Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_15055

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,405,726	+		AO356_15050	0.29	+0.9
3,405,726	+		AO356_15050	0.29	+0.7
3,405,727	-		AO356_15050	0.29	-1.1
3,405,727	-		AO356_15050	0.29	+0.3
3,405,727	-		AO356_15050	0.29	+0.3
3,406,360	+				+1.8
3,406,360	+				-1.3
3,406,383	-				-1.1
3,406,383	-				+0.1
3,406,383	-				-0.6
3,406,383	-				+0.4
3,406,397	+				-0.1
3,406,398	-				+0.2
3,406,425	+				-1.0
3,406,425	+				+0.3
3,406,426	-				-0.1
3,406,426	-				+0.2
3,406,426	-				-0.5
3,406,426	-				-0.2
3,406,442	+				-0.3
3,406,442	+				+0.2
3,406,443	-				-1.1
3,406,443	-				-0.5
3,406,539	+				+0.1
3,406,539	+				-0.5
3,406,540	-				+0.5
3,406,667	+		AO356_15055	0.15	+1.3
3,406,667	+		AO356_15055	0.15	-0.5
3,406,668	-		AO356_15055	0.15	+0.5
3,406,668	-		AO356_15055	0.15	-0.1
3,406,671	+		AO356_15055	0.15	-1.5
3,406,671	+		AO356_15055	0.15	-0.5
3,406,671	+		AO356_15055	0.15	-0.3
3,406,671	+		AO356_15055	0.15	+0.3
3,406,672	-		AO356_15055	0.15	-1.0
3,406,672	-		AO356_15055	0.15	+1.4
3,406,672	-		AO356_15055	0.15	+0.5
3,406,672	-		AO356_15055	0.15	+0.1
3,406,672	-		AO356_15055	0.15	+1.3
3,406,672	-		AO356_15055	0.15	+0.3
3,406,677	+		AO356_15055	0.16	+0.7
3,406,677	+		AO356_15055	0.16	+1.7
3,406,677	+		AO356_15055	0.16	+0.5
3,406,677	+		AO356_15055	0.16	+0.5
3,406,678	-		AO356_15055	0.16	+0.4
3,406,678	-		AO356_15055	0.16	+0.6
3,406,678	-		AO356_15055	0.16	-0.8
3,406,678	-		AO356_15055	0.16	-0.4
3,406,678	-		AO356_15055	0.16	+0.3
3,407,211	+		AO356_15055	0.68	-1.0
3,407,211	+		AO356_15055	0.68	+1.0
3,407,211	+		AO356_15055	0.68	+1.7
3,407,211	+		AO356_15055	0.68	-0.6
3,407,335	-		AO356_15055	0.80	+0.8
3,407,382	+		AO356_15055	0.84	+0.3
3,407,383	-		AO356_15055	0.84	+1.3
3,407,383	-		AO356_15055	0.84	-0.1
3,407,383	-		AO356_15055	0.84	-0.4
3,407,383	-		AO356_15055	0.84	-1.2
3,407,406	-		AO356_15055	0.86	-0.5
3,407,411	+		AO356_15055	0.87	+1.0
3,407,499	+				+0.8
3,407,500	-				-0.1
3,407,545	-				-0.5
3,407,786	-		AO356_15060	0.38	-1.2
3,407,786	-		AO356_15060	0.38	-0.2
3,407,786	-		AO356_15060	0.38	-0.2
3,407,786	-		AO356_15060	0.38	-0.0
3,407,851	+		AO356_15060	0.48	+0.5
3,407,851	+		AO356_15060	0.48	+0.9
3,407,852	-		AO356_15060	0.48	+0.3
3,407,852	-		AO356_15060	0.48	+0.7
3,407,852	-		AO356_15060	0.48	+0.9
3,407,860	+		AO356_15060	0.49	+0.1
3,407,860	+		AO356_15060	0.49	+0.3
3,407,861	-		AO356_15060	0.49	+0.3
3,407,861	-		AO356_15060	0.49	+0.1
3,407,861	-		AO356_15060	0.49	+0.1
3,407,932	+		AO356_15060	0.60	-1.7
3,407,933	-		AO356_15060	0.60	+0.3
3,407,933	-		AO356_15060	0.60	+0.5
3,407,933	-		AO356_15060	0.60	+0.3
3,407,933	-		AO356_15060	0.60	-0.0
3,407,953	+		AO356_15060	0.63	-0.4
3,407,954	-		AO356_15060	0.63	+0.6
3,408,034	+		AO356_15060	0.76	+0.4
3,408,035	-		AO356_15060	0.76	+0.8
3,408,035	-		AO356_15060	0.76	-0.9
3,408,061	+		AO356_15060	0.80	-0.6
3,408,062	-		AO356_15060	0.80	+1.5
3,408,062	-		AO356_15060	0.80	+0.3
3,408,170	-				+0.2
3,408,170	-				+0.8
3,408,198	-				+0.4
3,408,268	+		AO356_15065	0.13	-0.9
3,408,268	+		AO356_15065	0.13	+0.3
3,408,268	+		AO356_15065	0.13	+0.4
3,408,268	+		AO356_15065	0.13	-0.5
3,408,269	-		AO356_15065	0.14	+1.8
3,408,269	-		AO356_15065	0.14	-0.1
3,408,313	+		AO356_15065	0.24	-2.5
3,408,313	+		AO356_15065	0.24	+0.4
3,408,313	+		AO356_15065	0.24	-1.0
3,408,313	+		AO356_15065	0.24	-0.2
3,408,313	+		AO356_15065	0.24	-0.6
3,408,313	+		AO356_15065	0.24	-0.1
3,408,313	+		AO356_15065	0.24	-0.4
3,408,314	-		AO356_15065	0.24	+0.6
3,408,314	-		AO356_15065	0.24	+0.5
3,408,314	-		AO356_15065	0.24	+1.5
3,408,314	-		AO356_15065	0.24	+0.6
3,408,314	-		AO356_15065	0.24	+0.4
3,408,433	+		AO356_15065	0.52	-0.1
3,408,433	+		AO356_15065	0.52	+0.3