Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_24260

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
5,445,787	-		AO356_24255	0.75	-1.5
5,445,827	+		AO356_24255	0.76	-0.5
5,445,828	-		AO356_24255	0.76	-0.8
5,445,869	+		AO356_24255	0.77	+0.3
5,446,027	+		AO356_24255	0.82	-0.3
5,446,329	-		AO356_24255	0.89	-0.5
5,446,337	+		AO356_24255	0.90	-0.4
5,446,338	-		AO356_24255	0.90	-1.2
5,446,338	-		AO356_24255	0.90	-1.4
5,446,874	+				+0.3
5,446,874	+				+0.2
5,446,874	+				+0.9
5,446,874	+				+1.1
5,446,875	-				-0.1
5,446,875	-				+0.7
5,446,911	-				+0.1
5,446,911	-				-0.0
5,446,933	+				+0.5
5,446,933	+				+1.0
5,446,934	-				-1.4
5,446,934	-				-1.1
5,446,947	+				+0.7
5,446,987	+				+1.7
5,446,990	+				+1.0
5,446,990	+				+0.2
5,446,990	+				+0.3
5,446,991	-				-0.3
5,447,282	-				+0.7
5,447,396	-				+0.2
5,447,485	+				-0.7
5,447,485	+				+0.8
5,447,485	+				+0.2
5,447,486	-				-0.8
5,447,486	-				-0.4
5,447,486	-				-0.1
5,447,486	-				+0.2
5,447,489	+				-0.4
5,447,490	-				-1.1
5,447,524	+				+0.2
5,447,525	-				+1.2
5,447,533	+				+1.6
5,448,622	+		AO356_24260	0.18	-0.4
5,448,679	+		AO356_24260	0.19	-0.4
5,448,680	-		AO356_24260	0.19	+0.6
5,449,132	+		AO356_24260	0.23	+0.7
5,449,132	+		AO356_24260	0.23	+0.5
5,449,612	+		AO356_24260	0.28	+0.4
5,449,612	+		AO356_24260	0.28	+0.1
5,449,612	+		AO356_24260	0.28	+1.2
5,449,612	+		AO356_24260	0.28	-0.1
5,449,613	-		AO356_24260	0.28	-1.3
5,449,613	-		AO356_24260	0.28	+0.6
5,449,613	-		AO356_24260	0.28	+0.7
5,449,636	+		AO356_24260	0.28	+1.2
5,449,637	-		AO356_24260	0.28	-0.1
5,449,647	+		AO356_24260	0.29	-0.6
5,449,647	+		AO356_24260	0.29	+0.8
5,449,648	-		AO356_24260	0.29	-0.7
5,449,697	-		AO356_24260	0.29	-1.1
5,449,897	+		AO356_24260	0.31	-0.1
5,450,125	+		AO356_24260	0.33	+0.8
5,450,125	+		AO356_24260	0.33	+0.9
5,450,125	+		AO356_24260	0.33	+0.0
5,450,125	+		AO356_24260	0.33	+1.6
5,450,161	+		AO356_24260	0.34	+0.8
5,450,623	+		AO356_24260	0.38	-0.6
5,450,624	-		AO356_24260	0.38	+0.7
5,450,678	+		AO356_24260	0.39	-1.9
5,450,678	+		AO356_24260	0.39	+0.6
5,450,679	-		AO356_24260	0.39	+0.2
5,450,963	-		AO356_24260	0.41	-1.7
5,451,119	+		AO356_24260	0.43	+0.2
5,451,120	-		AO356_24260	0.43	-1.3
5,451,199	-		AO356_24260	0.44	+0.0
5,451,199	-		AO356_24260	0.44	+1.1
5,451,199	-		AO356_24260	0.44	-0.5
5,451,229	+		AO356_24260	0.44	+1.2
5,451,307	+		AO356_24260	0.45	+0.2
5,451,307	+		AO356_24260	0.45	+0.3
5,451,307	+		AO356_24260	0.45	+0.6
5,451,307	+		AO356_24260	0.45	+0.7
5,451,308	-		AO356_24260	0.45	+0.1
5,451,568	-		AO356_24260	0.47	+0.5
5,451,892	+		AO356_24260	0.51	+0.7
5,451,952	+		AO356_24260	0.51	-0.3
5,451,953	-		AO356_24260	0.51	+1.0
5,452,345	+		AO356_24260	0.55	-1.2
5,452,345	+		AO356_24260	0.55	+0.3
5,452,627	-		AO356_24260	0.58	-0.1
5,452,775	-		AO356_24260	0.59	+0.4
5,452,775	-		AO356_24260	0.59	-0.5
5,452,775	-		AO356_24260	0.59	-0.2
5,452,778	+		AO356_24260	0.59	-0.0
5,452,779	-		AO356_24260	0.59	-1.4
5,452,779	-		AO356_24260	0.59	+0.8
5,452,779	-		AO356_24260	0.59	-0.4
5,452,793	-		AO356_24260	0.59	-1.5
5,452,808	-		AO356_24260	0.60	+0.5
5,452,829	-		AO356_24260	0.60	+1.1
5,452,897	+		AO356_24260	0.60	+1.0
5,453,203	+		AO356_24260	0.63	-0.6
5,453,204	-		AO356_24260	0.63	-0.9
5,453,204	-		AO356_24260	0.63	-0.4
5,453,296	+		AO356_24260	0.64	+0.1
5,453,297	-		AO356_24260	0.64	-0.2
5,454,145	+		AO356_24260	0.73	-0.1
5,454,145	+		AO356_24260	0.73	+0.5
5,454,145	+		AO356_24260	0.73	-1.6
5,454,145	+		AO356_24260	0.73	-1.2
5,454,146	-		AO356_24260	0.73	-0.4
5,454,146	-		AO356_24260	0.73	+0.7
5,454,215	-		AO356_24260	0.73	-0.0
5,454,656	-		AO356_24260	0.78	-1.7
5,455,015	+		AO356_24260	0.81	+0.8
5,455,045	-		AO356_24260	0.81	-0.4
5,455,079	-		AO356_24260	0.82	-0.3
5,455,079	-		AO356_24260	0.82	+0.7
5,455,079	-		AO356_24260	0.82	-1.0
5,455,088	-		AO356_24260	0.82	-0.7
5,455,301	-		AO356_24260	0.84	-0.5
5,455,409	-		AO356_24260	0.85	+0.7
5,455,409	-		AO356_24260	0.85	-0.0
5,455,447	+		AO356_24260	0.85	-0.2
5,455,552	-		AO356_24260	0.86	+0.9
5,455,723	+		AO356_24260	0.88	+1.3
5,455,957	+				+0.8
5,456,125	+				+0.9
5,456,404	+				+0.0
5,456,405	-				+0.4
5,456,461	+				-0.8
5,456,461	+				+0.3
5,456,462	-				+0.1
5,456,849	-				+0.6
5,456,851	+				+0.9
5,456,852	-				-0.3
5,456,917	+				-0.1
5,456,918	-				-0.3
5,456,918	-				-1.0
5,457,037	+				+0.5
5,457,274	-				-0.1
5,457,377	-				+0.2
5,457,874	+				+0.8
5,457,928	+				+0.6