Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00830 and AO356_00835 are separated by 420 nucleotides
AO356_00830: AO356_00830 - hypothetical protein, at 188,228 to 190,279
_00830
AO356_00835: AO356_00835 - hypothetical protein, at 190,700 to 191,749
_00835
Position (kb) 188
189
190
191 Strain fitness (log2 ratio) -2
-1
0
1
2 at 187.310 kb on + strand at 187.311 kb on - strand at 187.319 kb on + strand at 187.320 kb on - strand at 187.389 kb on - strand at 187.492 kb on + strand at 187.492 kb on + strand at 187.493 kb on - strand at 187.575 kb on + strand at 187.575 kb on + strand at 187.576 kb on - strand at 187.576 kb on - strand at 187.576 kb on - strand at 187.576 kb on - strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.579 kb on + strand at 187.580 kb on - strand at 187.580 kb on - strand at 187.580 kb on - strand at 187.580 kb on - strand at 187.638 kb on + strand at 187.638 kb on + strand at 187.639 kb on - strand at 187.748 kb on - strand at 187.767 kb on + strand at 187.767 kb on + strand at 187.768 kb on - strand at 187.768 kb on - strand at 187.771 kb on + strand at 187.772 kb on - strand at 187.772 kb on - strand at 187.772 kb on - strand at 187.772 kb on - strand at 187.774 kb on + strand at 187.775 kb on - strand at 187.776 kb on + strand at 187.776 kb on + strand at 187.776 kb on + strand at 187.777 kb on - strand at 187.777 kb on - strand at 187.810 kb on + strand at 187.877 kb on - strand at 187.984 kb on + strand at 187.997 kb on - strand at 188.000 kb on - strand at 188.000 kb on - strand at 188.004 kb on + strand at 188.091 kb on - strand at 188.096 kb on + strand at 188.206 kb on + strand at 188.207 kb on - strand at 188.287 kb on + strand at 188.287 kb on + strand at 188.287 kb on + strand at 188.288 kb on - strand at 188.288 kb on - strand at 188.288 kb on - strand at 188.288 kb on - strand at 188.319 kb on + strand at 188.332 kb on + strand at 188.413 kb on + strand at 188.414 kb on - strand at 188.430 kb on + strand at 188.515 kb on - strand, within AO356_00830 at 188.588 kb on + strand, within AO356_00830 at 188.588 kb on + strand, within AO356_00830 at 188.589 kb on - strand, within AO356_00830 at 188.589 kb on - strand, within AO356_00830 at 188.589 kb on - strand, within AO356_00830 at 188.668 kb on + strand, within AO356_00830 at 188.668 kb on + strand, within AO356_00830 at 188.669 kb on - strand, within AO356_00830 at 188.722 kb on + strand, within AO356_00830 at 188.809 kb on + strand, within AO356_00830 at 188.853 kb on + strand, within AO356_00830 at 188.854 kb on - strand, within AO356_00830 at 188.922 kb on + strand, within AO356_00830 at 188.923 kb on - strand, within AO356_00830 at 188.923 kb on - strand, within AO356_00830 at 188.923 kb on - strand, within AO356_00830 at 188.931 kb on - strand, within AO356_00830 at 188.972 kb on + strand, within AO356_00830 at 188.973 kb on - strand, within AO356_00830 at 188.973 kb on - strand, within AO356_00830 at 188.973 kb on - strand, within AO356_00830 at 188.989 kb on - strand, within AO356_00830 at 189.097 kb on + strand, within AO356_00830 at 189.098 kb on - strand, within AO356_00830 at 189.380 kb on + strand, within AO356_00830 at 189.380 kb on + strand, within AO356_00830 at 