Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12465

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,845,831	+		AO356_12455	0.24	+1.5
2,845,855	+		AO356_12455	0.27	-0.9
2,845,870	+		AO356_12455	0.29	+0.0
2,845,870	+		AO356_12455	0.29	-0.1
2,845,871	-		AO356_12455	0.29	-1.5
2,845,871	-		AO356_12455	0.29	-1.3
2,845,871	-		AO356_12455	0.29	-0.1
2,845,871	-		AO356_12455	0.29	+1.4
2,845,871	-		AO356_12455	0.29	-0.3
2,845,871	-		AO356_12455	0.29	+0.2
2,845,871	-		AO356_12455	0.29	+0.5
2,845,871	-		AO356_12455	0.29	+0.1
2,845,871	-		AO356_12455	0.29	-0.7
2,845,987	+		AO356_12455	0.46	+0.3
2,845,987	+		AO356_12455	0.46	-1.3
2,845,987	+		AO356_12455	0.46	+0.8
2,845,987	+		AO356_12455	0.46	-1.7
2,845,987	+		AO356_12455	0.46	-0.0
2,845,987	+		AO356_12455	0.46	+1.0
2,845,987	+		AO356_12455	0.46	+0.0
2,845,987	+		AO356_12455	0.46	-0.1
2,845,987	+		AO356_12455	0.46	+0.0
2,845,987	+		AO356_12455	0.46	-1.1
2,845,987	+		AO356_12455	0.46	+1.1
2,845,987	+		AO356_12455	0.46	-0.4
2,845,988	-		AO356_12455	0.46	-0.0
2,845,988	-		AO356_12455	0.46	+1.1
2,845,988	-		AO356_12455	0.46	-0.2
2,845,988	-		AO356_12455	0.46	+1.8
2,845,988	-		AO356_12455	0.46	-0.2
2,845,988	-		AO356_12455	0.46	+0.2
2,845,988	-		AO356_12455	0.46	+1.1
2,845,988	-		AO356_12455	0.46	+0.2
2,845,988	-		AO356_12455	0.46	-0.2
2,846,131	+		AO356_12455	0.66	-0.3
2,846,131	+		AO356_12455	0.66	-1.5
2,846,131	+		AO356_12455	0.66	-0.7
2,846,131	+		AO356_12455	0.66	-0.1
2,846,131	+		AO356_12455	0.66	+1.1
2,846,132	-		AO356_12455	0.66	-0.9
2,846,132	-		AO356_12455	0.66	+0.4
2,846,132	-		AO356_12455	0.66	-0.0
2,846,132	-		AO356_12455	0.66	-1.2
2,846,132	-		AO356_12455	0.66	+0.3
2,846,132	-		AO356_12455	0.66	-2.0
2,846,265	+		AO356_12455	0.84	+1.0
2,846,265	+		AO356_12455	0.84	+0.1
2,846,265	+		AO356_12455	0.84	+0.5
2,846,266	-		AO356_12455	0.85	-0.3
2,846,266	-		AO356_12455	0.85	+0.7
2,846,266	-		AO356_12455	0.85	-0.0
2,846,350	-				+0.0
2,846,429	+		AO356_12460	0.21	+0.1
2,846,429	+		AO356_12460	0.21	-0.0
2,846,429	+		AO356_12460	0.21	-0.1
2,846,429	+		AO356_12460	0.21	-0.8
2,846,430	-		AO356_12460	0.22	-1.5
2,846,430	-		AO356_12460	0.22	-0.7
2,846,430	-		AO356_12460	0.22	+1.3
2,846,447	+		AO356_12460	0.29	-0.8
2,846,447	+		AO356_12460	0.29	+0.5
2,846,447	+		AO356_12460	0.29	-0.1
2,846,448	-		AO356_12460	0.29	+0.4
2,846,448	-		AO356_12460	0.29	-1.2
2,846,602	+				-2.2
2,846,603	-				+0.3
2,846,663	-				+0.1
2,846,663	-				+0.1
2,846,663	-				-1.6
2,846,690	+				+0.0
2,846,691	-				+0.1
2,846,691	-				+0.9
2,846,691	-				+0.3
