Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28240
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
6,525,627 | + | AO356_28235 | 0.51 | -0.0 | |
6,525,628 | - | AO356_28235 | 0.51 | +0.5 | |
6,525,822 | + | AO356_28235 | 0.61 | +0.6 | |
6,526,087 | - | AO356_28235 | 0.76 | +0.4 | |
6,526,191 | + | AO356_28235 | 0.81 | -0.4 | |
6,526,751 | + | AO356_28240 | 0.21 | -1.5 | |
6,527,088 | - | AO356_28240 | 0.57 | -0.7 | |
6,527,321 | + | AO356_28240 | 0.82 | -0.6 | |
6,527,321 | + | AO356_28240 | 0.82 | -0.5 | |
6,527,322 | - | AO356_28240 | 0.82 | -0.1 | |
6,527,372 | + | AO356_28240 | 0.87 | -1.1 | |
6,527,383 | + | AO356_28240 | 0.88 | +0.6 | |
6,527,399 | + | -0.0 | |||
6,527,439 | - | -0.7 | |||
6,527,439 | - | -1.1 | |||
6,527,557 | + | +0.1 | |||
6,527,558 | - | +0.2 | |||
6,527,558 | - | -1.0 | |||
6,527,759 | + | AO356_28245 | 0.17 | +0.1 | |
6,527,759 | + | AO356_28245 | 0.17 | +0.3 | |
6,528,303 | - | AO356_28245 | 0.62 | +0.4 | |
6,528,473 | + | AO356_28245 | 0.76 | +0.5 | |
6,528,474 | - | AO356_28245 | 0.76 | +0.4 | |
6,528,474 | - | AO356_28245 | 0.76 | -0.8 |
Or see this region's nucleotide sequence