189.380 kb on + strand, within AO356_00830 at 189.380 kb on + strand, within AO356_00830 at 189.380 kb on + strand, within AO356_00830 at 189.380 kb on + strand, within AO356_00830 at 189.381 kb on - strand, within AO356_00830 at 189.381 kb on - strand, within AO356_00830 at 189.381 kb on - strand, within AO356_00830 at 189.381 kb on - strand, within AO356_00830 at 189.381 kb on - strand, within AO356_00830 at 189.381 kb on - strand, within AO356_00830 at 189.384 kb on + strand, within AO356_00830 at 189.393 kb on + strand, within AO356_00830 at 189.393 kb on + strand, within AO356_00830 at 189.394 kb on - strand, within AO356_00830 at 189.394 kb on - strand, within AO356_00830 at 189.398 kb on - strand, within AO356_00830 at 189.529 kb on + strand, within AO356_00830 at 189.530 kb on - strand, within AO356_00830 at 189.530 kb on - strand, within AO356_00830 at 189.530 kb on - strand, within AO356_00830 at 189.721 kb on + strand, within AO356_00830 at 189.722 kb on - strand, within AO356_00830 at 189.722 kb on - strand, within AO356_00830 at 189.823 kb on + strand, within AO356_00830 at 189.823 kb on + strand, within AO356_00830 at 189.823 kb on + strand, within AO356_00830 at 189.824 kb on - strand, within AO356_00830 at 189.824 kb on - strand, within AO356_00830 at 189.824 kb on - strand, within AO356_00830 at 189.824 kb on - strand, within AO356_00830 at 189.824 kb on - strand, within AO356_00830 at 189.824 kb on - strand, within AO356_00830 at 189.828 kb on - strand, within AO356_00830 at 189.868 kb on + strand, within AO356_00830 at 189.888 kb on + strand, within AO356_00830 at 189.942 kb on - strand, within AO356_00830 at 189.969 kb on + strand, within AO356_00830 at 189.969 kb on + strand, within AO356_00830 at 189.970 kb on - strand, within AO356_00830 at 189.970 kb on - strand, within AO356_00830 at 190.051 kb on + strand, within AO356_00830 at 190.051 kb on + strand, within AO356_00830 at 190.051 kb on + strand, within AO356_00830 at 190.052 kb on - strand, within AO356_00830 at 190.052 kb on - strand, within AO356_00830 at 190.052 kb on - strand, within AO356_00830 at 190.084 kb on + strand at 190.085 kb on - strand at 190.088 kb on + strand at 190.088 kb on + strand at 190.088 kb on + strand at 190.088 kb on + strand at 190.088 kb on + strand at 190.088 kb on + strand at 190.088 kb on + strand at 190.089 kb on - strand at 190.089 kb on - strand at 190.089 kb on - strand at 190.089 kb on - strand at 190.089 kb on - strand at 190.089 kb on - strand at 190.243 kb on + strand at 190.244 kb on - strand at 190.263 kb on + strand at 190.263 kb on + strand at 190.264 kb on - strand at 190.264 kb on - strand at 190.271 kb on + strand at 190.271 kb on + strand at 190.309 kb on + strand at 190.310 kb on - strand at 190.337 kb on + strand at 190.337 kb on + strand at 190.337 kb on + strand at 190.337 kb on + strand at 190.338 kb on - strand at 190.355 kb on - strand at 190.424 kb on + strand at 190.425 kb on - strand at 190.440 kb on + strand at 190.440 kb on + strand at 190.460 kb on - strand at 190.460 kb on - strand at 190.556 kb on + strand at 190.556 kb on + strand at 190.556 kb on + strand at 190.557 kb on - strand at 190.557 kb on - strand at 190.557 kb on - strand at 