Experiment: inner cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23530 and AZOBR_RS23535 are separated by 65 nucleotides AZOBR_RS23535 and AZOBR_RS23540 are separated by 152 nucleotides
AZOBR_RS23530: AZOBR_RS23530 - putative Major facilitator family transporter, at 307,321 to 308,514
_RS23530
AZOBR_RS23535: AZOBR_RS23535 - exodeoxyribonuclease V, at 308,580 to 309,776
_RS23535
AZOBR_RS23540: AZOBR_RS23540 - tetrathionate reductase subunit A, at 309,929 to 313,036
_RS23540
Position (kb) 308
309
310 Strain fitness (log2 ratio) -2
-1
0
1
2 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.663 kb on + strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.664 kb on - strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.744 kb on + strand, within AZOBR_RS23530 at 307.844 kb on - strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.927 kb on + strand, within AZOBR_RS23530 at 307.928 kb on - strand, within AZOBR_RS23530 at 308.272 kb on + strand, within AZOBR_RS23530 at 308.273 kb on - strand, within AZOBR_RS23530 at 308.384 kb on + strand, within AZOBR_RS23530 at 308.431 kb on + strand at 308.542 kb on + strand at 308.543 kb on - strand at 308.851 kb on - strand, within AZOBR_RS23535 at 309.459 kb on - strand, within AZOBR_RS23535 at 309.522 kb on + strand, within AZOBR_RS23535 at 309.523 kb on - strand, within AZOBR_RS23535 at 309.682 kb on - strand at 309.682 kb on - strand at 310.333 kb on - strand, within AZOBR_RS23540 at 310.503 kb on + strand, within AZOBR_RS23540 at 310.744 kb on - strand, within AZOBR_RS23540
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, LB soft agar motility assay remove 307,663 + AZOBR_RS23530 0.29 +1.9 307,663 + AZOBR_RS23530 0.29 -0.8 307,663 + AZOBR_RS23530 0.29 -0.2 307,664 - AZOBR_RS23530 0.29 +0.5 307,664 - AZOBR_RS23530 0.29 -0.0 307,664 - AZOBR_RS23530 0.29 -2.1 307,664 - AZOBR_RS23530 0.29 +0.3 307,744 + AZOBR_RS23530 0.35 -0.4 307,744 + AZOBR_RS23530 0.35 -1.4 307,744 + AZOBR_RS23530 0.35 -0.7 307,844 - AZOBR_RS23530 0.44 -0.4 307,927 + AZOBR_RS23530 0.51 -0.1 307,927 + AZOBR_RS23530 0.51 +0.2 307,927 + AZOBR_RS23530 0.51 -0.6 307,927 + AZOBR_RS23530 0.51 +0.9 307,927 + AZOBR_RS23530 0.51 +0.2 307,927 + AZOBR_RS23530 0.51 +0.2 307,928 - AZOBR_RS23530 0.51 +0.4 308,272 + AZOBR_RS23530 0.80 -2.3 308,273 - AZOBR_RS23530 0.80 -0.4 308,384 + AZOBR_RS23530 0.89 +0.4 308,431 + -0.4 308,542 + +1.1 308,543 - -1.5 308,851 - AZOBR_RS23535 0.23 -1.5 309,459 - AZOBR_RS23535 0.73 +0.0 309,522 + AZOBR_RS23535 0.79 -0.2 309,523 - AZOBR_RS23535 0.79 -0.3 309,682 - +2.4 309,682 - +1.1 310,333 - AZOBR_RS23540 0.13 -0.5 310,503 + AZOBR_RS23540 0.18 -0.5 310,744 - AZOBR_RS23540 0.26 +0.4
Or see this region's nucleotide sequence