Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16040

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,625,160	+		AO356_16035	0.76	+0.8
3,625,161	-		AO356_16035	0.76	+0.4
3,625,161	-		AO356_16035	0.76	-1.0
3,625,236	+		AO356_16035	0.79	+1.0
3,625,347	-		AO356_16035	0.82	+0.2
3,625,394	+		AO356_16035	0.84	-0.3
3,625,394	+		AO356_16035	0.84	+0.0
3,625,394	+		AO356_16035	0.84	+1.4
3,625,394	+		AO356_16035	0.84	-0.9
3,625,395	-		AO356_16035	0.84	-0.4
3,625,607	+				-0.7
3,625,796	+				-0.8
3,625,796	+				-1.3
3,625,796	+				-1.0
3,625,865	+				-0.1
3,625,865	+				+1.3
3,625,865	+				+0.1
3,625,865	+				+0.2
3,625,865	+				+0.1
3,625,866	-				+0.4
3,625,866	-				-0.7
3,625,866	-				+0.3
3,625,866	-				+0.7
3,625,892	-				-0.5
3,625,905	-				-0.9
3,625,905	-				-1.1
3,625,929	-				+1.8
3,625,973	+				-2.3
3,626,270	+		AO356_16040	0.29	+0.1
3,626,271	-		AO356_16040	0.29	+0.3
3,626,294	+		AO356_16040	0.32	-0.1
3,626,294	+		AO356_16040	0.32	+0.4
3,626,294	+		AO356_16040	0.32	-0.8
3,626,294	+		AO356_16040	0.32	+1.0
3,626,294	+		AO356_16040	0.32	+0.4
3,626,294	+		AO356_16040	0.32	-0.2
3,626,294	+		AO356_16040	0.32	-0.2
3,626,295	-		AO356_16040	0.32	-0.9
3,626,295	-		AO356_16040	0.32	-0.7
3,626,295	-		AO356_16040	0.32	-1.5
3,626,295	-		AO356_16040	0.32	+0.4
3,626,295	-		AO356_16040	0.32	+0.3
3,626,363	+		AO356_16040	0.38	+1.3
3,626,363	+		AO356_16040	0.38	+1.3
3,626,363	+		AO356_16040	0.38	-0.2
3,626,364	-		AO356_16040	0.39	+0.2
3,626,510	+		AO356_16040	0.53	+0.2
3,626,511	-		AO356_16040	0.53	+0.1
3,626,684	+		AO356_16040	0.70	+0.7
3,626,685	-		AO356_16040	0.70	+0.4
3,626,685	-		AO356_16040	0.70	+0.2
3,626,735	+		AO356_16040	0.75	+0.4
3,626,735	+		AO356_16040	0.75	+0.1
3,626,736	-		AO356_16040	0.75	+0.5
3,627,032	+				-0.5
3,627,032	+				+0.3
3,627,032	+				-0.1
3,627,254	+				+0.4
3,627,255	-				+0.6
3,627,415	+		AO356_16045	0.14	-0.2
3,627,415	+		AO356_16045	0.14	-0.7
3,627,415	+		AO356_16045	0.14	-0.2
3,627,415	+		AO356_16045	0.14	-0.4
3,627,415	+		AO356_16045	0.14	+0.6
3,627,415	+		AO356_16045	0.14	+0.5
3,627,415	+		AO356_16045	0.14	+0.4
3,627,415	+		AO356_16045	0.14	+0.6
3,627,416	-		AO356_16045	0.14	-0.6
3,627,416	-		AO356_16045	0.14	+1.1
3,627,416	-		AO356_16045	0.14	-0.1
3,627,416	-		AO356_16045	0.14	+1.1
3,627,416	-		AO356_16045	0.14	-0.7
3,627,416	-		AO356_16045	0.14	+0.7
3,627,416	-		AO356_16045	0.14	-0.3
3,627,416	-		AO356_16045	0.14	-0.0
3,627,416	-		AO356_16045	0.14	-0.2
3,627,416	-		AO356_16045	0.14	-0.9
