Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19745 and AO356_19750 are separated by 146 nucleotides AO356_19750 and AO356_19755 are separated by 130 nucleotides
AO356_19745: AO356_19745 - heat-shock protein Hsp90, at 4,427,577 to 4,429,481
_19745
AO356_19750: AO356_19750 - dienelactone hydrolase, at 4,429,628 to 4,430,356
_19750
AO356_19755: AO356_19755 - pirin, at 4,430,487 to 4,431,347
_19755
Position (kb)
4429
4430
4431 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4428.706 kb on - strand, within AO356_19745 at 4428.885 kb on + strand, within AO356_19745 at 4428.885 kb on + strand, within AO356_19745 at 4428.885 kb on + strand, within AO356_19745 at 4428.886 kb on - strand, within AO356_19745 at 4428.886 kb on - strand, within AO356_19745 at 4428.886 kb on - strand, within AO356_19745 at 4428.886 kb on - strand, within AO356_19745 at 4428.889 kb on - strand, within AO356_19745 at 4428.889 kb on - strand, within AO356_19745 at 4428.906 kb on + strand, within AO356_19745 at 4428.907 kb on - strand, within AO356_19745 at 4428.984 kb on - strand, within AO356_19745 at 4429.005 kb on + strand, within AO356_19745 at 4429.005 kb on + strand, within AO356_19745 at 4429.005 kb on + strand, within AO356_19745 at 4429.005 kb on + strand, within AO356_19745 at 4429.005 kb on + strand, within AO356_19745 at 4429.006 kb on - strand, within AO356_19745 at 4429.006 kb on - strand, within AO356_19745 at 4429.437 kb on + strand at 4429.437 kb on + strand at 4429.438 kb on - strand at 4429.438 kb on - strand at 4429.438 kb on - strand at 4429.480 kb on - strand at 4429.547 kb on + strand at 4429.547 kb on + strand at 4429.547 kb on + strand at 4429.548 kb on - strand at 4429.548 kb on - strand at 4429.548 kb on - strand at 4429.562 kb on - strand at 4429.562 kb on - strand at 4429.658 kb on + strand at 4429.658 kb on + strand at 4429.659 kb on - strand at 4429.659 kb on - strand at 4429.679 kb on + strand at 4429.679 kb on + strand at 4429.679 kb on + strand at 4429.679 kb on + strand at 4429.680 kb on - strand at 4429.758 kb on + strand, within AO356_19750 at 4429.806 kb on - strand, within AO356_19750 at 4429.806 kb on - strand, within AO356_19750 at 4429.829 kb on + strand, within AO356_19750 at 4429.830 kb on - strand, within AO356_19750 at 4429.918 kb on + strand, within AO356_19750 at 4429.919 kb on - strand, within AO356_19750 at 4430.080 kb on + strand, within AO356_19750 at 4430.080 kb on + strand, within AO356_19750 at 4430.081 kb on - strand, within AO356_19750 at 4430.081 kb on - strand, within AO356_19750 at 4430.226 kb on - strand, within AO356_19750 at 4430.266 kb on + strand, within AO356_19750 at 4430.267 kb on - strand, within AO356_19750 at 4430.285 kb on + strand at 4430.286 kb on - strand at 4430.286 kb on - strand at 4430.286 kb on - strand at 4430.326 kb on + strand at 4430.326 kb on + strand at 4430.326 kb on + strand at 4430.326 kb on + strand at 4430.326 kb on + strand at 4430.327 kb on - strand at 4430.327 kb on - strand at 4430.410 kb on + strand at 4430.411 kb on - strand at 4430.411 kb on - strand at 4430.411 kb on - strand at 4430.423 kb on + strand at 4430.424 kb on - strand at 4430.488 kb on + strand at 4430.694 kb on + strand, within AO356_19755 at 4430.694 kb on + strand, within AO356_19755 at 4430.694 kb on + strand, within AO356_19755 at 4430.695 kb on - strand, within AO356_19755 at 4430.695 kb on - strand, within AO356_19755 at 4430.695 kb on - strand, within AO356_19755 at 4430.715 kb on + strand, within AO356_19755 at 4430.755 kb on + strand, within AO356_19755 at 4430.755 kb on + strand, within AO356_19755 at 4430.755 kb on + strand, within AO356_19755 at 4430.755 kb on + strand, within AO356_19755 at 4430.755 kb on + strand, within AO356_19755 at 4430.755 kb on + strand, within AO356_19755 at 4430.756 kb on - strand, within AO356_19755 at 4430.756 kb on - strand, within AO356_19755 at 4430.756 kb on - strand, within AO356_19755 at 4430.756 kb on - strand, within AO356_19755 at 4430.824 