2,846,691	-				-1.6
2,846,704	-				-0.0
2,846,705	+				-0.1
2,846,705	+				-0.3
2,846,705	+				-0.9
2,846,705	+				-0.1
2,846,706	-				+0.1
2,846,706	-				+0.6
2,846,706	-				+1.2
2,846,706	-				-0.2
2,846,719	+				-0.0
2,846,719	+				+2.1
2,846,719	+				-0.1
2,846,720	-				-1.1
2,846,735	+				-0.1
2,846,735	+				+0.5
2,846,736	-				+0.1
2,846,736	-				-0.9
2,846,737	+				+0.5
2,846,737	+				+1.0
2,846,737	+				+0.6
2,846,737	+				+1.0
2,846,738	-				-0.9
2,846,738	-				-0.0
2,846,739	+				-0.4
2,846,739	+				+0.3
2,846,739	+				+0.1
2,846,739	+				-0.2
2,846,740	-				-0.5
2,846,740	-				-0.3
2,846,752	+				+0.7
2,846,753	-				-0.6
2,846,753	-				-0.5
2,846,797	+				-1.7
2,846,821	+		AO356_12465	0.12	+1.0
2,846,821	+		AO356_12465	0.12	-0.6
2,846,821	+		AO356_12465	0.12	-1.3
2,846,848	+		AO356_12465	0.16	-0.7
2,846,848	+		AO356_12465	0.16	-0.4
2,846,848	+		AO356_12465	0.16	-0.1
2,846,849	-		AO356_12465	0.16	+0.8
2,846,849	-		AO356_12465	0.16	+0.5
2,846,849	-		AO356_12465	0.16	+0.7
2,846,850	+		AO356_12465	0.16	+0.2
2,846,850	+		AO356_12465	0.16	+0.4
2,846,850	+		AO356_12465	0.16	+1.4
2,846,850	+		AO356_12465	0.16	-0.2
2,846,851	-		AO356_12465	0.17	-0.7
2,846,851	-		AO356_12465	0.17	+0.7
2,846,851	-		AO356_12465	0.17	+1.1
2,846,882	+		AO356_12465	0.22	+1.1
2,846,882	+		AO356_12465	0.22	-0.9
2,846,883	-		AO356_12465	0.22	+0.3
2,846,900	+		AO356_12465	0.24	-0.8
2,846,903	+		AO356_12465	0.25	-0.5
2,846,903	+		AO356_12465	0.25	-0.6
2,846,903	+		AO356_12465	0.25	+0.6
2,846,903	+		AO356_12465	0.25	+0.4
2,846,903	+		AO356_12465	0.25	+0.7
2,846,903	+		AO356_12465	0.25	+1.0
2,846,903	+		AO356_12465	0.25	+0.2
2,846,904	-		AO356_12465	0.25	-0.9
2,846,904	-		AO356_12465	0.25	-1.0
2,846,904	-		AO356_12465	0.25	-1.3
2,846,904	-		AO356_12465	0.25	+3.0
2,846,904	-		AO356_12465	0.25	+0.2
2,846,904	-		AO356_12465	0.25	-1.0
2,846,904	-		AO356_12465	0.25	-0.5
2,846,904	-		AO356_12465	0.25	+0.3
2,846,904	-		AO356_12465	0.25	-0.6
2,846,911	+		AO356_12465	0.26	-0.0
2,846,912	-		AO356_12465	0.26	+0.7
2,846,912	-		AO356_12465	0.26	+0.8
2,846,912	-		AO356_12465	0.26	-0.5
2,846,912	-		AO356_12465	0.26	+0.2
2,846,936	+		AO356_12465	0.30	-0.1
2,846,936	+		AO356_12465	0.30	+0.0
2,846,936	+		AO356_12465	0.30	-1.3
2,846,936	+		AO356_12465	0.30	+0.5
2,846,936	+		AO356_12465	0.30	-0.8
2,846,936	+		AO356_12465	0.30	-0.2
2,846,936	+		AO356_12465	0.30	+0.3
2,846,936	+		AO356_12465	0.30	-0.7
2,846,936	+		AO356_12465	0.30	+0.1
2,846,936	+		AO356_12465	0.30	+0.1
2,846,936	+		AO356_12465	0.30	+0.4