3,627,416	-		AO356_16045	0.14	+0.2
3,627,416	-		AO356_16045	0.14	+0.7
3,627,416	-		AO356_16045	0.14	-0.3
3,627,416	-		AO356_16045	0.14	+0.8
3,627,416	-		AO356_16045	0.14	+0.4
3,627,416	-		AO356_16045	0.14	+0.5
3,627,416	-		AO356_16045	0.14	-0.0
3,627,416	-		AO356_16045	0.14	-1.0
3,627,416	-		AO356_16045	0.14	-0.3
3,627,416	-		AO356_16045	0.14	+0.4
3,627,416	-		AO356_16045	0.14	-0.5
3,627,416	-		AO356_16045	0.14	-0.2
3,627,416	-		AO356_16045	0.14	-1.2
3,627,419	+		AO356_16045	0.14	-0.6
3,627,419	+		AO356_16045	0.14	-0.7
3,627,419	+		AO356_16045	0.14	-0.2
3,627,419	+		AO356_16045	0.14	+0.3
3,627,419	+		AO356_16045	0.14	+0.9
3,627,420	-		AO356_16045	0.14	-0.2
3,627,420	-		AO356_16045	0.14	+0.1
3,627,420	-		AO356_16045	0.14	+0.4
3,627,420	-		AO356_16045	0.14	-0.0
3,627,420	-		AO356_16045	0.14	+0.5
3,627,420	-		AO356_16045	0.14	+0.8
3,627,420	-		AO356_16045	0.14	+0.1
3,627,420	-		AO356_16045	0.14	+0.3
3,627,420	-		AO356_16045	0.14	-0.3
3,627,566	-		AO356_16045	0.22	-0.9
3,627,607	+		AO356_16045	0.24	+1.0
3,627,607	+		AO356_16045	0.24	+1.2
3,627,607	+		AO356_16045	0.24	+0.7
3,627,607	+		AO356_16045	0.24	+0.6
3,627,607	+		AO356_16045	0.24	-0.0
3,627,607	+		AO356_16045	0.24	+1.1
3,627,607	+		AO356_16045	0.24	+1.3
3,627,608	-		AO356_16045	0.24	+0.1
3,627,608	-		AO356_16045	0.24	+0.7
3,627,608	-		AO356_16045	0.24	+0.4
3,627,608	-		AO356_16045	0.24	-0.3
3,627,611	-		AO356_16045	0.24	-0.1
3,627,611	-		AO356_16045	0.24	+1.1
3,627,631	+		AO356_16045	0.25	-0.6
3,627,631	+		AO356_16045	0.25	-0.4
3,627,631	+		AO356_16045	0.25	-1.2
3,627,631	+		AO356_16045	0.25	+0.4
3,627,631	+		AO356_16045	0.25	-0.4
3,627,632	-		AO356_16045	0.25	+0.5
3,627,632	-		AO356_16045	0.25	-0.3
3,627,632	-		AO356_16045	0.25	+0.8
3,627,632	-		AO356_16045	0.25	-0.1
3,627,661	+		AO356_16045	0.27	-0.8
3,627,661	+		AO356_16045	0.27	-0.5
3,627,705	+		AO356_16045	0.29	+0.8
3,627,705	+		AO356_16045	0.29	+0.8
3,627,705	+		AO356_16045	0.29	+0.5
3,627,705	+		AO356_16045	0.29	+1.1
3,627,706	-		AO356_16045	0.29	+1.3
3,627,706	-		AO356_16045	0.29	-0.1
3,627,762	+		AO356_16045	0.32	+0.1
3,627,762	+		AO356_16045	0.32	+0.4
3,627,762	+		AO356_16045	0.32	+1.3
3,627,763	-		AO356_16045	0.32	+0.4
3,627,763	-		AO356_16045	0.32	-0.0
3,627,901	+		AO356_16045	0.39	+0.2
3,627,901	+		AO356_16045	0.39	-0.6
3,627,901	+		AO356_16045	0.39	+0.1
3,627,902	-		AO356_16045	0.39	-2.0
3,627,902	-		AO356_16045	0.39	-0.6
3,627,902	-		AO356_16045	0.39	-0.1
3,627,902	-		AO356_16045	0.39	+1.3