Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_15505

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,510,519	+				-1.1
3,510,578	+				+0.5
3,510,807	+		AO356_15500	0.19	-0.4
3,510,807	+		AO356_15500	0.19	+0.4
3,510,808	-		AO356_15500	0.19	-0.5
3,510,954	+		AO356_15500	0.41	+0.1
3,510,955	-		AO356_15500	0.41	+0.4
3,511,002	+		AO356_15500	0.49	+0.6
3,511,002	+		AO356_15500	0.49	+0.7
3,511,002	+		AO356_15500	0.49	+0.5
3,511,002	+		AO356_15500	0.49	+0.3
3,511,002	+		AO356_15500	0.49	+0.3
3,511,002	+		AO356_15500	0.49	-1.3
3,511,003	-		AO356_15500	0.49	-0.2
3,511,003	-		AO356_15500	0.49	-0.3
3,511,155	+		AO356_15500	0.72	-0.4
3,511,155	+		AO356_15500	0.72	+1.3
3,511,155	+		AO356_15500	0.72	-0.2
3,511,155	+		AO356_15500	0.72	-0.4
3,511,156	-		AO356_15500	0.72	-0.0
3,511,156	-		AO356_15500	0.72	-1.4
3,511,156	-		AO356_15500	0.72	+1.0
3,511,165	-		AO356_15500	0.73	-1.1
3,511,192	-		AO356_15500	0.77	+0.0
3,511,253	+		AO356_15500	0.86	-0.5
3,511,309	-				+1.2
3,511,309	-				-1.0
3,511,381	-				-0.7
3,511,410	+				-0.1
3,511,410	+				-1.0
3,511,411	-				+0.6
3,511,421	+				+0.1
3,511,421	+				-0.5
3,511,422	-				-0.2
3,511,456	-				+1.0
3,511,456	-				-0.3
3,511,653	+		AO356_15505	0.18	-0.9
3,511,653	+		AO356_15505	0.18	+0.4
3,511,654	-		AO356_15505	0.18	-0.9
3,511,947	+		AO356_15505	0.57	-0.8
3,511,947	+		AO356_15505	0.57	-0.9
3,511,947	+		AO356_15505	0.57	+0.4
3,511,948	-		AO356_15505	0.57	-0.5
3,512,185	-		AO356_15505	0.89	-0.2
3,512,185	-		AO356_15505	0.89	+1.0
3,512,185	-		AO356_15505	0.89	+0.1
3,512,185	-		AO356_15505	0.89	+0.4
3,512,220	+				-0.4
3,512,220	+				-0.0
3,512,220	+				-0.1
3,512,221	-				+0.4
3,512,308	+				-0.4
3,512,309	-				+0.1
3,512,337	+				+0.1
3,512,337	+				-0.2
3,512,337	+				+0.0
3,512,338	-				+0.8
3,512,338	-				-0.1
3,512,370	+				-0.3
3,512,370	+				-1.3
3,512,370	+				+0.4
3,512,370	+				-0.1
3,512,370	+				+0.5
3,512,370	+				+1.4
3,512,370	+				-1.5
3,512,370	+				+0.7
3,512,371	-				-0.5
3,512,371	-				+0.2
3,512,371	-				-0.7
3,512,371	-				+0.1
3,512,371	-				-0.5
3,512,435	+				+0.8
3,512,435	+				-0.9
3,512,436	-				+0.6
3,512,438	+				+0.4
3,512,439	-				-0.6
3,512,439	-				-1.6
3,512,439	-				+0.7
3,512,439	-				-0.1
3,512,439	-				-0.6
3,512,456	+		AO356_15510	0.12	-0.8
3,512,456	+		AO356_15510	0.12	+0.1
3,512,456	+		AO356_15510	0.12	+0.9
3,512,457	-		AO356_15510	0.13	+0.3
3,512,457	-		AO356_15510	0.13	+0.2
3,512,474	+		AO356_15510	0.16	+0.3
3,512,475	-		AO356_15510	0.16	+0.1
3,512,475	-		AO356_15510	0.16	+0.4
3,512,525	+		AO356_15510	0.27	+0.6
3,512,525	+		AO356_15510	0.27	+0.9
3,512,525	+		AO356_15510	0.27	+0.9
3,512,525	+		AO356_15510	0.27	-0.7
3,512,526	-		AO356_15510	0.27	+1.3
3,512,526	-		AO356_15510	0.27	-0.1
3,512,615	+		AO356_15510	0.46	-1.1
3,512,615	+		AO356_15510	0.46	+0.1
3,512,615	+		AO356_15510	0.46	+0.3
3,512,615	+		AO356_15510	0.46	+0.0
3,512,616	-		AO356_15510	0.46	+0.9
3,512,616	-		AO356_15510	0.46	-0.5
3,512,837	+				+0.3
3,512,837	+				+0.6
3,512,837	+				-1.3
3,512,837	+				-0.2
3,512,837	+				+0.3
3,512,838	-				+0.7
3,512,838	-				+0.8
3,512,838	-				+0.3
3,512,838	-				+0.7
3,512,838	-				+0.9
3,512,838	-				-0.5
3,512,838	-				+1.1
3,513,208	+		AO356_15515	0.51	-1.0
3,513,208	+		AO356_15515	0.51	-0.9
3,513,209	-		AO356_15515	0.51	+0.9
3,513,209	-		AO356_15515	0.51	-0.2