Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2118 and Ga0059261_2119 are separated by 2 nucleotides Ga0059261_2119 and Ga0059261_2120 are separated by 5 nucleotides Ga0059261_2120 and Ga0059261_2121 overlap by 67 nucleotides
Ga0059261_2118: Ga0059261_2118 - flagellar motor stator protein MotA, at 2,232,475 to 2,233,338
_2118
Ga0059261_2119: Ga0059261_2119 - Flagellar motor protein, at 2,233,341 to 2,234,246
_2119
Ga0059261_2120: Ga0059261_2120 - hypothetical protein, at 2,234,252 to 2,234,434
_2120
Ga0059261_2121: Ga0059261_2121 - hypothetical protein, at 2,234,368 to 2,236,869
_2121
Position (kb)
2234
2235 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2233.332 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.336 kb on + strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.337 kb on - strand at 2233.449 kb on + strand, within Ga0059261_2119 at 2233.449 kb on + strand, within Ga0059261_2119 at 2233.449 kb on + strand at 2233.449 kb on + strand, within Ga0059261_2119 at 2233.450 kb on - strand, within Ga0059261_2119 at 2233.542 kb on + strand, within Ga0059261_2119 at 2233.543 kb on - strand, within Ga0059261_2119 at 2233.543 kb on - strand, within Ga0059261_2119 at 2233.632 kb on + strand, within Ga0059261_2119 at 2233.632 kb on + strand, within Ga0059261_2119 at 2233.632 kb on + strand, within Ga0059261_2119 at 2233.633 kb on - strand, within Ga0059261_2119 at 2233.899 kb on + strand, within Ga0059261_2119 at 2233.899 kb on + strand, within Ga0059261_2119 at 2234.028 kb on + strand, within Ga0059261_2119 at 2234.220 kb on + strand at 2234.251 kb on + strand at 2234.251 kb on + strand at 2234.252 kb on - strand at 2234.252 kb on - strand at 2234.252 kb on - strand at 2234.299 kb on + strand, within Ga0059261_2120 at 2234.299 kb on + strand, within Ga0059261_2120 at 2234.299 kb on + strand, within Ga0059261_2120 at 2234.299 kb on + strand, within Ga0059261_2120 at 2234.299 kb on + strand, within Ga0059261_2120 at 2234.299 kb on + strand, within Ga0059261_2120 at 2234.299 kb on + strand, within Ga0059261_2120 at 2234.299 kb on + strand, within Ga0059261_2120 at 2234.299 kb on + strand, within Ga0059261_2120 at 2234.300 kb on - strand, within Ga0059261_2120 at 2234.300 kb on - strand, within Ga0059261_2120 at 2234.386 kb on + strand at 2234.387 kb on - strand at 2234.387 kb on - strand at 2234.387 kb on - strand at 2234.435 kb on + strand at 2234.435 kb on + strand at 2234.435 kb on + strand at 2234.435 kb on + strand at 2234.435 kb on + strand at 2234.436 kb on - strand at 2234.436 kb on - strand at 2234.436 kb on - strand at 2234.436 kb on - strand at 2234.436 kb on - strand at 2235.272 kb on + strand, within Ga0059261_2121 at 2235.273 kb on - strand, within Ga0059261_2121 at 2235.273 kb on - strand, within Ga0059261_2121
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,233,332 + -0.1 2,233,336 + +0.2 2,233,336 + -0.7 2,233,336 + -0.1 2,233,336 + -0.4 2,233,336 + -0.2 2,233,336 + -1.0 2,233,336 + -0.1 2,233,336 + -2.1 2,233,336 + +0.0 2,233,336 + +1.1 2,233,336 + -0.1 2,233,336 + +1.3 2,233,336 + +0.1 2,233,336 + -0.3 2,233,336 + +0.6 2,233,336 + +1.6 2,233,336 + +1.6 2,233,336 + +0.9 2,233,336 + -1.4 2,233,336 + -0.4 2,233,336 + -0.7 2,233,336 + -0.6 2,233,336 + -0.1 2,233,336 + +0.7 2,233,337 - -0.6 2,233,337 - +0.2 2,233,337 - -0.2 2,233,337 - +0.0 2,233,337 - +0.0 2,233,337 - +0.4 2,233,337 - +0.7 2,233,337 - +1.5 2,233,337 - +0.9 2,233,337 - -0.3 2,233,337 - -1.2 2,233,337 - -0.1 2,233,337 - +0.7 2,233,337 - -0.1 2,233,337 - -0.1 2,233,337 - -0.3 2,233,337 - +0.4 2,233,337 - +0.4 2,233,337 - -0.3 2,233,337 - +0.4 2,233,337 - +0.5 2,233,337 - +0.1 2,233,337 - -0.2 2,233,449 + Ga0059261_2119 0.12 -0.2 2,233,449 + Ga0059261_2119 0.12 +0.3 2,233,449 + -0.1 2,233,449 + Ga0059261_2119 0.12 +1.1 2,233,450 - Ga0059261_2119 0.12 +0.3 2,233,542 + Ga0059261_2119 0.22 -3.1 2,233,543 - Ga0059261_2119 0.22 -0.5 2,233,543 - Ga0059261_2119 0.22 +0.1 2,233,632 + Ga0059261_2119 0.32 -0.3 2,233,632 + Ga0059261_2119 0.32 +0.3 2,233,632 + Ga0059261_2119 0.32 +0.4 2,233,633 - Ga0059261_2119 0.32 -1.1 2,233,899 + Ga0059261_2119 0.62 -0.6 2,233,899 + Ga0059261_2119 0.62 +0.6 2,234,028 + Ga0059261_2119 0.76 +0.6 2,234,220 + -0.2 2,234,251 + -0.2 2,234,251 + +0.4 2,234,252 - +0.8 2,234,252 - +0.8 2,234,252 - -1.3 2,234,299 + Ga0059261_2120 0.26 -1.4 2,234,299 + Ga0059261_2120 0.26 +0.9 2,234,299 + Ga0059261_2120 0.26 -0.6 2,234,299 + Ga0059261_2120 0.26 +0.9 2,234,299 + Ga0059261_2120 0.26 +0.5 2,234,299 + Ga0059261_2120 0.26 +0.7 2,234,299 + Ga0059261_2120 0.26 +0.2 2,234,299 + Ga0059261_2120 0.26 -0.1 2,234,299 + Ga0059261_2120 0.26 -0.3 2,234,300 - Ga0059261_2120 0.26 -0.9 2,234,300 - Ga0059261_2120 0.26 -1.4 2,234,386 + +0.6 2,234,387 - -0.3 2,234,387 - -0.1 2,234,387 - +0.1 2,234,435 + -0.3 2,234,435 + -0.5 2,234,435 + -0.4 2,234,435 + +0.2 2,234,435 + -0.4 2,234,436 - +0.9 2,234,436 - +0.5 2,234,436 - -0.7 2,234,436 - +0.3 2,234,436 - +0.9 2,235,272 + Ga0059261_2121 0.36 -0.2 2,235,273 - Ga0059261_2121 0.36 +0.3 2,235,273 - Ga0059261_2121 0.36 +0.3
Or see this region's nucleotide sequence