Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22625 and AO356_22630 are separated by 10 nucleotides AO356_22630 and AO356_22635 are separated by 857 nucleotides
AO356_22625: AO356_22625 - nitrate ABC transporter ATP-binding protein, at 5,055,547 to 5,056,851
_22625
AO356_22630: AO356_22630 - sulfonate ABC transporter permease, at 5,056,862 to 5,058,583
_22630
AO356_22635: AO356_22635 - transposase, at 5,059,441 to 5,059,743
_22635
Position (kb)
5056
5057
5058
5059 Strain fitness (log2 ratio)
-2
-1
0
1 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.245 kb on + strand, within AO356_22625 at 5056.245 kb on + strand, within AO356_22625 at 5056.333 kb on + strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.473 kb on + strand, within AO356_22625 at 5056.522 kb on + strand, within AO356_22625 at 5056.797 kb on - strand at 5056.840 kb on + strand at 5056.841 kb on - strand at 5056.841 kb on - strand at 5056.897 kb on - strand at 5056.897 kb on - strand at 5057.025 kb on + strand at 5057.025 kb on + strand at 5057.025 kb on + strand at 5057.025 kb on + strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.115 kb on + strand, within AO356_22630 at 5057.116 kb on - strand, within AO356_22630 at 5057.241 kb on + strand, within AO356_22630 at 5057.241 kb on + strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.494 kb on + strand, within AO356_22630 at 5057.494 kb on + strand, within AO356_22630 at 5057.736 kb on + strand, within AO356_22630 at 5057.736 kb on + strand, within AO356_22630 at 5057.829 kb on + strand, within AO356_22630 at 5057.829 kb on + strand, within AO356_22630 at 5057.829 kb on + strand, within AO356_22630 at 5058.097 kb on - strand, within AO356_22630 at 5058.129 kb on + strand, within AO356_22630 at 5058.238 kb on + strand, within AO356_22630 at 5058.239 kb on - strand, within AO356_22630 at 5058.239 kb on - strand, within AO356_22630 at 5058.239 kb on - strand, within AO356_22630 at 5058.239 kb on - strand, within AO356_22630 at 5058.277 kb on + strand, within AO356_22630 at 5058.402 kb on + strand, within AO356_22630 at 5058.402 kb on + strand, within AO356_22630 at 5058.402 kb on + strand, within AO356_22630 at 5058.403 kb on - strand, within AO356_22630 at 5058.403 kb on - strand, within AO356_22630 at 5058.403 kb on - strand, within AO356_22630 at 5058.403 kb on - strand, within AO356_22630 at 5058.488 kb on + strand at 5058.488 kb on + strand at 5058.488 kb on + strand at 5058.489 kb on - strand at 5058.489 kb on - strand at 5058.489 kb on - strand at 5058.489 kb on - strand at 5058.527 kb on + strand at 5058.527 kb on + strand at 5058.527 kb on + strand at 5058.528 kb on - strand at 5058.621 kb on + strand at 5058.621 kb on + strand at 5058.622 kb on - strand at 5058.624 kb on + strand at 5058.625 kb on - strand at 5058.625 kb on - strand at 5058.625 kb on - strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.723 kb on + strand at 5058.724 kb on - strand at 5058.724 kb on - strand at 5058.724 kb on - strand at 5058.724 kb on - strand at 5058.724 kb on - strand at 5058.769 kb on + strand at 5058.771 kb on + strand at 5058.771 kb on + strand at 5058.772 kb on - strand at 5058.772 kb on - strand at 5058.772 kb on - strand at 5058.772 kb on - strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.779 kb on + strand at 5058.780 kb on - strand at 5058.780 kb on - strand at 5058.780 kb on - strand at 5058.780 kb on - strand at 5058.781 kb on + strand at 5058.782 kb on - strand at 5058.813 kb on + strand at 5058.856 kb on + strand at 5058.857 kb on - strand at 5058.857 kb on - strand at 5058.857 kb on - strand at 5058.956 kb on - strand at 5058.963 kb on + strand at 5058.988 kb on - strand at 5059.014 kb on + strand at 5059.073 kb