Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_21925

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
4,905,696	+		AO356_21920	0.18	-0.4
4,905,696	+		AO356_21920	0.18	-0.2
4,906,029	+		AO356_21920	0.50	+0.7
4,906,029	+		AO356_21920	0.50	+0.1
4,906,029	+		AO356_21920	0.50	+0.6
4,906,029	+		AO356_21920	0.50	-0.9
4,906,029	+		AO356_21920	0.50	+0.2
4,906,029	+		AO356_21920	0.50	+0.5
4,906,029	+		AO356_21920	0.50	-1.0
4,906,029	+		AO356_21920	0.50	-0.3
4,906,030	-		AO356_21920	0.50	-0.7
4,906,030	-		AO356_21920	0.50	-1.0
4,906,030	-		AO356_21920	0.50	+0.1
4,906,030	-		AO356_21920	0.50	-0.5
4,906,261	+		AO356_21920	0.72	+0.0
4,906,261	+		AO356_21920	0.72	+0.5
4,906,261	+		AO356_21920	0.72	-1.3
4,906,261	+		AO356_21920	0.72	+0.0
4,906,262	-		AO356_21920	0.72	-0.4
4,906,365	+		AO356_21920	0.82	-0.4
4,906,368	+		AO356_21920	0.82	-0.9
4,906,368	+		AO356_21920	0.82	-0.1
4,906,369	-		AO356_21920	0.82	-0.6
4,906,515	+				-0.5
4,906,515	+				+1.0
4,906,516	-				+0.0
4,906,516	-				-1.7
4,906,739	+		AO356_21925	0.24	-3.4
4,906,740	-		AO356_21925	0.24	-1.4
4,906,740	-		AO356_21925	0.24	-1.6
4,906,821	+		AO356_21925	0.44	-1.6
4,906,821	+		AO356_21925	0.44	-1.2
4,906,821	+		AO356_21925	0.44	-0.8
4,906,821	+		AO356_21925	0.44	-0.3
4,906,821	+		AO356_21925	0.44	-2.2
4,906,822	-		AO356_21925	0.44	+0.1
4,906,822	-		AO356_21925	0.44	-1.4
4,906,822	-		AO356_21925	0.44	-1.6
4,906,822	-		AO356_21925	0.44	-2.3
4,906,822	-		AO356_21925	0.44	+0.1
4,906,822	-		AO356_21925	0.44	-1.0
4,906,822	-		AO356_21925	0.44	-2.1
4,906,838	+		AO356_21925	0.48	-0.6
4,906,839	-		AO356_21925	0.48	-2.2
4,906,839	-		AO356_21925	0.48	-1.4
4,906,839	-		AO356_21925	0.48	-0.5
4,906,875	+		AO356_21925	0.57	-1.9
4,906,876	-		AO356_21925	0.57	-1.5
4,906,876	-		AO356_21925	0.57	-0.7
4,906,887	+		AO356_21925	0.60	-0.1
4,906,887	+		AO356_21925	0.60	-0.9
4,906,887	+		AO356_21925	0.60	-2.9
4,906,953	+		AO356_21925	0.76	-0.4
4,906,953	+		AO356_21925	0.76	-1.7
4,906,953	+		AO356_21925	0.76	-1.1
4,906,975	-		AO356_21925	0.81	-2.5
4,906,980	+		AO356_21925	0.82	-1.7
4,906,980	+		AO356_21925	0.82	-0.5
4,906,980	+		AO356_21925	0.82	-0.9
4,906,981	-		AO356_21925	0.82	-2.0
4,906,981	-		AO356_21925	0.82	-1.6
4,907,028	-				-2.4
4,907,039	+				-0.7
4,907,040	-				-1.9
4,907,040	-				-0.9
4,907,069	+				-1.1
4,907,085	-				+0.2
4,907,192	-				+0.9
4,907,193	+				-3.3
4,907,276	-				-0.1
4,907,480	-		AO356_21930	0.11	+0.8
4,907,480	-		AO356_21930	0.11	+1.0
4,907,750	-		AO356_21930	0.34	+0.8
4,907,750	-		AO356_21930	0.34	+1.7
4,907,750	-		AO356_21930	0.34	+0.2
4,907,750	-		AO356_21930	0.34	-0.2
4,907,782	+		AO356_21930	0.36	-0.5
4,907,782	+		AO356_21930	0.36	-0.9
4,907,782	+		AO356_21930	0.36	-0.6
4,907,782	+		AO356_21930	0.36	-0.8
4,907,782	+		AO356_21930	0.36	-0.8
4,907,782	+		AO356_21930	0.36	+0.6
4,907,782	+		AO356_21930	0.36	-0.2
4,907,783	-		AO356_21930	0.36	+0.4
4,907,783	-		AO356_21930	0.36	+0.4
4,907,783	-		AO356_21930	0.36	+0.3
4,907,839	+		AO356_21930	0.41	-0.7
4,907,840	-		AO356_21930	0.41	-0.5
4,907,840	-		AO356_21930	0.41	-0.6
4,907,952	+		AO356_21930	0.50	-0.2
4,907,953	-		AO356_21930	0.50	+0.8
4,907,953	-		AO356_21930	0.50	+1.0