Experiment: inner cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30850 and AZOBR_RS30855 are separated by 388 nucleotides AZOBR_RS30855 and AZOBR_RS30860 overlap by 8 nucleotides
AZOBR_RS30850: AZOBR_RS30850 - hypothetical protein, at 287,430 to 289,880
_RS30850
AZOBR_RS30855: AZOBR_RS30855 - chemotaxis protein CheY, at 290,269 to 290,751
_RS30855
AZOBR_RS30860: AZOBR_RS30860 - sensor histidine kinase, at 290,744 to 293,035
_RS30860
Position (kb) 287
288
289
290 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 286.497 kb on + strand at 286.498 kb on - strand at 287.136 kb on + strand at 287.136 kb on + strand at 287.354 kb on + strand at 287.354 kb on + strand at 287.355 kb on - strand at 287.355 kb on - strand at 287.530 kb on + strand at 287.530 kb on + strand at 287.537 kb on - strand at 287.884 kb on + strand, within AZOBR_RS30850 at 287.885 kb on - strand, within AZOBR_RS30850 at 287.885 kb on - strand, within AZOBR_RS30850 at 287.885 kb on - strand, within AZOBR_RS30850 at 287.960 kb on - strand, within AZOBR_RS30850 at 287.960 kb on - strand, within AZOBR_RS30850 at 287.960 kb on - strand, within AZOBR_RS30850 at 288.086 kb on - strand, within AZOBR_RS30850 at 288.086 kb on - strand, within AZOBR_RS30850 at 288.086 kb on - strand, within AZOBR_RS30850 at 288.086 kb on - strand, within AZOBR_RS30850 at 288.445 kb on + strand, within AZOBR_RS30850 at 288.446 kb on - strand, within AZOBR_RS30850 at 288.877 kb on + strand, within AZOBR_RS30850 at 288.877 kb on + strand, within AZOBR_RS30850 at 288.878 kb on - strand, within AZOBR_RS30850 at 288.878 kb on - strand, within AZOBR_RS30850 at 288.965 kb on - strand, within AZOBR_RS30850 at 289.243 kb on + strand, within AZOBR_RS30850 at 289.360 kb on + strand, within AZOBR_RS30850 at 289.361 kb on - strand, within AZOBR_RS30850 at 289.361 kb on - strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.381 kb on + strand, within AZOBR_RS30850 at 289.382 kb on - strand, within AZOBR_RS30850 at 289.382 kb on - strand, within AZOBR_RS30850 at 289.384 kb on + strand, within AZOBR_RS30850 at 289.523 kb on - strand, within AZOBR_RS30850 at 289.804 kb on + strand at 289.805 kb on - strand at 289.805 kb on - strand at 289.943 kb on - strand at 289.943 kb on - strand at 289.943 kb on - strand at 290.127 kb on + strand at 290.429 kb on + strand, within AZOBR_RS30855 at 290.429 kb on + strand, within AZOBR_RS30855 at 290.430 kb on - strand, within AZOBR_RS30855 at 290.430 kb on - strand, within AZOBR_RS30855 at 290.802 kb on + strand at 290.802 kb on + strand at 290.803 kb on - strand at 290.803 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, LB soft agar motility assay remove 286,497 + +0.4 286,498 - +0.3 287,136 + +1.2 287,136 + -1.0 287,354 + +0.1 287,354 + -0.8 287,355 - -1.2 287,355 - +0.3 287,530 + +0.9 287,530 + -2.3 287,537 - +1.2 287,884 + AZOBR_RS30850 0.19 -0.2 287,885 - AZOBR_RS30850 0.19 +1.6 287,885 - AZOBR_RS30850 0.19 +0.5 287,885 - AZOBR_RS30850 0.19 +0.9 287,960 - AZOBR_RS30850 0.22 +0.2 287,960 - AZOBR_RS30850 0.22 -0.7 287,960 - AZOBR_RS30850 0.22 +0.2 288,086 - AZOBR_RS30850 0.27 +0.9 288,086 - AZOBR_RS30850 0.27 -0.4 288,086 - AZOBR_RS30850 0.27 +2.0 288,086 - AZOBR_RS30850 0.27 -0.4 288,445 + AZOBR_RS30850 0.41 +0.9 288,446 - AZOBR_RS30850 0.41 -3.1 288,877 + AZOBR_RS30850 0.59 +1.7 288,877 + AZOBR_RS30850 0.59 +0.7 288,878 - AZOBR_RS30850 0.59 -0.5 288,878 - AZOBR_RS30850 0.59 -0.5 288,965 - AZOBR_RS30850 0.63 -0.4 289,243 + AZOBR_RS30850 0.74 +0.7 289,360 + AZOBR_RS30850 0.79 -0.2 289,361 - AZOBR_RS30850 0.79 +0.4 289,361 - AZOBR_RS30850 0.79 -0.3 289,381 + AZOBR_RS30850 0.80 -1.3 289,381 + AZOBR_RS30850 0.80 -2.3 289,381 + AZOBR_RS30850 0.80 -0.1 289,381 + AZOBR_RS30850 0.80 -0.3 289,381 + AZOBR_RS30850 0.80 +0.5 289,381 + AZOBR_RS30850 0.80 +1.2 289,382 - AZOBR_RS30850 0.80 +0.1 289,382 - AZOBR_RS30850 0.80 -0.7 289,384 + AZOBR_RS30850 0.80 -1.6 289,523 - AZOBR_RS30850 0.85 +0.9 289,804 + +0.7 289,805 - -0.4 289,805 - -0.9 289,943 - -3.6 289,943 - -2.6 289,943 - +0.2 290,127 + -1.2 290,429 + AZOBR_RS30855 0.33 +1.4 290,429 + AZOBR_RS30855 0.33 -2.6 290,430 - AZOBR_RS30855 0.33 +0.2 290,430 - AZOBR_RS30855 0.33 +1.4 290,802 + -1.2 290,802 + +0.5 290,803 - +1.9 290,803 - +0.8
Or see this region's nucleotide sequence