on + strand at 5059.074 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 5,056,100 + AO356_22625 0.42 -0.8 5,056,100 + AO356_22625 0.42 +0.1 5,056,100 + AO356_22625 0.42 +0.1 5,056,100 + AO356_22625 0.42 -0.1 5,056,100 + AO356_22625 0.42 -0.3 5,056,101 - AO356_22625 0.42 -0.7 5,056,101 - AO356_22625 0.42 +0.8 5,056,101 - AO356_22625 0.42 -0.2 5,056,101 - AO356_22625 0.42 -0.0 5,056,245 + AO356_22625 0.53 +0.1 5,056,245 + AO356_22625 0.53 +0.6 5,056,333 + AO356_22625 0.60 +0.3 5,056,334 - AO356_22625 0.60 -0.3 5,056,334 - AO356_22625 0.60 -0.1 5,056,334 - AO356_22625 0.60 +0.4 5,056,473 + AO356_22625 0.71 -0.3 5,056,522 + AO356_22625 0.75 -0.7 5,056,797 - -0.6 5,056,840 + +0.2 5,056,841 - +0.4 5,056,841 - -0.6 5,056,897 - +0.2 5,056,897 - +0.3 5,057,025 + -0.2 5,057,025 + -0.7 5,057,025 + -0.2 5,057,025 + +0.3 5,057,026 - +0.6 5,057,026 - -0.2 5,057,026 - +0.6 5,057,026 - +0.8 5,057,026 - +0.2 5,057,112 + AO356_22630 0.15 +0.4 5,057,112 + AO356_22630 0.15 -0.6 5,057,112 + AO356_22630 0.15 +0.7 5,057,112 + AO356_22630 0.15 +0.3 5,057,112 + AO356_22630 0.15 +1.0 5,057,113 - AO356_22630 0.15 -1.9 5,057,113 - AO356_22630 0.15 +0.3 5,057,113 - AO356_22630 0.15 +1.0 5,057,113 - AO356_22630 0.15 -0.6 5,057,113 - AO356_22630 0.15 +0.4 5,057,113 - AO356_22630 0.15 -0.2 5,057,113 - AO356_22630 0.15 +0.6 5,057,113 - AO356_22630 0.15 +0.6 5,057,115 + AO356_22630 0.15 -0.4 5,057,116 - AO356_22630 0.15 +0.5 5,057,241 + AO356_22630 0.22 -1.9 5,057,241 + AO356_22630 0.22 -1.3 5,057,242 - AO356_22630 0.22 +0.3 5,057,242 - AO356_22630 0.22 +0.7 5,057,242 - AO356_22630 0.22 +0.4 5,057,242 - AO356_22630 0.22 +0.2 5,057,242 - AO356_22630 0.22 -0.0 5,057,242 - AO356_22630 0.22 +0.1 5,057,433 - AO356_22630 0.33 -0.0 5,057,433 - AO356_22630 0.33 -0.2 5,057,433 - AO356_22630 0.33 -1.3 5,057,433 - AO356_22630 0.33 +0.6 5,057,494 + AO356_22630 0.37 -0.9 5,057,494 + AO356_22630 0.37 -0.1 5,057,736 + AO356_22630 0.51 +0.0 5,057,736 + AO356_22630 0.51 -0.4 5,057,829 + AO356_22630 0.56 -0.1 5,057,829 + AO356_22630 0.56 +0.3 5,057,829 + AO356_22630 0.56 +1.2 5,058,097 - AO356_22630 0.72 +0.9 5,058,129 + AO356_22630 0.74 +0.5 5,058,238 + AO356_22630 0.80 -1.2 5,058,239 - AO356_22630 0.80 +0.8 5,058,239 - AO356_22630 0.80 +0.9 5,058,239 - AO356_22630 0.80 +0.7 5,058,239 - AO356_22630 0.80 -0.4 5,058,277 + AO356_22630 0.82 -0.2 5,058,402 + AO356_22630 0.89 +0.0 5,058,402 + AO356_22630 0.89 +0.5 5,058,402 + AO356_22630 0.89 +0.1 5,058,403 - AO356_22630 0.89 -0.4 5,058,403 - AO356_22630 0.89 +0.4 5,058,403 - AO356_22630 0.89 +0.1 5,058,403 - AO356_22630 0.89 +0.0 5,058,488 + +0.5 5,058,488 + +0.5 5,058,488 + -1.5 5,058,489 - -0.5 5,058,489 - -0.7 5,058,489 - +0.5 5,058,489 - -0.0 5,058,527 + +0.2 5,058,527 + +0.5 5,058,527 + +0.6 5,058,528 - +0.7 5,058,621 + +0.5 5,058,621 + +0.1 5,058,622 - -0.9 5,058,624 + -1.5 5,058,625 - +1.7 5,058,625 - -0.1 5,058,625 - +0.5 5,058,723 + -0.3 5,058,723 + -0.4 5,058,723 + -0.6 5,058,723 + +0.3 5,058,723 + -0.6 5,058,723 + -0.1 5,058,723 + +0.1 5,058,724 - +0.4 5,058,724 - +0.4 5,058,724 - +0.0 5,058,724 - +0.3 5,058,724 - +0.0 5,058,769 + +0.8 5,058,771 + -0.2 5,058,771 + +0.3 5,058,772 - -0.1 5,058,772 - +0.0 5,058,772 - +0.6 5,058,772 - +0.7 5,058,779 + +0.3 5,058,779 + -0.1 5,058,779 + -0.1 5,058,779 + +0.8 5,058,779 + -1.2 5,058,779 + -0.2 5,058,779 + +0.6 5,058,779 + +0.0 5,058,779 + -0.4 5,058,779 + -0.2 5,058,779 + +0.3 5,058,779 + +0.3 5,058,780 - +0.8 5,058,780 - -0.4 5,058,780 - -1.0 5,058,780 - +0.0 5,058,781 + +0.3 5,058,782 - -0.2 5,058,813 + -0.1 5,058,856 + -0.0 5,058,857 - -0.2 5,058,857 - -0.3 5,058,857 - +0.5 5,058,956 - -0.2 5,058,963 + -0.2 5,058,988 - +0.3 5,059,014 + +0.1 5,059,073 + -0.6 5,059,074 - +1.3
Or see this region's nucleotide sequence