Experiment: inner cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21615 and AZOBR_RS21620 are separated by 68 nucleotides AZOBR_RS21620 and AZOBR_RS21625 are separated by 16 nucleotides AZOBR_RS21625 and AZOBR_RS21630 are separated by 83 nucleotides AZOBR_RS21630 and AZOBR_RS21635 are separated by 225 nucleotides
AZOBR_RS21615: AZOBR_RS21615 - flagellar protein, at 1,624,491 to 1,624,847
_RS21615
AZOBR_RS21620: AZOBR_RS21620 - hypothetical protein, at 1,624,916 to 1,625,554
_RS21620
AZOBR_RS21625: AZOBR_RS21625 - hypothetical protein, at 1,625,571 to 1,630,889
_RS21625
AZOBR_RS21630: AZOBR_RS21630 - hypothetical protein, at 1,630,973 to 1,631,155
_RS21630
AZOBR_RS21635: AZOBR_RS21635 - hypothetical protein, at 1,631,381 to 1,634,908
_RS21635
Position (kb) 1625
1626
1627
1628
1629
1630
1631 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 1624.584 kb on + strand at 1625.024 kb on + strand, within AZOBR_RS21620 at 1625.024 kb on + strand, within AZOBR_RS21620 at 1625.025 kb on - strand, within AZOBR_RS21620 at 1625.025 kb on - strand, within AZOBR_RS21620 at 1625.090 kb on + strand, within AZOBR_RS21620 at 1626.088 kb on - strand at 1626.088 kb on - strand at 1626.291 kb on + strand, within AZOBR_RS21625 at 1626.291 kb on + strand, within AZOBR_RS21625 at 1626.291 kb on + strand, within AZOBR_RS21625 at 1626.454 kb on - strand, within AZOBR_RS21625 at 1626.954 kb on + strand, within AZOBR_RS21625 at 1626.954 kb on + strand, within AZOBR_RS21625 at 1626.954 kb on + strand, within AZOBR_RS21625 at 1626.954 kb on + strand, within AZOBR_RS21625 at 1626.954 kb on + strand, within AZOBR_RS21625 at 1627.260 kb on + strand, within AZOBR_RS21625 at 1628.226 kb on + strand, within AZOBR_RS21625 at 1628.226 kb on + strand, within AZOBR_RS21625 at 1628.227 kb on - strand at 1628.227 kb on - strand, within AZOBR_RS21625 at 1628.817 kb on + strand, within AZOBR_RS21625 at 1629.261 kb on + strand, within AZOBR_RS21625 at 1630.459 kb on - strand at 1630.890 kb on + strand at 1630.890 kb on + strand at 1630.975 kb on - strand at 1631.135 kb on + strand, within AZOBR_RS21630 at 1631.260 kb on - strand at 1631.399 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction inner cut, LB soft agar motility assay remove 1,624,584 + -0.0 1,625,024 + AZOBR_RS21620 0.17 -0.7 1,625,024 + AZOBR_RS21620 0.17 +1.0 1,625,025 - AZOBR_RS21620 0.17 -2.7 1,625,025 - AZOBR_RS21620 0.17 +4.1 1,625,090 + AZOBR_RS21620 0.27 -1.0 1,626,088 - +4.5 1,626,088 - +2.2 1,626,291 + AZOBR_RS21625 0.14 +0.9 1,626,291 + AZOBR_RS21625 0.14 -0.4 1,626,291 + AZOBR_RS21625 0.14 +1.2 1,626,454 - AZOBR_RS21625 0.17 +4.7 1,626,954 + AZOBR_RS21625 0.26 +1.0 1,626,954 + AZOBR_RS21625 0.26 +3.7 1,626,954 + AZOBR_RS21625 0.26 -1.4 1,626,954 + AZOBR_RS21625 0.26 -0.8 1,626,954 + AZOBR_RS21625 0.26 -1.6 1,627,260 + AZOBR_RS21625 0.32 +0.4 1,628,226 + AZOBR_RS21625 0.50 -1.6 1,628,226 + AZOBR_RS21625 0.50 +0.4 1,628,227 - -0.4 1,628,227 - AZOBR_RS21625 0.50 +1.7 1,628,817 + AZOBR_RS21625 0.61 +0.7 1,629,261 + AZOBR_RS21625 0.69 +2.5 1,630,459 - -2.5 1,630,890 + +0.3 1,630,890 + +2.0 1,630,975 - +0.3 1,631,135 + AZOBR_RS21630 0.89 -1.2 1,631,260 - -2.0 1,631,399 - -0.5
Or see this region's nucleotide sequence