Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28230
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
6,522,334 | + | AO356_28225 | 0.46 | -0.7 | |
6,522,402 | + | AO356_28225 | 0.50 | +0.7 | |
6,522,552 | + | AO356_28225 | 0.59 | -1.4 | |
6,522,679 | - | AO356_28225 | 0.66 | +0.0 | |
6,522,732 | + | AO356_28225 | 0.69 | -0.4 | |
6,522,792 | + | AO356_28225 | 0.73 | +0.3 | |
6,522,844 | + | AO356_28225 | 0.76 | +0.3 | |
6,522,866 | - | AO356_28225 | 0.77 | +0.4 | |
6,523,168 | + | -0.5 | |||
6,523,168 | + | -1.3 | |||
6,523,169 | - | +0.4 | |||
6,523,305 | + | +1.0 | |||
6,523,912 | + | AO356_28230 | 0.59 | +0.1 | |
6,524,356 | - | -0.1 | |||
6,524,593 | - | +0.2 | |||
6,524,835 | + | -0.7 | |||
6,524,904 | - | AO356_28235 | 0.12 | +0.4 | |
6,524,904 | - | AO356_28235 | 0.12 | -0.3 | |
6,525,186 | + | AO356_28235 | 0.27 | +0.4 | |
6,525,195 | + | AO356_28235 | 0.27 | +0.6 | |
6,525,195 | + | AO356_28235 | 0.27 | +0.3 | |
6,525,195 | + | AO356_28235 | 0.27 | +1.4 | |
6,525,196 | - | AO356_28235 | 0.27 | -0.1 | |
6,525,196 | - | AO356_28235 | 0.27 | -0.7 | |
6,525,198 | - | AO356_28235 | 0.27 | +0.0 | |
6,525,270 | - | AO356_28235 | 0.31 | +0.1 |
Or see this region's nucleotide sequence