2,846,936	+		AO356_12465	0.30	+0.1
2,846,936	+		AO356_12465	0.30	-0.3
2,846,937	-		AO356_12465	0.30	-0.7
2,846,937	-		AO356_12465	0.30	-0.1
2,846,937	-		AO356_12465	0.30	-0.3
2,846,937	-		AO356_12465	0.30	-0.1
2,846,937	-		AO356_12465	0.30	-0.0
2,846,937	-		AO356_12465	0.30	-0.4
2,846,937	-		AO356_12465	0.30	-1.8
2,846,937	-		AO356_12465	0.30	+0.3
2,846,937	-		AO356_12465	0.30	+0.8
2,846,937	-		AO356_12465	0.30	-0.3
2,846,992	+		AO356_12465	0.39	-0.1
2,846,992	+		AO356_12465	0.39	-0.0
2,846,992	+		AO356_12465	0.39	-0.7
2,846,992	+		AO356_12465	0.39	+1.6
2,846,992	+		AO356_12465	0.39	-0.3
2,846,993	-		AO356_12465	0.39	-0.7
2,846,993	-		AO356_12465	0.39	-0.5
2,846,993	-		AO356_12465	0.39	+1.6
2,846,993	-		AO356_12465	0.39	-0.9
2,847,329	+				+0.4
2,847,329	+				-0.5
2,847,329	+				+0.2
2,847,329	+				-0.5
2,847,329	+				+0.0
2,847,329	+				+1.1
2,847,329	+				+1.4
2,847,329	+				+0.4
2,847,329	+				+0.6
2,847,329	+				-0.3
2,847,329	+				-1.0
2,847,329	+				-1.7
2,847,329	+				+0.2
2,847,329	+				+0.2
2,847,329	+				+0.6
2,847,329	+				-0.4
2,847,330	-				+0.4
2,847,330	-				+0.7
2,847,330	-				+0.2
2,847,330	-				+0.2
2,847,330	-				-0.7
2,847,330	-				-0.1
2,847,330	-				-0.9
2,847,330	-				+0.3
2,847,330	-				+1.9
2,847,330	-				-1.3
2,847,330	-				-0.7
2,847,330	-				+0.3
2,847,333	+				+0.8
2,847,333	+				-0.3
2,847,333	+				-1.1
2,847,333	+				+2.0
2,847,333	+				+0.2
2,847,333	+				+0.4
2,847,333	+				+0.5
2,847,333	+				+0.8
2,847,333	+				+0.4
2,847,333	+				+0.5
2,847,333	+				-0.4
2,847,333	+				+0.1
2,847,333	+				+0.3
2,847,333	+				+0.3
2,847,333	+				+0.2
2,847,333	+				+0.5
2,847,333	+				+0.2
2,847,333	+				+0.3
2,847,333	+				+0.5
2,847,333	+				+1.1
2,847,333	+				-0.3
2,847,333	+				+0.8
2,847,333	+				-0.6
2,847,333	+				+1.3
2,847,333	+				-0.7
2,847,333	+				-1.4
2,847,334	-				-0.6
2,847,334	-				+1.5
2,847,334	-				-0.4
2,847,334	-				-0.8
2,847,334	-				+0.0
2,847,334	-				-0.3
2,847,334	-				-1.5
2,847,334	-				-2.2
2,847,334	-				+0.3
2,847,334	-				-0.1
2,847,334	-				+1.5
2,847,334	-				+0.9
2,847,334	-				-1.2
2,847,334	-				+1.3
2,847,334	-				+1.2
2,847,334	-				+0.0
2,847,334	-				+1.2
2,847,334	-				+1.0
2,847,334	-				-1.0
2,847,334	-				-0.3
2,847,334	-				+0.6
2,847,334	-				+0.4
2,847,334	-				+1.0
2,847,335	+				-0.2
2,847,335	+				-0.2
2,847,335	+				+0.5
2,847,335	+				+0.6
2,847,335	+				+0.4
2,847,335	+				+0.1
2,847,335	+				+0.4
2,847,335	+				-0.0
2,847,335	+				+0.8
2,847,335	+				+1.0
2,847,335	+				+1.4
2,847,335	+				-0.7
