Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10975

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,493,040	+		AO356_10965	0.80	-0.1
2,493,040	+		AO356_10965	0.80	-1.6
2,493,040	+		AO356_10965	0.80	+1.0
2,493,040	+		AO356_10965	0.80	+0.3
2,493,041	-		AO356_10965	0.80	+0.7
2,493,041	-		AO356_10965	0.80	+0.2
2,493,055	+		AO356_10965	0.82	-0.4
2,493,080	+		AO356_10965	0.84	+0.1
2,493,081	-		AO356_10965	0.84	-0.2
2,493,081	-		AO356_10965	0.84	+0.2
2,493,081	-		AO356_10965	0.84	+0.5
2,493,097	+		AO356_10965	0.85	-0.5
2,493,097	+		AO356_10965	0.85	+0.8
2,493,097	+		AO356_10965	0.85	-0.1
2,493,097	+		AO356_10965	0.85	+0.4
2,493,097	+		AO356_10965	0.85	-0.1
2,493,097	+		AO356_10965	0.85	+1.0
2,493,097	+		AO356_10965	0.85	+1.0
2,493,097	+		AO356_10965	0.85	-0.5
2,493,098	-		AO356_10965	0.86	-0.2
2,493,098	-		AO356_10965	0.86	-0.1
2,493,098	-		AO356_10965	0.86	-0.5
2,493,098	-		AO356_10965	0.86	-0.1
2,493,098	-		AO356_10965	0.86	+0.8
2,493,098	-		AO356_10965	0.86	+0.7
2,493,098	-		AO356_10965	0.86	+0.4
2,493,163	+				+0.7
2,493,163	+				+0.1
2,493,163	+				-0.8
2,493,163	+				-0.9
2,493,163	+				+0.4
2,493,163	+				+0.4
2,493,164	-				+0.0
2,493,164	-				-0.4
2,493,164	-				+1.0
2,493,164	-				+1.1
2,493,225	-				-0.7
2,493,225	-				-0.8
2,493,253	+				-0.6
2,493,302	-				+1.7
2,493,302	-				+0.7
2,493,331	+				-0.1
2,493,331	+				-0.1
2,493,332	-				+0.4
2,493,332	-				+0.4
2,493,332	-				+0.3
2,493,365	+				+0.2
2,493,365	+				+1.2
2,493,366	-				+0.0
2,493,482	-				+1.3
2,493,522	-				+0.4
2,493,522	-				-2.7
2,493,522	-				+1.0
2,493,528	-				+1.8
2,493,534	+				+0.2
2,493,534	+				-2.6
2,493,535	-				+0.7
2,493,802	+				-0.1
2,493,802	+				+0.1
2,493,803	-				-0.4
2,493,803	-				+0.8
2,493,803	-				+0.1
2,493,841	+				-0.6
2,493,841	+				-0.2
2,493,841	+				+0.4
2,493,841	+				+0.1
2,493,841	+				-0.4
2,493,841	+				+0.5
2,493,841	+				+1.0
2,493,841	+				+0.6
2,493,841	+				+0.5
2,493,841	+				-0.1
2,493,841	+				+0.2
2,493,841	+				+0.2
2,493,841	+				-0.2
2,493,841	+				+0.3
2,493,841	+				+0.6
2,493,841	+				+0.6
2,493,842	-				+0.7
2,493,842	-				-0.4
2,493,842	-				+0.9
2,493,842	-				+0.9
2,493,842	-				+0.4
2,493,842	-				+0.3
2,493,842	-				+0.5
2,493,842	-				+0.8
2,493,842	-				+1.3
2,493,842	-				+0.2
2,493,842	-				+0.7
2,493,842	-				+0.4
2,493,874	-				-0.2
2,493,891	-				+1.1
2,493,891	-				+0.4
2,493,891	-				-0.7
2,493,891	-				-0.0
2,493,891	-				+1.5
2,493,972	-				-0.3
2,493,972	-				-0.5
2,493,997	+				-0.3
2,493,997	+				+1.0
2,493,997	+				+0.1
2,493,998	-				-0.4
2,493,998	-				-0.4
2,493,998	-				+0.4
2,493,998	-				+0.4
2,494,198	+		AO356_10975	0.17	+0.5
