0.58 -0.1 755,743 + Ga0059261_0722 0.58 -0.5 755,744 - Ga0059261_0722 0.59 -0.0 755,744 - Ga0059261_0722 0.59 +0.2 755,744 - Ga0059261_0722 0.59 -0.4 755,744 - Ga0059261_0722 0.59 +1.2 755,744 - Ga0059261_0722 0.59 -0.2 755,798 - Ga0059261_0722 0.63 -0.1 755,962 + Ga0059261_0722 0.78 +0.9 755,963 - Ga0059261_0722 0.78 -0.0
Or see this region's nucleotide sequence