Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_09405

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,129,054	-		AO356_09395	0.83	+2.0
2,129,364	-				+0.6
2,129,549	+		AO356_09400	0.27	-0.8
2,129,549	+		AO356_09400	0.27	+0.2
2,129,549	+		AO356_09400	0.27	-0.4
2,129,549	+		AO356_09400	0.27	+0.3
2,129,549	+		AO356_09400	0.27	+1.2
2,129,550	-		AO356_09400	0.27	+0.8
2,129,550	-		AO356_09400	0.27	-0.0
2,129,550	-		AO356_09400	0.27	+0.4
2,129,550	-		AO356_09400	0.27	+0.7
2,129,626	-		AO356_09400	0.41	+0.1
2,129,667	-		AO356_09400	0.48	+1.0
2,129,777	+		AO356_09400	0.68	+0.7
2,129,777	+		AO356_09400	0.68	-1.5
2,129,777	+		AO356_09400	0.68	-0.1
2,129,778	-		AO356_09400	0.69	+0.6
2,129,778	-		AO356_09400	0.69	+0.0
2,129,778	-		AO356_09400	0.69	+0.1
2,129,778	-		AO356_09400	0.69	+0.7
2,129,778	-		AO356_09400	0.69	-0.2
2,129,778	-		AO356_09400	0.69	+0.8
2,129,778	-		AO356_09400	0.69	+0.2
2,129,781	+		AO356_09400	0.69	+0.3
2,129,781	+		AO356_09400	0.69	+0.7
2,129,781	+		AO356_09400	0.69	+0.3
2,129,781	+		AO356_09400	0.69	-0.0
2,129,782	-		AO356_09400	0.69	+1.0
2,129,782	-		AO356_09400	0.69	+0.4
2,129,782	-		AO356_09400	0.69	-0.0
2,129,782	-		AO356_09400	0.69	+0.7
2,129,792	+		AO356_09400	0.71	+0.2
2,129,855	+		AO356_09400	0.83	+0.5
2,129,855	+		AO356_09400	0.83	-0.4
2,129,855	+		AO356_09400	0.83	-0.1
2,129,855	+		AO356_09400	0.83	+0.6
2,129,855	+		AO356_09400	0.83	+1.3
2,129,856	-		AO356_09400	0.83	+0.7
2,129,856	-		AO356_09400	0.83	-0.4
2,129,856	-		AO356_09400	0.83	+1.5
2,129,856	-		AO356_09400	0.83	+0.6
2,129,856	-		AO356_09400	0.83	+1.1
2,129,856	-		AO356_09400	0.83	+0.7
2,129,971	+				+0.3
2,129,971	+				+0.6
2,129,971	+				+0.3
2,129,971	+				-0.4
2,129,971	+				+0.7
2,129,977	+				+0.0
2,129,978	-				+1.5
2,129,978	-				+0.4
2,129,978	-				-0.2
2,130,148	+		AO356_09405	0.32	+0.7
2,130,149	-		AO356_09405	0.33	+2.0
2,130,149	-		AO356_09405	0.33	+0.9
2,130,149	-		AO356_09405	0.33	-0.5
2,130,149	-		AO356_09405	0.33	-0.7
2,130,276	+		AO356_09405	0.53	+0.7
2,130,276	+		AO356_09405	0.53	-0.8
2,130,277	-		AO356_09405	0.53	+0.5
2,130,277	-		AO356_09405	0.53	+0.7
2,130,277	-		AO356_09405	0.53	+0.1
2,130,277	-		AO356_09405	0.53	+0.2
2,130,277	-		AO356_09405	0.53	+0.6
2,130,277	-		AO356_09405	0.53	+0.8
2,130,277	-		AO356_09405	0.53	+0.8
2,130,277	-		AO356_09405	0.53	+0.3
2,130,277	-		AO356_09405	0.53	+0.4
2,130,277	-		AO356_09405	0.53	+0.8
2,130,316	+		AO356_09405	0.59	-0.7
2,130,316	+		AO356_09405	0.59	+1.4
2,130,317	-		AO356_09405	0.59	+0.9
2,130,317	-		AO356_09405	0.59	+0.5
2,130,372	-		AO356_09405	0.68	+0.7
2,130,428	+		AO356_09405	0.77	+0.5
2,130,428	+		AO356_09405	0.77	+0.6
2,130,429	-		AO356_09405	0.77	+0.3
2,130,429	-		AO356_09405	0.77	+0.7
2,130,429	-		AO356_09405	0.77	-0.5
2,130,430	+		AO356_09405	0.78	+0.5
2,130,431	-		AO356_09405	0.78	+0.8
2,130,792	+		AO356_09410	0.40	-0.3
2,130,792	+		AO356_09410	0.40	+1.4
2,130,792	+		AO356_09410	0.40	-0.6
2,130,792	+		AO356_09410	0.40	+0.0
2,130,792	+		AO356_09410	0.40	+0.6
2,130,792	+		AO356_09410	0.40	-0.3
2,130,793	-		AO356_09410	0.40	+0.4
2,130,793	-		AO356_09410	0.40	+1.3
2,130,793	-		AO356_09410	0.40	+0.7
2,130,793	-		AO356_09410	0.40	-1.8
2,130,793	-		AO356_09410	0.40	+0.4
2,130,970	+		AO356_09410	0.71	+0.3
2,130,970	+		AO356_09410	0.71	+0.4
2,130,971	-		AO356_09410	0.71	+1.2
2,131,008	+		AO356_09410	0.78	-1.1
2,131,009	-		AO356_09410	0.78	+0.6
2,131,009	-		AO356_09410	0.78	-0.3
2,131,009	-		AO356_09410	0.78	+0.6
2,131,233	+				-1.0
2,131,344	-		AO356_09415	0.20	+0.8
2,131,431	-		AO356_09415	0.28	+1.4
2,131,431	-		AO356_09415	0.28	+0.4
2,131,431	-		AO356_09415	0.28	+0.9
2,131,545	+		AO356_09415	0.39	-0.6
2,131,547	+		AO356_09415	0.39	-1.7
2,131,547	+		AO356_09415	0.39	-0.3
2,131,547	+		AO356_09415	0.39	+0.6
2,131,547	+		AO356_09415	0.39	+1.2
2,131,547	+		AO356_09415	0.39	-1.1
2,131,547	+		AO356_09415	0.39	+0.6
2,131,547	+		AO356_09415	0.39	-0.2
2,131,547	+		AO356_09415	0.39	+0.7
2,131,547	+		AO356_09415	0.39	-1.2
2,131,547	+		AO356_09415	0.39	-0.0
2,131,547	+		AO356_09415	0.39	-1.2
2,131,547	+		AO356_09415	0.39	+0.1
2,131,548	-		AO356_09415	0.39	+1.4
2,131,548	-		AO356_09415	0.39	-0.2
2,131,548	-		AO356_09415	0.39	-0.2
2,131,548	-		AO356_09415	0.39	+1.0
2,131,548	-		AO356_09415	0.39	+0.1
2,131,548	-		AO356_09415	0.39	+0.8
2,131,548	-		AO356_09415	0.39	-0.1
2,131,548	-		AO356_09415	0.39	+1.1
2,131,548	-		AO356_09415	0.39	+1.2
2,131,548	-		AO356_09415	0.39	-0.7