Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_08530

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,917,910	+				+1.2
1,918,137	+		AO356_08525	0.29	-0.2
1,918,137	+		AO356_08525	0.29	+1.2
1,918,137	+		AO356_08525	0.29	+0.3
1,918,138	-		AO356_08525	0.29	+0.8
1,918,139	+		AO356_08525	0.29	+1.3
1,918,139	+		AO356_08525	0.29	+1.8
1,918,139	+		AO356_08525	0.29	+1.5
1,918,139	+		AO356_08525	0.29	+2.2
1,918,139	+		AO356_08525	0.29	-0.5
1,918,140	-		AO356_08525	0.29	+1.5
1,918,140	-		AO356_08525	0.29	+0.5
1,918,140	-		AO356_08525	0.29	+0.7
1,918,140	-		AO356_08525	0.29	+2.0
1,918,140	-		AO356_08525	0.29	-0.8
1,918,242	-		AO356_08525	0.41	+1.2
1,918,242	-		AO356_08525	0.41	+0.2
1,918,359	+		AO356_08525	0.55	+1.5
1,918,359	+		AO356_08525	0.55	-0.0
1,918,359	+		AO356_08525	0.55	-0.3
1,918,359	+		AO356_08525	0.55	+0.9
1,918,360	-		AO356_08525	0.56	+0.1
1,918,360	-		AO356_08525	0.56	+1.8
1,918,360	-		AO356_08525	0.56	+1.6
1,918,611	+		AO356_08525	0.86	-0.3
1,918,611	+		AO356_08525	0.86	+1.0
1,918,611	+		AO356_08525	0.86	-0.3
1,918,611	+		AO356_08525	0.86	+0.2
1,918,612	-		AO356_08525	0.86	-2.6
1,918,612	-		AO356_08525	0.86	+0.1
1,918,612	-		AO356_08525	0.86	-0.2
1,918,683	+				+0.3
1,918,683	+				-0.4
1,918,683	+				+1.6
1,918,683	+				+0.3
1,918,683	+				+0.3
1,918,857	-				-0.7
1,918,937	+				+0.8
1,918,937	+				-0.9
1,918,937	+				+0.1
1,918,937	+				-0.1
1,919,074	+		AO356_08530	0.38	-0.4
1,919,074	+		AO356_08530	0.38	+0.8
1,919,074	+		AO356_08530	0.38	+0.9
1,919,074	+		AO356_08530	0.38	+0.3
1,919,075	-		AO356_08530	0.39	+0.7
1,919,075	-		AO356_08530	0.39	-0.4
1,919,150	+		AO356_08530	0.55	-0.6
1,919,151	-		AO356_08530	0.56	+0.7
1,919,151	-		AO356_08530	0.56	+1.3
1,919,326	-				+0.5
1,919,326	-				-0.9
1,919,450	+				-0.0
1,919,457	-				+0.9
1,919,473	+				+0.8
1,919,474	-				-2.4
1,919,474	-				-0.2
1,919,474	-				-0.2
1,919,491	+				+1.1
1,919,491	+				+0.2
1,919,491	+				-0.2
1,919,491	+				-0.0
1,919,492	-				+0.8
1,919,492	-				-1.5
1,919,504	+				-0.1
1,919,504	+				-0.4
1,919,504	+				+0.1
1,919,504	+				+0.1
1,919,505	-				+0.0
1,919,505	-				+0.2
1,919,505	-				-0.3
1,919,550	+				-0.2
1,919,558	+				+0.0
1,919,558	+				-0.2
1,919,578	+				-0.3
1,919,602	+				+0.8
1,919,602	+				+0.5
1,919,602	+				-0.7
1,919,602	+				-0.1
1,919,603	-				+0.6
1,919,603	-				+0.1
1,919,603	-				+1.1
1,919,626	+				+0.6
1,919,626	+				-0.0
1,919,626	+				+0.5
1,919,626	+				+1.0
1,919,626	+				+0.6
1,919,626	+				-0.8
1,919,627	-				+0.4
1,919,644	+				-0.1
1,919,645	-				+0.3
1,919,645	-				-0.4
1,919,645	-				-0.3
1,919,645	-				-0.4
1,919,656	+				-1.1
1,919,657	-				+0.1
1,919,657	-				-0.6
1,919,684	+				-0.4
1,919,684	+				+0.0
1,919,684	+				+1.7
1,919,685	-				+0.3
1,919,685	-				-0.6
1,919,685	-				-0.1
1,919,685	-				+0.4
1,919,747	+				-0.5
1,919,747	+				-0.0
1,919,748	-				+0.1
1,920,110	+		AO356_08535	0.71	-2.0
1,920,139	+		AO356_08535	0.76	-0.5
1,920,139	+		AO356_08535	0.76	-1.0
1,920,139	+		AO356_08535	0.76	-0.4
1,920,139	+		AO356_08535	0.76	+0.7
1,920,140	-		AO356_08535	0.77	-2.6
1,920,140	-		AO356_08535	0.77	+0.6
1,920,243	+				+0.3
1,920,243	+				+0.3
1,920,244	-				+0.0
1,920,244	-				+0.2
1,920,304	+				-0.7
1,920,304	+				+0.4
1,920,305	-				+1.2
1,920,305	-				-0.5
1,920,305	-				+0.3
1,920,305	-				-0.6