Experiment: Rifampicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0634 and Ga0059261_0635 are separated by 38 nucleotides Ga0059261_0635 and Ga0059261_0636 are separated by 425 nucleotides
Ga0059261_0634: Ga0059261_0634 - Delta-aminolevulinic acid dehydratase, at 674,081 to 675,070
_0634
Ga0059261_0635: Ga0059261_0635 - choice-of-anchor A domain, at 675,109 to 676,173
_0635
Ga0059261_0636: Ga0059261_0636 - valyl-tRNA synthetase (EC 6.1.1.9), at 676,599 to 679,388
_0636
Position (kb) 675
676
677 Strain fitness (log2 ratio) -1
0
1
2 at 675.275 kb on + strand, within Ga0059261_0635 at 675.275 kb on + strand, within Ga0059261_0635 at 675.275 kb on + strand, within Ga0059261_0635 at 675.275 kb on + strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.276 kb on - strand, within Ga0059261_0635 at 675.279 kb on + strand, within Ga0059261_0635 at 675.279 kb on + strand, within Ga0059261_0635 at 675.280 kb on - strand, within Ga0059261_0635 at 675.280 kb on - strand, within Ga0059261_0635 at 675.280 kb on - strand, within Ga0059261_0635 at 675.280 kb on - strand, within Ga0059261_0635 at 675.280 kb on - strand, within Ga0059261_0635 at 675.287 kb on + strand, within Ga0059261_0635 at 675.288 kb on - strand at 675.288 kb on - strand, within Ga0059261_0635 at 675.288 kb on - strand, within Ga0059261_0635 at 675.986 kb on + strand, within Ga0059261_0635 at 675.986 kb on + strand, within Ga0059261_0635 at 675.986 kb on + strand, within Ga0059261_0635 at 675.986 kb on + strand, within Ga0059261_0635 at 675.986 kb on + strand, within Ga0059261_0635 at 675.987 kb on - strand, within Ga0059261_0635 at 675.987 kb on - strand, within Ga0059261_0635 at 676.026 kb on + strand, within Ga0059261_0635 at 676.026 kb on + strand, within Ga0059261_0635 at 676.026 kb on + strand, within Ga0059261_0635 at 676.026 kb on + strand, within Ga0059261_0635 at 676.026 kb on + strand, within Ga0059261_0635 at 676.027 kb on - strand, within Ga0059261_0635 at 676.167 kb on + strand at 676.167 kb on + strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.168 kb on - strand at 676.173 kb on + strand at 676.173 kb on + strand at 676.173 kb on + strand at 676.173 kb on + strand at 676.173 kb on + strand at 676.173 kb on + strand at 676.174 kb on - strand at 676.174 kb on - strand at 676.174 kb on - strand at 676.174 kb on - strand at 676.174 kb on - strand at 676.178 kb on + strand at 676.185 kb on + strand at 676.290 kb on + strand at 676.291 kb on - strand at 676.310 kb on - strand at 676.342 kb on + strand at 676.342 kb on + strand at 676.342 kb on + strand at 676.342 kb on + strand at 676.342 kb on + strand at 676.342 kb on + strand at 676.343 kb on - strand at 676.343 kb on - strand at 676.343 kb on - strand at 676.343 kb on - strand at 676.343 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Rifampicin 0.001 mg/ml remove 675,275 + Ga0059261_0635 0.16 +0.0 675,275 + Ga0059261_0635 0.16 -1.2 675,275 + Ga0059261_0635 0.16 -0.5 675,275 + Ga0059261_0635 0.16 +0.2 675,276 - Ga0059261_0635 0.16 -0.7 675,276 - Ga0059261_0635 0.16 -0.4 675,276 - Ga0059261_0635 0.16 +1.2 675,276 - Ga0059261_0635 0.16 +1.9 675,276 - Ga0059261_0635 0.16 +0.0 675,276 - Ga0059261_0635 0.16 +0.3 675,276 - Ga0059261_0635 0.16 -1.4 675,279 + Ga0059261_0635 0.16 +0.6 675,279 + Ga0059261_0635 0.16 -0.6 675,280 - Ga0059261_0635 0.16 +1.2 675,280 - Ga0059261_0635 0.16 +0.2 675,280 - Ga0059261_0635 0.16 +0.5 675,280 - Ga0059261_0635 0.16 +0.2 675,280 - Ga0059261_0635 0.16 +0.8 675,287 + Ga0059261_0635 0.17 +0.3 675,288 - +0.9 675,288 - Ga0059261_0635 0.17 -0.2 675,288 - Ga0059261_0635 0.17 +0.2 675,986 + Ga0059261_0635 0.82 -1.4 675,986 + Ga0059261_0635 0.82 -0.7 675,986 + Ga0059261_0635 0.82 -0.6 675,986 + Ga0059261_0635 0.82 +0.1 675,986 + Ga0059261_0635 0.82 +0.3 675,987 - Ga0059261_0635 0.82 +1.3 675,987 - Ga0059261_0635 0.82 -0.1 676,026 + Ga0059261_0635 0.86 +0.9 676,026 + Ga0059261_0635 0.86 -0.5 676,026 + Ga0059261_0635 0.86 +0.9 676,026 + Ga0059261_0635 0.86 -1.3 676,026 + Ga0059261_0635 0.86 +0.2 676,027 - Ga0059261_0635 0.86 +0.6 676,167 + +0.7 676,167 + +0.4 676,168 - -0.5 676,168 - +0.3 676,168 - +0.4 676,168 - +0.7 676,168 - -0.2 676,168 - -0.3 676,168 - +1.4 676,173 + -1.0 676,173 + -0.6 676,173 + -0.2 676,173 + -0.2 676,173 + -0.8 676,173 + +0.9 676,174 - -0.2 676,174 - -0.1 676,174 - -0.0 676,174 - +0.4 676,174 - +0.6 676,178 + -0.4 676,185 + +0.6 676,290 + +0.3 676,291 - -0.6 676,310 - +0.4 676,342 + -0.1 676,342 + -0.2 676,342 + +0.7 676,342 + +0.4 676,342 + -0.1 676,342 + -0.5 676,343 - +0.5 676,343 - -0.3 676,343 - -0.3 676,343 - -0.1 676,343 - +0.1
Or see this region's nucleotide sequence