2,494,198	+		AO356_10975	0.17	+1.0
2,494,204	-		AO356_10975	0.18	-0.0
2,494,221	-		AO356_10975	0.19	+0.4
2,494,221	-		AO356_10975	0.19	-0.8
2,494,292	+		AO356_10975	0.25	+1.1
2,494,292	+		AO356_10975	0.25	-0.8
2,494,292	+		AO356_10975	0.25	+0.2
2,494,292	+		AO356_10975	0.25	+0.4
2,494,292	+		AO356_10975	0.25	+0.6
2,494,292	+		AO356_10975	0.25	-0.2
2,494,292	+		AO356_10975	0.25	-0.3
2,494,292	+		AO356_10975	0.25	-0.8
2,494,292	+		AO356_10975	0.25	+1.1
2,494,292	+		AO356_10975	0.25	-0.4
2,494,292	+		AO356_10975	0.25	+0.0
2,494,292	+		AO356_10975	0.25	+0.7
2,494,292	+		AO356_10975	0.25	-0.1
2,494,292	+		AO356_10975	0.25	+1.0
2,494,292	+		AO356_10975	0.25	-0.5
2,494,292	+		AO356_10975	0.25	+0.9
2,494,292	+		AO356_10975	0.25	-1.2
2,494,293	-		AO356_10975	0.26	+0.4
2,494,293	-		AO356_10975	0.26	+0.6
2,494,293	-		AO356_10975	0.26	+0.1
2,494,293	-		AO356_10975	0.26	+0.7
2,494,293	-		AO356_10975	0.26	+0.9
2,494,293	-		AO356_10975	0.26	+0.8
2,494,293	-		AO356_10975	0.26	-0.0
2,494,293	-		AO356_10975	0.26	+0.7
2,494,293	-		AO356_10975	0.26	+0.6
2,494,337	+		AO356_10975	0.29	-0.1
2,494,337	+		AO356_10975	0.29	+1.3
2,494,337	+		AO356_10975	0.29	+0.6
2,494,337	+		AO356_10975	0.29	-0.3
2,494,337	+		AO356_10975	0.29	-0.8
2,494,337	+		AO356_10975	0.29	+0.1
2,494,337	+		AO356_10975	0.29	+0.2
2,494,337	+		AO356_10975	0.29	+1.0
2,494,337	+		AO356_10975	0.29	+0.8
2,494,337	+		AO356_10975	0.29	+1.0
2,494,338	-		AO356_10975	0.29	-0.1
2,494,338	-		AO356_10975	0.29	+1.5
2,494,338	-		AO356_10975	0.29	+0.8
2,494,338	-		AO356_10975	0.29	-1.0
2,494,338	-		AO356_10975	0.29	+0.7
2,494,341	+		AO356_10975	0.30	+0.2
2,494,341	+		AO356_10975	0.30	+0.7
2,494,341	+		AO356_10975	0.30	-0.5
2,494,342	-		AO356_10975	0.30	+1.1
2,494,342	-		AO356_10975	0.30	+1.2
2,494,342	-		AO356_10975	0.30	-2.5
2,494,342	-		AO356_10975	0.30	+1.2
2,494,342	-		AO356_10975	0.30	-0.0
2,494,342	-		AO356_10975	0.30	-0.2
2,494,642	+		AO356_10975	0.56	+1.1
2,494,642	+		AO356_10975	0.56	-0.1
2,494,642	+		AO356_10975	0.56	-0.0
2,494,643	-		AO356_10975	0.56	-0.8
2,494,643	-		AO356_10975	0.56	-0.7
2,494,643	-		AO356_10975	0.56	+0.5
2,494,751	+		AO356_10975	0.65	-0.6
2,494,751	+		AO356_10975	0.65	+1.1
2,494,752	-		AO356_10975	0.65	+1.7
2,494,850	+		AO356_10975	0.74	+1.4
2,494,850	+		AO356_10975	0.74	-0.6
2,494,851	-		AO356_10975	0.74	+0.5
2,494,851	-		AO356_10975	0.74	-1.1
2,495,027	+		AO356_10975	0.89	-0.3
2,495,028	-		AO356_10975	0.89	+0.6
2,495,028	-		AO356_10975	0.89	+0.4
2,495,103	+				+0.8
2,495,103	+				+0.3
2,495,103	+				+0.6
2,495,103	+				+1.3
2,495,104	-				+1.0
2,495,104	-				-1.0
2,495,105	+				-0.1
2,495,105	+				+0.5
2,495,106	-				-0.1