kb on + strand, within AO356_19755 at 4430.824 kb on + strand, within AO356_19755 at 4430.824 kb on + strand, within AO356_19755 at 4430.825 kb on - strand, within AO356_19755 at 4430.825 kb on - strand, within AO356_19755 at 4430.944 kb on + strand, within AO356_19755 at 4430.945 kb on - strand, within AO356_19755 at 4430.945 kb on - strand, within AO356_19755 at 4430.945 kb on - strand, within AO356_19755 at 4430.965 kb on + strand, within AO356_19755 at 4430.966 kb on - strand, within AO356_19755 at 4431.151 kb on + strand, within AO356_19755 at 4431.151 kb on + strand, within AO356_19755 at 4431.151 kb on + strand, within AO356_19755 at 4431.151 kb on + strand, within AO356_19755 at 4431.151 kb on + strand, within AO356_19755 at 4431.152 kb on - strand, within AO356_19755 at 4431.152 kb on - strand, within AO356_19755 at 4431.152 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,428,706 - AO356_19745 0.59 +1.2 4,428,885 + AO356_19745 0.69 -1.2 4,428,885 + AO356_19745 0.69 -0.4 4,428,885 + AO356_19745 0.69 -0.4 4,428,886 - AO356_19745 0.69 -0.8 4,428,886 - AO356_19745 0.69 +0.8 4,428,886 - AO356_19745 0.69 -0.8 4,428,886 - AO356_19745 0.69 -1.2 4,428,889 - AO356_19745 0.69 -0.2 4,428,889 - AO356_19745 0.69 +2.2 4,428,906 + AO356_19745 0.70 -0.7 4,428,907 - AO356_19745 0.70 +1.2 4,428,984 - AO356_19745 0.74 -1.2 4,429,005 + AO356_19745 0.75 +1.4 4,429,005 + AO356_19745 0.75 -0.5 4,429,005 + AO356_19745 0.75 +1.0 4,429,005 + AO356_19745 0.75 +0.1 4,429,005 + AO356_19745 0.75 -2.5 4,429,006 - AO356_19745 0.75 +0.1 4,429,006 - AO356_19745 0.75 -0.5 4,429,437 + -1.1 4,429,437 + +1.2 4,429,438 - +1.2 4,429,438 - -1.1 4,429,438 - -0.4 4,429,480 - +0.7 4,429,547 + -0.5 4,429,547 + +1.1 4,429,547 + -0.4 4,429,548 - +0.1 4,429,548 - -0.4 4,429,548 - -1.6 4,429,562 - -0.0 4,429,562 - +0.1 4,429,658 + -0.3 4,429,658 + +0.3 4,429,659 - +1.1 4,429,659 - -0.4 4,429,679 + -0.9 4,429,679 + -0.5 4,429,679 + +0.1 4,429,679 + +0.5 4,429,680 - +0.3 4,429,758 + AO356_19750 0.18 -0.4 4,429,806 - AO356_19750 0.24 -0.7 4,429,806 - AO356_19750 0.24 -1.0 4,429,829 + AO356_19750 0.28 +0.3 4,429,830 - AO356_19750 0.28 -0.1 4,429,918 + AO356_19750 0.40 +0.0 4,429,919 - AO356_19750 0.40 -0.1 4,430,080 + AO356_19750 0.62 +0.1 4,430,080 + AO356_19750 0.62 -0.1 4,430,081 - AO356_19750 0.62 +0.2 4,430,081 - AO356_19750 0.62 -1.6 4,430,226 - AO356_19750 0.82 +0.1 4,430,266 + AO356_19750 0.88 -1.5 4,430,267 - AO356_19750 0.88 +0.7 4,430,285 + -0.8 4,430,286 - +0.6 4,430,286 - -0.3 4,430,286 - -0.5 4,430,326 + -0.1 4,430,326 + +0.2 4,430,326 + +1.4 4,430,326 + +0.2 4,430,326 + +0.8 4,430,327 - +1.0 4,430,327 - +0.4 4,430,410 + +0.6 4,430,411 - +0.1 4,430,411 - -0.2 4,430,411 - +0.6 4,430,423 + +0.5 4,430,424 - +0.7 4,430,488 + +0.1 4,430,694 + AO356_19755 0.24 +0.1 4,430,694 + AO356_19755 0.24 -0.2 4,430,694 + AO356_19755 0.24 -0.6 4,430,695 - AO356_19755 0.24 +0.8 4,430,695 - AO356_19755 0.24 -0.5 4,430,695 - AO356_19755 0.24 +0.9 4,430,715 + AO356_19755 0.26 +0.3 4,430,755 + AO356_19755 0.31 -0.3 4,430,755 + AO356_19755 0.31 -0.6 4,430,755 + AO356_19755 0.31 -0.8 4,430,755 + AO356_19755 0.31 -0.3 4,430,755 + AO356_19755 0.31 -0.4 4,430,755 + AO356_19755 0.31 +0.2 4,430,756 - AO356_19755 0.31 +0.0 4,430,756 - AO356_19755 0.31 +0.1 4,430,756 - AO356_19755 0.31 +0.5 4,430,756 - AO356_19755 0.31 +0.3 4,430,824 + AO356_19755 0.39 +0.3 4,430,824 + AO356_19755 0.39 +0.4 4,430,824 + AO356_19755 0.39 -0.9 4,430,825 - AO356_19755 0.39 +0.3 4,430,825 - AO356_19755 0.39 +0.2 4,430,944 + AO356_19755 0.53 +0.9 4,430,945 - AO356_19755 0.53 +0.3 4,430,945 - AO356_19755 0.53 -0.0 4,430,945 - AO356_19755 0.53 -0.7 4,430,965 + AO356_19755 0.56 +1.0 4,430,966 - AO356_19755 0.56 -1.8 4,431,151 + AO356_19755 0.77 -0.7 4,431,151 + AO356_19755 0.77 +0.4 4,431,151 + AO356_19755 0.77 -0.7 4,431,151 + AO356_19755 0.77 +0.7 4,431,151 + AO356_19755 0.77 +0.4 4,431,152 - AO356_19755 0.77 +0.3 4,431,152 - AO356_19755 0.77 +0.9 4,431,152 - +1.0
Or see this region's nucleotide sequence