190.557 kb on - strand at 190.587 kb on + strand at 190.587 kb on + strand at 190.588 kb on - strand at 190.617 kb on - strand at 190.739 kb on + strand at 190.740 kb on - strand at 190.740 kb on - strand at 190.800 kb on + strand at 190.801 kb on - strand at 190.801 kb on - strand at 190.801 kb on - strand at 190.801 kb on - strand at 190.803 kb on + strand at 190.804 kb on - strand at 190.807 kb on + strand, within AO356_00835 at 190.808 kb on - strand, within AO356_00835 at 190.808 kb on - strand, within AO356_00835 at 190.808 kb on - strand, within AO356_00835 at 190.867 kb on - strand, within AO356_00835 at 190.867 kb on - strand, within AO356_00835 at 190.873 kb on + strand, within AO356_00835 at 190.879 kb on + strand, within AO356_00835 at 190.879 kb on + strand, within AO356_00835 at 190.963 kb on + strand, within AO356_00835 at 190.964 kb on - strand, within AO356_00835 at 190.977 kb on + strand, within AO356_00835 at 190.977 kb on + strand, within AO356_00835 at 191.115 kb on - strand, within AO356_00835 at 191.115 kb on - strand, within AO356_00835 at 191.115 kb on - strand, within AO356_00835 at 191.115 kb on - strand, within AO356_00835 at 191.176 kb on + strand, within AO356_00835 at 191.176 kb on + strand, within AO356_00835 at 191.177 kb on - strand, within AO356_00835 at 191.224 kb on + strand, within AO356_00835 at 191.225 kb on - strand, within AO356_00835 at 191.225 kb on - strand, within AO356_00835
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 187,310 + +0.9 187,311 - +0.1 187,319 + +0.1 187,320 - -0.3 187,389 - +0.9 187,492 + +0.6 187,492 + -0.2 187,493 - +0.9 187,575 + -0.1 187,575 + -0.4 187,576 - +0.7 187,576 - +0.5 187,576 - -0.1 187,576 - +0.6 187,579 + -0.6 187,579 + -0.1 187,579 + +0.2 187,579 + +0.9 187,579 + +0.3 187,580 - -0.1 187,580 - -0.4 187,580 - +0.1 187,580 - +0.8 187,638 + -0.5 187,638 + +0.7 187,639 - +1.3 187,748 - +0.4 187,767 + -0.5 187,767 + -0.1 187,768 - +1.8 187,768 - +0.4 187,771 + +0.8 187,772 - +0.9 187,772 - -0.1 187,772 - -0.7 187,772 - +0.1 187,774 + +0.3 187,775 - +0.4 187,776 + +0.8 187,776 + +0.8 187,776 + +0.6 187,777 - +0.6 187,777 - -0.7 187,810 + +0.5 187,877 - -0.5 187,984 + -0.5 187,997 - +0.5 188,000 - -0.9 188,000 - -0.4 188,004 + -0.2 188,091 - -0.6 188,096 + -0.4 188,206 + -0.1 188,207 - -0.8 188,287 + +0.0 188,287 + -0.5 188,287 + +0.4 188,288 - +0.7 188,288 - +1.1 188,288 - +0.3 188,288 - +1.1 188,319 + -0.4 188,332 + -0.5 188,413 + +0.2 188,414 - +0.2 188,430 + -0.0 188,515 - AO356_00830 0.14 +0.9 188,588 + AO356_00830 0.18 +0.5 188,588 + AO356_00830 0.18 +0.8 188,589 - AO356_00830 0.18 -0.9 188,589 - AO356_00830 0.18 +0.2 188,589 - AO356_00830 0.18 +0.4 188,668 + AO356_00830 0.21 -1.7 188,668 + AO356_00830 0.21 -0.2 188,669 - AO356_00830 0.21 +0.6 188,722 + AO356_00830 0.24 -0.7 188,809 + AO356_00830 0.28 +0.9 188,853 + AO356_00830 0.30 -0.1 188,854 - AO356_00830 0.31 +0.3 188,922 + AO356_00830 0.34 +0.2 188,923 - AO356_00830 0.34 -0.3 188,923 - AO356_00830 0.34 +0.4 188,923 - AO356_00830 0.34 -0.8 188,931 - AO356_00830 0.34 -0.4 188,972 + AO356_00830 0.36 +0.1 188,973 - AO356_00830 0.36 +0.2 188,973 - AO356_00830 0.36 +0.4 188,973 - AO356_00830 0.36 +1.3 188,989 - AO356_00830 0.37 +0.5 189,097 + AO356_00830 0.42 -0.3 189,098 - AO356_00830 0.42 +0.2 189,380 + AO356_00830 0.56 -0.3 189,380 + AO356_00830 0.56 -0.2 189,380 + AO356_00830 0.56 -0.4 189,380 + AO356_00830 0.56 -0.4 189,380 + AO356_00830 0.56 -0.4 189,380 + AO356_00830 0.56 -0.4 189,381 - AO356_00830 0.56 -0.9 189,381 - AO356_00830 0.56 -0.0 189,381 - AO356_00830 0.56 -0.4 189,381 - AO356_00830 0.56 -0.2 189,381 - AO356_00830 0.56 +0.3 189,381 - AO356_00830 0.56 +0.7 189,384 + AO356_00830 0.56 +0.8 189,393 + AO356_00830 0.57 -1.1 189,393 + AO356_00830 0.57 +1.2 189,394 - AO356_00830 0.57 +0.2 189,394 - AO356_00830 0.57 +1.0 189,398 - AO356_00830 0.57 +0.5 189,529 + AO356_00830 0.63 -1.0 189,530 - AO356_00830 0.63 +0.2 189,530 - AO356_00830 0.63 +0.2 189,530 - AO356_00830 0.63 +0.6 189,721 + AO356_00830 0.73 -0.2 189,722 - AO356_00830 0.73 +0.7 189,722 - AO356_00830 0.73 -1.1 189,823 + AO356_00830 0.78 +0.4 189,823 + AO356_00830 0.78 +0.6 189,823 + AO356_00830 0.78 -0.7 189,824 - AO356_00830 0.78 -0.5 189,824 - AO356_00830 0.78 -0.3 189,824 - AO356_00830 0.78 +0.3 189,824 - AO356_00830 0.78 -0.1 189,824 - AO356_00830 0.78 -0.6 189,824 - AO356_00830 0.78 +0.6 189,828 - AO356_00830 0.78 -1.7 189,868 + AO356_00830 0.80 -0.5 189,888 + AO356_00830 0.81 +0.3 189,942 - AO356_00830 0.84 -0.2 189,969 + AO356_00830 0.85 -0.6 189,969 + AO356_00830 0.85 +1.1 189,970 - AO356_00830 0.85 +0.3 189,970 - AO356_00830 0.85 -0.1 190,051 + AO356_00830 0.89 +0.9 190,051 + AO356_00830 0.89 +0.2 190,051 + AO356_00830 0.89 +0.3 190,052 - AO356_00830 0.89 +0.4 190,052 - AO356_00830 0.89 -1.1 190,052 - AO356_00830 0.89 -1.4 190,084 + -0.3 190,085 - +1.1 190,088 + +0.0 190,088 + +1.6 190,088 + -0.6 190,088 + +1.0 190,088 + +0.9 190,088 + -0.1 190,088 + -0.9 190,089 - -1.2 190,089 - +0.5 190,089 - -0.9 190,089 - -0.2 190,089 - +0.7 190,089 - +1.0 190,243 + -0.2 190,244 - -0.6 190,263 + -0.2 190,263 + -0.1 190,264 - -0.0 190,264 - -0.9 190,271 + +0.3 190,271 + +0.4 190,309 + -0.1 190,310 - +0.7 190,337 + +0.1 190,337 + -0.4 190,337 + -1.8 190,337 + -0.3 190,338 - +0.1 190,355 - -0.2 190,424 + +0.6 190,425 - -0.1 190,440 + +0.4 190,440 + -1.1 190,460 - +0.5 190,460 - -0.3 190,556 + +0.3 190,556 + +0.8 190,556 + -0.5 190,557 - +0.3 190,557 - -0.0 190,557 - -0.8 190,557 - +0.2 190,587 + -0.7 190,587 + +0.9 190,588 - +0.3 190,617 - +0.9 190,739 + -0.8 190,740 - -0.2 190,740 - +0.1 190,800 + -1.4 190,801 - +0.3 190,801 - -0.2 190,801 - -0.7 190,801 - -0.1 190,803 + +0.0 190,804 - +0.4 190,807 + AO356_00835 0.10 +0.3 190,808 - AO356_00835 0.10 +0.3 190,808 - AO356_00835 0.10 +0.4 190,808 - AO356_00835 0.10 +0.1 190,867 - AO356_00835 0.16 +0.2 190,867 - AO356_00835 0.16 -0.5 190,873 + AO356_00835 0.16 +0.5 190,879 + AO356_00835 0.17 +0.6 190,879 + AO356_00835 0.17 +0.5 190,963 + AO356_00835 0.25 +0.8 190,964 - AO356_00835 0.25 +0.3 190,977 + AO356_00835 0.26 +0.4 190,977 + AO356_00835 0.26 -0.5 191,115 - AO356_00835 0.40 +0.1 191,115 - AO356_00835 0.40 +0.2 191,115 - AO356_00835 0.40 +0.7 191,115 - AO356_00835 0.40 -0.2 191,176 + AO356_00835 0.45 -0.2 191,176 + AO356_00835 0.45 -0.2 191,177 - AO356_00835 0.45 -0.1 191,224 + AO356_00835 0.50 -0.5 191,225 - AO356_00835 0.50 +0.7 191,225 - AO356_00835 0.50 +0.9
Or see this region's nucleotide sequence