Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16495

Experiment: Doxycycline hyclate 0.0001 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_16490 and AO356_16495 overlap by 4 nucleotidesAO356_16495 and AO356_16500 are separated by 14 nucleotidesAO356_16500 and AO356_16505 overlap by 7 nucleotides AO356_16490: AO356_16490 - glutamyl-tRNA reductase, at 3,726,133 to 3,727,422 _16490 AO356_16495: AO356_16495 - peptide chain release factor 1, at 3,727,419 to 3,728,501 _16495 AO356_16500: AO356_16500 - protein-(glutamine-N5) methyltransferase, release factor-specific, at 3,728,516 to 3,729,346 _16500 AO356_16505: AO356_16505 - molybdopterin-synthase adenylyltransferase, at 3,729,340 to 3,730,095 _16505 Position (kb) 3727 3728 3729Strain fitness (log2 ratio) -1 0 1 2 3 4 5at 3728.513 kb on + strandat 3728.513 kb on + strandat 3728.513 kb on + strandat 3728.513 kb on + strandat 3729.478 kb on + strand, within AO356_16505at 3729.478 kb on + strand, within AO356_16505

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Per-strain Table

Position Strand Gene LocusTag Fraction Doxycycline hyclate 0.0001 mg/ml
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3,728,513 + +0.5
3,728,513 + +2.9
3,728,513 + +5.0
3,728,513 + +4.2
3,729,478 + AO356_16505 0.18 +0.8
3,729,478 + AO356_16505 0.18 -0.6

Or see this region's nucleotide sequence