Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_14005

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
3,180,052	-		AO356_14000	0.31	-0.1
3,180,057	+		AO356_14000	0.31	-0.3
3,180,058	-		AO356_14000	0.31	-0.1
3,180,096	+		AO356_14000	0.34	-0.4
3,180,096	+		AO356_14000	0.34	+0.9
3,180,097	-		AO356_14000	0.35	+1.0
3,180,097	-		AO356_14000	0.35	+0.6
3,180,097	-		AO356_14000	0.35	-1.4
3,180,097	-		AO356_14000	0.35	-0.9
3,180,097	-		AO356_14000	0.35	+0.2
3,180,112	-		AO356_14000	0.36	+1.4
3,180,208	-		AO356_14000	0.44	-0.9
3,180,252	+		AO356_14000	0.47	-0.1
3,180,252	+		AO356_14000	0.47	-0.3
3,180,253	-		AO356_14000	0.48	+0.5
3,180,253	-		AO356_14000	0.48	+0.9
3,180,253	-		AO356_14000	0.48	-0.0
3,180,402	-		AO356_14000	0.60	-0.0
3,180,402	-		AO356_14000	0.60	+0.2
3,180,588	+		AO356_14000	0.76	+1.2
3,180,588	+		AO356_14000	0.76	-0.4
3,180,588	+		AO356_14000	0.76	-0.6
3,180,588	+		AO356_14000	0.76	-1.3
3,180,589	-		AO356_14000	0.76	+1.0
3,180,589	-		AO356_14000	0.76	+0.5
3,180,589	-		AO356_14000	0.76	+0.4
3,180,589	-		AO356_14000	0.76	+0.6
3,180,589	-		AO356_14000	0.76	-0.5
3,180,711	+		AO356_14000	0.86	-0.7
3,180,711	+		AO356_14000	0.86	+0.2
3,180,712	-		AO356_14000	0.86	-0.4
3,180,712	-		AO356_14000	0.86	-0.0
3,180,887	+				-1.3
3,180,951	+				+1.4
3,180,985	+		AO356_14005	0.16	+0.1
3,180,985	+		AO356_14005	0.16	+0.1
3,180,985	+		AO356_14005	0.16	-0.2
3,180,986	-		AO356_14005	0.17	+0.0
3,180,986	-		AO356_14005	0.17	-0.6
3,180,986	-		AO356_14005	0.17	+0.0
3,180,986	-		AO356_14005	0.17	+0.6
3,180,986	-		AO356_14005	0.17	-0.4
3,180,986	-		AO356_14005	0.17	+0.8
3,181,036	+		AO356_14005	0.40	-1.4
3,181,036	+		AO356_14005	0.40	-0.8
3,181,036	+		AO356_14005	0.40	+0.3
3,181,037	-		AO356_14005	0.41	+0.6
3,181,037	-		AO356_14005	0.41	+0.4
3,181,038	+		AO356_14005	0.41	-0.1
3,181,038	+		AO356_14005	0.41	+0.3
3,181,039	-		AO356_14005	0.42	-0.5
3,181,062	+		AO356_14005	0.53	-0.0
3,181,099	+		AO356_14005	0.70	-1.4
3,181,100	-		AO356_14005	0.70	+0.7
3,181,111	-		AO356_14005	0.76	-0.3
3,181,111	-		AO356_14005	0.76	+1.5
3,181,135	+		AO356_14005	0.87	-0.2
3,181,189	+				+0.5
3,181,261	+				-1.2
3,181,299	+				+0.6
3,181,300	-				+0.2
3,181,316	+				+0.5
3,181,381	+				-0.4
3,181,381	+				+0.5
3,181,399	+				+0.2
3,181,476	-				+0.8
3,181,550	+		AO356_14010	0.13	+1.5
3,181,550	+		AO356_14010	0.13	+0.2
3,181,550	+		AO356_14010	0.13	-1.8
3,181,619	+		AO356_14010	0.25	+1.4
3,181,619	+		AO356_14010	0.25	-0.0
3,181,619	+		AO356_14010	0.25	-0.2
3,181,619	+		AO356_14010	0.25	-0.0
3,181,619	+		AO356_14010	0.25	+0.6
3,181,620	-		AO356_14010	0.25	+0.4
3,181,620	-		AO356_14010	0.25	+0.4
3,181,620	-		AO356_14010	0.25	-0.4
3,181,620	-		AO356_14010	0.25	+0.2
3,181,664	+		AO356_14010	0.33	+1.1
3,181,664	+		AO356_14010	0.33	+0.6
3,181,665	-		AO356_14010	0.33	+0.1
3,181,665	-		AO356_14010	0.33	+0.9
3,181,721	+		AO356_14010	0.43	-0.7
3,181,721	+		AO356_14010	0.43	+1.4
3,181,722	-		AO356_14010	0.43	-1.0
3,181,722	-		AO356_14010	0.43	+0.9
3,181,722	-		AO356_14010	0.43	+1.1
3,181,722	-		AO356_14010	0.43	+0.5
3,181,722	-		AO356_14010	0.43	+0.7
3,182,080	+				-0.4
3,182,080	+				-1.0
3,182,081	-				+0.1
3,182,161	-				-0.2
3,182,161	-				+1.4
3,182,161	-				+1.6
3,182,161	-				+0.1
3,182,161	-				+0.9