2,495,242	+		AO356_10980	0.41	-1.8
2,495,242	+		AO356_10980	0.41	+0.4
2,495,242	+		AO356_10980	0.41	+0.2
2,495,242	+		AO356_10980	0.41	-0.6
2,495,242	+		AO356_10980	0.41	+0.0
2,495,243	-		AO356_10980	0.42	-0.5
2,495,243	-		AO356_10980	0.42	-0.2
2,495,243	-		AO356_10980	0.42	-1.2
2,495,243	-		AO356_10980	0.42	+0.2
2,495,303	+		AO356_10980	0.77	+0.7
2,495,303	+		AO356_10980	0.77	+0.2
2,495,303	+		AO356_10980	0.77	+0.1
2,495,303	+		AO356_10980	0.77	-1.0
2,495,303	+		AO356_10980	0.77	+0.4
2,495,303	+		AO356_10980	0.77	+0.1
2,495,304	-		AO356_10980	0.78	+0.2
2,495,304	-		AO356_10980	0.78	-0.1
2,495,304	-		AO356_10980	0.78	-0.4
2,495,304	-		AO356_10980	0.78	-1.1
2,495,322	+		AO356_10980	0.89	+1.0
2,495,322	+		AO356_10980	0.89	+0.6
2,495,322	+		AO356_10980	0.89	+2.0
2,495,322	+		AO356_10980	0.89	-0.4
2,495,322	+		AO356_10980	0.89	+0.4
2,495,322	+		AO356_10980	0.89	-1.4
2,495,322	+		AO356_10980	0.89	+0.3
2,495,322	+		AO356_10980	0.89	+0.4
2,495,322	+		AO356_10980	0.89	-0.3
2,495,322	+		AO356_10980	0.89	-0.4
2,495,322	+		AO356_10980	0.89	-0.1
2,495,322	+		AO356_10980	0.89	-0.1
2,495,322	+		AO356_10980	0.89	+0.1
2,495,322	+		AO356_10980	0.89	+0.6
2,495,323	-		AO356_10980	0.89	-0.4
2,495,323	-		AO356_10980	0.89	+0.3
2,495,323	-		AO356_10980	0.89	-0.1
2,495,323	-		AO356_10980	0.89	-0.4
2,495,323	-		AO356_10980	0.89	-0.4
2,495,323	-		AO356_10980	0.89	-1.6
2,495,346	+				-1.4
2,495,346	+				-0.3
2,495,346	+				-0.4
2,495,346	+				-0.4
2,495,347	-				-0.3
2,495,347	-				+0.6
2,495,347	-				+0.8
2,495,347	-				+0.9
2,495,347	-				-1.4
2,495,347	-				+0.1
2,495,347	-				+0.3
2,495,347	-				-0.1
2,495,347	-				+0.8
2,495,377	-				-0.6
2,495,401	+				+0.8
2,495,401	+				+0.4
2,495,402	-				+0.8
2,495,402	-				-0.4
2,495,479	+				+0.2
2,495,479	+				-0.3
2,495,479	+				+0.1
2,495,479	+				+0.9
2,495,479	+				-0.7
2,495,479	+				-1.2
2,495,480	-				+1.1
2,495,480	-				+2.6
2,495,480	-				+2.2
2,495,480	-				+0.3
2,495,525	+				+1.4
2,495,526	-				+0.3
2,495,536	+				+0.4
2,495,543	+				-1.3
2,495,543	+				-0.6
2,495,543	+				+0.6
2,495,543	+				-0.1
2,495,763	+		AO356_10985	0.44	+0.6
2,495,763	+		AO356_10985	0.44	-0.1
2,495,763	+		AO356_10985	0.44	+0.5
2,495,763	+		AO356_10985	0.44	-0.1
2,495,763	+		AO356_10985	0.44	+0.1
2,495,763	+		AO356_10985	0.44	+0.6
2,495,763	+		AO356_10985	0.44	+1.4
2,495,764	-		AO356_10985	0.44	+0.8
2,495,764	-		AO356_10985	0.44	+1.2
2,495,764	-		AO356_10985	0.44	+1.2
2,495,764	-		AO356_10985	0.44	+1.3
2,495,764	-		AO356_10985	0.44	-0.4
2,496,063	+				+0.7
2,496,083	+				-0.3
2,496,083	+				+1.3
2,496,083	+				+0.3
2,496,083	+				+1.1
2,496,083	+				-0.2
2,496,083	+				+1.0