2,847,335	+				+0.2
2,847,335	+				+0.5
2,847,335	+				-2.0
2,847,335	+				+1.5
2,847,335	+				+0.1
2,847,335	+				+0.8
2,847,335	+				+0.7
2,847,335	+				+0.5
2,847,335	+				+0.8
2,847,335	+				+1.1
2,847,335	+				+0.9
2,847,335	+				-0.3
2,847,335	+				+0.0
2,847,335	+				-0.2
2,847,336	-				+0.8
2,847,336	-				+0.1
2,847,336	-				+0.9
2,847,336	-				-0.1
2,847,336	-				-0.6
2,847,336	-				+0.2
2,847,336	-				+0.5
2,847,336	-				+0.2
2,847,336	-				+0.1
2,847,336	-				+0.7
2,847,336	-				+0.9
2,847,336	-				-0.8
2,847,336	-				+1.0
2,847,336	-				+0.2
2,847,336	-				+0.3
2,847,336	-				-0.5
2,847,336	-				+0.8
2,847,336	-				-0.2
2,847,336	-				+1.0
2,847,336	-				+0.0
2,847,336	-				-0.3
2,847,336	-				+0.1
2,847,371	+				+0.1
2,847,371	+				+0.8
2,847,372	-				+0.2
2,847,511	+				+0.7
2,847,512	-				-0.9
2,847,517	+				-0.7
2,847,517	+				+0.7
2,847,517	+				-1.0
2,847,517	+				-0.6
2,847,517	+				+0.1
2,847,518	-				-1.3
2,847,518	-				+0.6
2,847,518	-				+0.8
2,847,519	+				+0.4
2,847,519	+				-0.3
2,847,519	+				+0.2
2,847,519	+				+0.8
2,847,519	+				+0.9
2,847,519	+				-1.3
2,847,519	+				-1.2
2,847,519	+				-0.1
2,847,519	+				+0.5
2,847,519	+				-0.0
2,847,519	+				+0.8
2,847,520	-				+0.8
2,847,520	-				+0.3
2,847,520	-				+0.1
2,847,520	-				+0.8
2,847,520	-				+0.2
2,847,520	-				+0.0
2,847,641	+				+0.4
2,847,641	+				-0.5
2,847,642	-				-0.4
2,847,642	-				-0.1
2,847,642	-				+1.0
2,847,642	-				+0.1
2,847,792	+		AO356_12470	0.21	+0.0
2,847,792	+		AO356_12470	0.21	-1.0
2,847,792	+		AO356_12470	0.21	-0.3
2,847,792	+		AO356_12470	0.21	-1.9
2,847,792	+		AO356_12470	0.21	-0.1
2,847,792	+		AO356_12470	0.21	-0.9
2,847,792	+		AO356_12470	0.21	-1.5
2,847,792	+		AO356_12470	0.21	-0.9
2,847,793	-		AO356_12470	0.21	-1.1
2,847,793	-		AO356_12470	0.21	+0.0
2,847,793	-		AO356_12470	0.21	-0.4
2,847,947	+		AO356_12470	0.41	-1.2
2,847,948	-		AO356_12470	0.42	-0.3
2,847,956	+		AO356_12470	0.43	+0.5
2,847,957	-		AO356_12470	0.43	+0.8
2,848,103	+		AO356_12470	0.62	-0.4
2,848,103	+		AO356_12470	0.62	-0.5
2,848,103	+		AO356_12470	0.62	-0.0
2,848,103	+		AO356_12470	0.62	-0.6
2,848,175	+		AO356_12470	0.72	-0.0
2,848,175	+		AO356_12470	0.72	+0.1
2,848,175	+		AO356_12470	0.72	-0.3
2,848,175	+		AO356_12470	0.72	-0.4
2,848,175	+		AO356_12470	0.72	-0.4
2,848,175	+		AO356_12470	0.72	-0.1
2,848,175	+		AO356_12470	0.72	-1.2
2,848,176	-		AO356_12470	0.72	-0.1
2,848,176	-		AO356_12470	0.72	-0.3
2,848,176	-		AO356_12470	0.72	-1.1
2,848,227	-		AO356_12470	0.79	-1.8
2,848,227	-		AO356_12470	0.79	+0.0